RNA–Protein interactions for RNA: ENST00000560634.1

CSPG4P11-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 11, humanhuman

BASIC

Gene CSPG4P11, Length 4,910 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P11-201ENST00000560634 NCR3O14931 201 aa10.1□□□□□ -0.79
CSPG4P11-201ENST00000560634 WT1P19544 449 aaPredicted RBP10.1□□□□□ -0.79
CSPG4P11-201ENST00000560634 MIAQ16674 131 aa10.1□□□□□ -0.79
CSPG4P11-201ENST00000560634 ODF3L1Q8IXM7 274 aa10.1□□□□□ -0.79
CSPG4P11-201ENST00000560634 ANKHD1Q8IWZ3 2542 aaKnown RBP10.1□□□□□ -0.79
CSPG4P11-201ENST00000560634 A0A1B0GXF2 115 aa10.1□□□□□ -0.79
CSPG4P11-201ENST00000560634 C4orf48Q5BLP8 95 aa10.1□□□□□ -0.79
CSPG4P11-201ENST00000560634 MYO18BQ8IUG5 2567 aa10.1□□□□□ -0.79
CSPG4P11-201ENST00000560634 HELZP42694 1942 aaKnown RBP10.09□□□□□ -0.79
CSPG4P11-201ENST00000560634 Q8N7P7 452 aa10.09□□□□□ -0.79
CSPG4P11-201ENST00000560634 MDFICQ9P1T7 246 aa10.09□□□□□ -0.79
CSPG4P11-201ENST00000560634 COX7BP24311 80 aa10.09□□□□□ -0.79
CSPG4P11-201ENST00000560634 KLK12Q9UKR0 248 aa10.09□□□□□ -0.79
CSPG4P11-201ENST00000560634 INSL3P51460 131 aa10.09□□□□□ -0.79
CSPG4P11-201ENST00000560634 HIST2H2BDQ6DRA6 164 aa10.09□□□□□ -0.79
CSPG4P11-201ENST00000560634 SEM1Q6ZVN7 128 aa10.09□□□□□ -0.79
CSPG4P11-201ENST00000560634 FANCD2OSQ96PS1 177 aa10.09□□□□□ -0.79
CSPG4P11-201ENST00000560634 C11orf1Q9H5F2 150 aa10.09□□□□□ -0.79
CSPG4P11-201ENST00000560634 CSPG4Q6UVK1 2322 aa10.09□□□□□ -0.79
CSPG4P11-201ENST00000560634 COL4A6Q14031 1691 aa10.08□□□□□ -0.8
CSPG4P11-201ENST00000560634 IGLV2-14P01704 120 aa10.08□□□□□ -0.8
CSPG4P11-201ENST00000560634 HIVEP2P31629 2446 aa10.08□□□□□ -0.8
CSPG4P11-201ENST00000560634 KMT2EQ8IZD2 1858 aa10.08□□□□□ -0.8
CSPG4P11-201ENST00000560634 ESM1Q9NQ30 184 aa10.08□□□□□ -0.8
CSPG4P11-201ENST00000560634 PLXNA2O75051 1894 aa10.07□□□□□ -0.8
CSPG4P11-201ENST00000560634 SRCAPQ6ZRS2 3230 aa10.07□□□□□ -0.8
CSPG4P11-201ENST00000560634 C4orf3Q8WVX3 66 aa10.07□□□□□ -0.8
CSPG4P11-201ENST00000560634 F8W735 103 aaPredicted RBP10.07□□□□□ -0.8
CSPG4P11-201ENST00000560634 UFSP1Q6NVU6 142 aa10.07□□□□□ -0.8
CSPG4P11-201ENST00000560634 E7EUB6 86 aa10.07□□□□□ -0.8
CSPG4P11-201ENST00000560634 ODF3Q96PU9 254 aa10.07□□□□□ -0.8
CSPG4P11-201ENST00000560634 TICRRQ7Z2Z1 1910 aa10.07□□□□□ -0.8
CSPG4P11-201ENST00000560634 TNRC6AQ8NDV7 1962 aaKnown RBP10.06□□□□□ -0.8
CSPG4P11-201ENST00000560634 SIRPDQ9H106 197 aa10.06□□□□□ -0.8
CSPG4P11-201ENST00000560634 FRMD6-AS1P0C7T7 363 aa10.06□□□□□ -0.8
CSPG4P11-201ENST00000560634 P0C879 139 aa10.06□□□□□ -0.8
CSPG4P11-201ENST00000560634 ZFHX2Q9C0A1 2572 aaPredicted RBP10.06□□□□□ -0.8
CSPG4P11-201ENST00000560634 UQCRQO14949 82 aa10.06□□□□□ -0.8
CSPG4P11-201ENST00000560634 FBXL19-AS1Q494R0 122 aa10.06□□□□□ -0.8
CSPG4P11-201ENST00000560634 PTH2Q96A98 100 aa10.06□□□□□ -0.8
CSPG4P11-201ENST00000560634 BPY2O14599 106 aa10.06□□□□□ -0.8
CSPG4P11-201ENST00000560634 SEC61GP60059 68 aa10.05□□□□□ -0.8
CSPG4P11-201ENST00000560634 Q6ZUT4 128 aa10.05□□□□□ -0.8
CSPG4P11-201ENST00000560634 A0A0J9YXY3 114 aa10.05□□□□□ -0.8
CSPG4P11-201ENST00000560634 ZFP36P26651 326 aaKnown RBP10.05□□□□□ -0.8
CSPG4P11-201ENST00000560634 DEFB135Q30KP9 77 aa10.05□□□□□ -0.8
CSPG4P11-201ENST00000560634 NFE4Q86UQ8 179 aa10.05□□□□□ -0.8
CSPG4P11-201ENST00000560634 IGKV1D-37A0A075B6S9 117 aa10.04□□□□□ -0.8
CSPG4P11-201ENST00000560634 TCL1BO95988 128 aa10.04□□□□□ -0.8
CSPG4P11-201ENST00000560634 PRB2P02812 416 aaPredicted RBP10.04□□□□□ -0.8
CSPG4P11-201ENST00000560634 UNQ9165/PRO28630Q6UXU0 137 aa10.04□□□□□ -0.8
CSPG4P11-201ENST00000560634 A6NDX4 124 aa10.04□□□□□ -0.8
CSPG4P11-201ENST00000560634 ADORA2A-AS1P86434 159 aa10.04□□□□□ -0.8
CSPG4P11-201ENST00000560634 ATP5EP2Q5VTU8 51 aa10.04□□□□□ -0.8
CSPG4P11-201ENST00000560634 LINC00574Q9H8X3 128 aa10.04□□□□□ -0.8
CSPG4P11-201ENST00000560634 SMAD5-AS1Q9Y6J3 95 aa10.04□□□□□ -0.8
CSPG4P11-201ENST00000560634 IGLC6P0CF74 106 aa10.03□□□□□ -0.8
CSPG4P11-201ENST00000560634 IGKV2D-26A0A0A0MRZ7 120 aa10.03□□□□□ -0.8
CSPG4P11-201ENST00000560634 NDUFV3P56181 108 aaKnown RBP10.03□□□□□ -0.8
CSPG4P11-201ENST00000560634 TSC2P49815 1807 aa10.03□□□□□ -0.8
CSPG4P11-201ENST00000560634 MUC6Q6W4X9 2439 aa10.03□□□□□ -0.8
CSPG4P11-201ENST00000560634 H0Y9J4 135 aa10.03□□□□□ -0.8
CSPG4P11-201ENST00000560634 C14orf177Q52M58 125 aa10.03□□□□□ -0.8
CSPG4P11-201ENST00000560634 MLST8Q9BVC4 326 aa10.03□□□□□ -0.8
CSPG4P11-201ENST00000560634 KIAA1671Q9BY89 1806 aa10.03□□□□□ -0.8
CSPG4P11-201ENST00000560634 FREM1Q5H8C1 2179 aa10.03□□□□□ -0.8
CSPG4P11-201ENST00000560634 KLK5Q9Y337 293 aaPredicted RBP10.02□□□□□ -0.8
CSPG4P11-201ENST00000560634 IGLV2-8P01709 118 aa10.02□□□□□ -0.81
CSPG4P11-201ENST00000560634 DEFB1P60022 68 aa10.02□□□□□ -0.81
CSPG4P11-201ENST00000560634 BRK1Q8WUW1 75 aa10.02□□□□□ -0.81
CSPG4P11-201ENST00000560634 B9D2Q9BPU9 175 aa10.02□□□□□ -0.81
CSPG4P11-201ENST00000560634 FAM110AQ9BQ89 295 aa10.02□□□□□ -0.81
CSPG4P11-201ENST00000560634 LOXL1Q08397 574 aaPredicted RBP10.02□□□□□ -0.81
CSPG4P11-201ENST00000560634 UPK3BQ9BT76 320 aa10.02□□□□□ -0.81
CSPG4P11-201ENST00000560634 MAP6D1Q9H9H5 199 aa10.01□□□□□ -0.81
CSPG4P11-201ENST00000560634 ZFAND2AQ8N6M9 145 aa10.01□□□□□ -0.81
CSPG4P11-201ENST00000560634 H7C423 109 aa10.01□□□□□ -0.81
CSPG4P11-201ENST00000560634 TNFRSF13BO14836 293 aaPredicted RBP10.01□□□□□ -0.81
CSPG4P11-201ENST00000560634 ZNF80P51504 273 aaPredicted RBP10.01□□□□□ -0.81
CSPG4P11-201ENST00000560634 RNF183Q96D59 192 aa10.01□□□□□ -0.81
CSPG4P11-201ENST00000560634 SVIPQ8NHG7 77 aa10.01□□□□□ -0.81
CSPG4P11-201ENST00000560634 NCKAP5O14513 1909 aa10□□□□□ -0.81
CSPG4P11-201ENST00000560634 SPRY4Q9C004 299 aa10□□□□□ -0.81
CSPG4P11-201ENST00000560634 TRAV23DV6A0A075B6W5 121 aa10□□□□□ -0.81
CSPG4P11-201ENST00000560634 SPANXB1Q9NS25 103 aaPredicted RBP10□□□□□ -0.81
CSPG4P11-201ENST00000560634 NEXN-AS1Q8NBZ9 246 aa9.99□□□□□ -0.81
CSPG4P11-201ENST00000560634 SMIM9A6NGZ8 99 aa9.99□□□□□ -0.81
CSPG4P11-201ENST00000560634 CEMP1Q6PRD7 247 aaPredicted RBP9.99□□□□□ -0.81
CSPG4P11-201ENST00000560634 MBD6Q96DN6 1003 aa9.99□□□□□ -0.81
CSPG4P11-201ENST00000560634 CCDC140Q96MF4 163 aa9.99□□□□□ -0.81
CSPG4P11-201ENST00000560634 NLRC5Q86WI3 1866 aa9.99□□□□□ -0.81
CSPG4P11-201ENST00000560634 LINC00322Q6ZN03 302 aaPredicted RBP9.99□□□□□ -0.81
CSPG4P11-201ENST00000560634 C20orf197Q8N268 126 aa9.99□□□□□ -0.81
CSPG4P11-201ENST00000560634 IBA57-AS1B1ANH7 110 aa9.98□□□□□ -0.81
CSPG4P11-201ENST00000560634 PLXND1Q9Y4D7 1925 aa9.98□□□□□ -0.81
CSPG4P11-201ENST00000560634 MSMPQ1L6U9 139 aa9.98□□□□□ -0.81
CSPG4P11-201ENST00000560634 IL17DQ8TAD2 202 aa9.98□□□□□ -0.81
CSPG4P11-201ENST00000560634 C2CD3Q4AC94 2353 aa9.98□□□□□ -0.81
CSPG4P11-201ENST00000560634 FAM236DA0A1B0GTK5 79 aa9.97□□□□□ -0.81
CSPG4P11-201ENST00000560634 ODF3BA8MYP8 253 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms