RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 TWIST1Q15672 202 aa9.35□□□□□ -0.91
TPM1-230ENST00000561266 FAM74A3Q4VXF1 159 aa9.35□□□□□ -0.91
TPM1-230ENST00000561266 CT83Q5H943 113 aa9.35□□□□□ -0.91
TPM1-230ENST00000561266 NTM-AS1Q6ZSK4 140 aa9.35□□□□□ -0.91
TPM1-230ENST00000561266 RPL36ALQ969Q0 106 aaKnown RBP9.35□□□□□ -0.91
TPM1-230ENST00000561266 NAT8Q9UHE5 227 aa9.35□□□□□ -0.91
TPM1-230ENST00000561266 TRAV26-2A0A0B4J265 109 aa9.34□□□□□ -0.91
TPM1-230ENST00000561266 SMIM17P0DL12 118 aa9.34□□□□□ -0.91
TPM1-230ENST00000561266 ADIRFQ15847 76 aa9.34□□□□□ -0.91
TPM1-230ENST00000561266 DEFB104AQ8WTQ1 72 aa9.34□□□□□ -0.91
TPM1-230ENST00000561266 TSKUQ8WUA8 353 aa9.34□□□□□ -0.91
TPM1-230ENST00000561266 DNAJC30Q96LL9 226 aa9.34□□□□□ -0.91
TPM1-230ENST00000561266 DPH3P1Q9H4G8 78 aa9.34□□□□□ -0.91
TPM1-230ENST00000561266 HIGD1CA8MV81 97 aa9.33□□□□□ -0.92
TPM1-230ENST00000561266 GAS8-AS1O95177 125 aa9.33□□□□□ -0.92
TPM1-230ENST00000561266 TRGC1P0CF51 173 aa9.33□□□□□ -0.92
TPM1-230ENST00000561266 FUSP35637 526 aaKnown RBP eCLIP9.33□□□□□ -0.92
TPM1-230ENST00000561266 DAZ4Q86SG3 579 aaKnown RBP9.33□□□□□ -0.92
TPM1-230ENST00000561266 GATD1Q8NB37 220 aa9.33□□□□□ -0.92
TPM1-230ENST00000561266 SMDT1Q9H4I9 107 aa9.33□□□□□ -0.92
TPM1-230ENST00000561266 DAZ3Q9NR90 486 aaKnown RBP9.33□□□□□ -0.92
TPM1-230ENST00000561266 IBA57-AS1B1ANH7 110 aa9.32□□□□□ -0.92
TPM1-230ENST00000561266 KRTAP10-2P60368 255 aa9.32□□□□□ -0.92
TPM1-230ENST00000561266 CLLU1Q5K131 121 aa9.32□□□□□ -0.92
TPM1-230ENST00000561266 NIT1Q86X76 327 aa9.32□□□□□ -0.92
TPM1-230ENST00000561266 TRAV9-2A0A087WT02 112 aa9.31□□□□□ -0.92
TPM1-230ENST00000561266 BTF3P20290 206 aaKnown RBP9.31□□□□□ -0.92
TPM1-230ENST00000561266 NUP35Q8NFH5 326 aa9.31□□□□□ -0.92
TPM1-230ENST00000561266 A0A087WWC5 75 aa9.3□□□□□ -0.92
TPM1-230ENST00000561266 TRBV6-8A0A0A6YYG3 113 aa9.3□□□□□ -0.92
TPM1-230ENST00000561266 RAB14P61106 215 aa9.3□□□□□ -0.92
TPM1-230ENST00000561266 RASL11AQ6T310 242 aa9.3□□□□□ -0.92
TPM1-230ENST00000561266 RPL39LQ96EH5 51 aaKnown RBP9.3□□□□□ -0.92
TPM1-230ENST00000561266 RNF185Q96GF1 192 aa9.3□□□□□ -0.92
TPM1-230ENST00000561266 GFRA4Q9GZZ7 299 aa9.3□□□□□ -0.92
TPM1-230ENST00000561266 Q9HAA7 133 aa9.3□□□□□ -0.92
TPM1-230ENST00000561266 DNAH5Q8TE73 4624 aa9.29□□□□□ -0.92
TPM1-230ENST00000561266 K7EP13 123 aa9.29□□□□□ -0.92
TPM1-230ENST00000561266 C15orf54Q8N8G6 183 aa9.29□□□□□ -0.92
TPM1-230ENST00000561266 NIT2Q9NQR4 276 aa9.29□□□□□ -0.92
TPM1-230ENST00000561266 A0A1B0GUT8 65 aa9.28□□□□□ -0.92
TPM1-230ENST00000561266 SMIM27A0A1W2PRY6 76 aa9.28□□□□□ -0.92
TPM1-230ENST00000561266 FAM231BA6NCW3 169 aa9.28□□□□□ -0.92
TPM1-230ENST00000561266 SPATA12Q7Z6I5 190 aa9.28□□□□□ -0.92
TPM1-230ENST00000561266 C10orf126Q8N4M7 172 aa9.28□□□□□ -0.92
TPM1-230ENST00000561266 LRCOL1A6NCL2 159 aa9.27□□□□□ -0.93
TPM1-230ENST00000561266 MPV17L2Q567V2 206 aa9.27□□□□□ -0.93
TPM1-230ENST00000561266 MAPKAPK5-AS1Q8N8E1 139 aa9.27□□□□□ -0.93
TPM1-230ENST00000561266 LRP1BQ9NZR2 4599 aa9.27□□□□□ -0.93
TPM1-230ENST00000561266 A0A087WTM6 91 aa9.26□□□□□ -0.93
TPM1-230ENST00000561266 H7C1H1 209 aa9.26□□□□□ -0.93
TPM1-230ENST00000561266 ADCYAP1P18509 176 aa9.26□□□□□ -0.93
TPM1-230ENST00000561266 RAB4AP20338 218 aa9.26□□□□□ -0.93
TPM1-230ENST00000561266 WFDC2Q14508 124 aa9.26□□□□□ -0.93
TPM1-230ENST00000561266 NFE4Q86UQ8 179 aa9.26□□□□□ -0.93
TPM1-230ENST00000561266 AMN1Q8IY45 258 aa9.26□□□□□ -0.93
TPM1-230ENST00000561266 TMEM191AQ9H0A3 160 aa9.26□□□□□ -0.93
TPM1-230ENST00000561266 KLK12Q9UKR0 248 aa9.26□□□□□ -0.93
TPM1-230ENST00000561266 RPS10P46783 165 aaKnown RBP9.25□□□□□ -0.93
TPM1-230ENST00000561266 GAGE6Q13070 117 aa9.25□□□□□ -0.93
TPM1-230ENST00000561266 ATRAIDQ6UW56 229 aa9.25□□□□□ -0.93
TPM1-230ENST00000561266 Q8N976 141 aa9.25□□□□□ -0.93
TPM1-230ENST00000561266 CHCHD5Q9BSY4 110 aa9.25□□□□□ -0.93
TPM1-230ENST00000561266 KRTAP17-1Q9BYP8 105 aa9.25□□□□□ -0.93
TPM1-230ENST00000561266 NAT8BQ9UHF3 227 aa9.25□□□□□ -0.93
TPM1-230ENST00000561266 KIAA1109Q2LD37 5005 aa9.24□□□□□ -0.93
TPM1-230ENST00000561266 TMEM262E9PQX1 116 aa9.24□□□□□ -0.93
TPM1-230ENST00000561266 SMKR1H3BMG3 65 aa9.24□□□□□ -0.93
TPM1-230ENST00000561266 LAGE3Q14657 143 aa9.24□□□□□ -0.93
TPM1-230ENST00000561266 IQCJQ1A5X6 159 aa9.24□□□□□ -0.93
TPM1-230ENST00000561266 ENHOQ6UWT2 76 aa9.24□□□□□ -0.93
TPM1-230ENST00000561266 RIGQ13278 110 aa9.23□□□□□ -0.93
TPM1-230ENST00000561266 SMIM15Q7Z3B0 74 aa9.23□□□□□ -0.93
TPM1-230ENST00000561266 BORCS7Q96B45 105 aa9.23□□□□□ -0.93
TPM1-230ENST00000561266 A0A087WX48 190 aa9.22□□□□□ -0.93
TPM1-230ENST00000561266 IGHV1-24A0A0C4DH33 117 aa9.22□□□□□ -0.93
TPM1-230ENST00000561266 A0A1B0GXF2 115 aa9.22□□□□□ -0.93
TPM1-230ENST00000561266 C16orf90A8MZG2 172 aa9.22□□□□□ -0.93
TPM1-230ENST00000561266 NCR2O95944 276 aa9.22□□□□□ -0.93
TPM1-230ENST00000561266 RBX1P62877 108 aa9.22□□□□□ -0.93
TPM1-230ENST00000561266 UBE2WQ96B02 151 aa9.22□□□□□ -0.93
TPM1-230ENST00000561266 URGCP-MRPS24S4R325 110 aa9.22□□□□□ -0.93
TPM1-230ENST00000561266 IGLV4-60A0A075B6I1 120 aa9.21□□□□□ -0.94
TPM1-230ENST00000561266 TRBV25-1A0A075B6N4 114 aa9.21□□□□□ -0.94
TPM1-230ENST00000561266 TRBV6-5A0A0K0K1A5 114 aa9.21□□□□□ -0.94
TPM1-230ENST00000561266 CAMPP49913 170 aa9.21□□□□□ -0.94
TPM1-230ENST00000561266 MRPL51Q4U2R6 128 aaKnown RBP9.21□□□□□ -0.94
TPM1-230ENST00000561266 TMEM97Q5BJF2 176 aa9.21□□□□□ -0.94
TPM1-230ENST00000561266 MRPL54Q6P161 138 aaKnown RBP9.21□□□□□ -0.94
TPM1-230ENST00000561266 CHCHD7Q9BUK0 85 aa9.21□□□□□ -0.94
TPM1-230ENST00000561266 HERC2O95714 4834 aa9.21□□□□□ -0.94
TPM1-230ENST00000561266 TMEM218A2RU14 115 aa9.2□□□□□ -0.94
TPM1-230ENST00000561266 SDHAF1A6NFY7 115 aa9.2□□□□□ -0.94
TPM1-230ENST00000561266 LECT2O14960 151 aa9.2□□□□□ -0.94
TPM1-230ENST00000561266 FAM104BQ5XKR9 115 aa9.2□□□□□ -0.94
TPM1-230ENST00000561266 CLPSL2Q6UWE3 100 aa9.2□□□□□ -0.94
TPM1-230ENST00000561266 COMMD7Q86VX2 200 aa9.2□□□□□ -0.94
TPM1-230ENST00000561266 NRACQ8N912 160 aa9.2□□□□□ -0.94
TPM1-230ENST00000561266 C20orf203Q8NBC4 194 aa9.2□□□□□ -0.94
TPM1-230ENST00000561266 FRZBQ92765 325 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms