RNA–Protein interactions for RNA: ENST00000560514.1

TSPAN3-208, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 638 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-208ENST00000560514 SDIM1Q6ZPB5 146 aa11.38□□□□□ -0.59
TSPAN3-208ENST00000560514 ZFP82Q8N141 532 aa11.38□□□□□ -0.59
TSPAN3-208ENST00000560514 GRIFINA4D1Z8 144 aa11.37□□□□□ -0.59
TSPAN3-208ENST00000560514 SFT2D1Q8WV19 159 aa11.37□□□□□ -0.59
TSPAN3-208ENST00000560514 TRBV7-3A0A075B6L6 115 aa11.36□□□□□ -0.59
TSPAN3-208ENST00000560514 PAGE4O60829 102 aa11.36□□□□□ -0.59
TSPAN3-208ENST00000560514 CXCL1P09341 107 aa11.36□□□□□ -0.59
TSPAN3-208ENST00000560514 AKR1C3P42330 323 aa11.36□□□□□ -0.59
TSPAN3-208ENST00000560514 PKIAP61925 76 aa11.36□□□□□ -0.59
TSPAN3-208ENST00000560514 EIF5AP63241 154 aaKnown RBP11.36□□□□□ -0.59
TSPAN3-208ENST00000560514 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.36□□□□□ -0.59
TSPAN3-208ENST00000560514 CLRN3Q8NCR9 226 aa11.36□□□□□ -0.59
TSPAN3-208ENST00000560514 A0A087WWL8 130 aa11.35□□□□□ -0.59
TSPAN3-208ENST00000560514 TRBV6-8A0A0A6YYG3 113 aa11.35□□□□□ -0.59
TSPAN3-208ENST00000560514 UBE2D3P61077 147 aa11.35□□□□□ -0.59
TSPAN3-208ENST00000560514 UBE2D2P62837 147 aa11.35□□□□□ -0.59
TSPAN3-208ENST00000560514 MPV17L2Q567V2 206 aa11.35□□□□□ -0.59
TSPAN3-208ENST00000560514 C7orf33Q8WU49 177 aa11.35□□□□□ -0.59
TSPAN3-208ENST00000560514 RNF185Q96GF1 192 aa11.35□□□□□ -0.59
TSPAN3-208ENST00000560514 MLST8Q9BVC4 326 aa11.35□□□□□ -0.59
TSPAN3-208ENST00000560514 LINC01600Q96MT4 127 aa11.34□□□□□ -0.59
TSPAN3-208ENST00000560514 CHCHD5Q9BSY4 110 aa11.34□□□□□ -0.59
TSPAN3-208ENST00000560514 IGHV3-64A0A075B6Q5 118 aa11.33□□□□□ -0.6
TSPAN3-208ENST00000560514 M0R381 172 aa11.33□□□□□ -0.6
TSPAN3-208ENST00000560514 RAB4BP61018 213 aa11.33□□□□□ -0.6
TSPAN3-208ENST00000560514 BAGE2Q86Y30 109 aa11.33□□□□□ -0.6
TSPAN3-208ENST00000560514 OR10G8Q8NGN5 311 aa11.33□□□□□ -0.6
TSPAN3-208ENST00000560514 SSBP4Q9BWG4 385 aaPredicted RBP11.33□□□□□ -0.6
TSPAN3-208ENST00000560514 A0A087WYN8 130 aa11.32□□□□□ -0.6
TSPAN3-208ENST00000560514 TMSB15BA0A087X1C1 80 aa11.32□□□□□ -0.6
TSPAN3-208ENST00000560514 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.32□□□□□ -0.6
TSPAN3-208ENST00000560514 KANTRA0A1W2PQU2 76 aa11.32□□□□□ -0.6
TSPAN3-208ENST00000560514 SMLR1H3BR10 107 aa11.32□□□□□ -0.6
TSPAN3-208ENST00000560514 PFDN1O60925 122 aa11.32□□□□□ -0.6
TSPAN3-208ENST00000560514 GAS8-AS1O95177 125 aa11.32□□□□□ -0.6
TSPAN3-208ENST00000560514 H2AFB1P0C5Y9 115 aa11.32□□□□□ -0.6
TSPAN3-208ENST00000560514 CIRBPQ14011 172 aaKnown RBP11.32□□□□□ -0.6
TSPAN3-208ENST00000560514 TMUB2Q71RG4 321 aa11.32□□□□□ -0.6
TSPAN3-208ENST00000560514 FAM213BQ8TBF2 198 aa11.32□□□□□ -0.6
TSPAN3-208ENST00000560514 ZNF471Q9BX82 626 aaPredicted RBP11.32□□□□□ -0.6
TSPAN3-208ENST00000560514 AP5S1Q9NUS5 200 aa11.32□□□□□ -0.6
TSPAN3-208ENST00000560514 hDV102S1A0JD36 115 aa11.31□□□□□ -0.6
TSPAN3-208ENST00000560514 PHOX2AO14813 284 aa11.31□□□□□ -0.6
TSPAN3-208ENST00000560514 BCL2L11O43521 198 aa11.31□□□□□ -0.6
TSPAN3-208ENST00000560514 CLPSL2Q6UWE3 100 aa11.31□□□□□ -0.6
TSPAN3-208ENST00000560514 SNAI2O43623 268 aa11.3□□□□□ -0.6
TSPAN3-208ENST00000560514 OR5AL1P0C617 328 aa11.3□□□□□ -0.6
TSPAN3-208ENST00000560514 TRAV1-1A0A0B4J248 108 aa11.29□□□□□ -0.6
TSPAN3-208ENST00000560514 CNBPP62633 177 aaKnown RBP11.29□□□□□ -0.6
TSPAN3-208ENST00000560514 ODF1Q14990 250 aa11.29□□□□□ -0.6
TSPAN3-208ENST00000560514 PRR27Q6MZM9 219 aa11.29□□□□□ -0.6
TSPAN3-208ENST00000560514 SCO2A0A1W2PP80 73 aa11.28□□□□□ -0.6
TSPAN3-208ENST00000560514 CHTF8P0CG12 524 aa11.28□□□□□ -0.6
TSPAN3-208ENST00000560514 RAB5CP51148 216 aa11.28□□□□□ -0.6
TSPAN3-208ENST00000560514 WDR73Q6P4I2 378 aa11.28□□□□□ -0.6
TSPAN3-208ENST00000560514 LINC00269Q8N2A0 174 aa11.28□□□□□ -0.6
TSPAN3-208ENST00000560514 KIF25-AS1Q9Y6Z4 181 aa11.28□□□□□ -0.6
TSPAN3-208ENST00000560514 TMEM97Q5BJF2 176 aa11.27□□□□□ -0.61
TSPAN3-208ENST00000560514 SPACA4Q8TDM5 124 aa11.27□□□□□ -0.61
TSPAN3-208ENST00000560514 GTSF1Q8WW33 167 aa11.27□□□□□ -0.61
TSPAN3-208ENST00000560514 MANBALQ9NQG1 85 aa11.27□□□□□ -0.61
TSPAN3-208ENST00000560514 PRR34Q9NV39 138 aa11.27□□□□□ -0.61
TSPAN3-208ENST00000560514 A0A0J9YXV3 536 aa11.26□□□□□ -0.61
TSPAN3-208ENST00000560514 ZNF56Q15929 161 aa11.26□□□□□ -0.61
TSPAN3-208ENST00000560514 SPANXN1Q5VSR9 72 aa11.26□□□□□ -0.61
TSPAN3-208ENST00000560514 EIF5AL1Q6IS14 154 aaKnown RBP11.26□□□□□ -0.61
TSPAN3-208ENST00000560514 OR10AG1Q8NH19 301 aa11.26□□□□□ -0.61
TSPAN3-208ENST00000560514 TEX46H3BTG2 121 aa11.25□□□□□ -0.61
TSPAN3-208ENST00000560514 RPL35P42766 123 aaKnown RBP11.25□□□□□ -0.61
TSPAN3-208ENST00000560514 RBX1P62877 108 aa11.25□□□□□ -0.61
TSPAN3-208ENST00000560514 REG3GQ6UW15 175 aa11.25□□□□□ -0.61
TSPAN3-208ENST00000560514 NEXN-AS1Q8NBZ9 246 aa11.25□□□□□ -0.61
TSPAN3-208ENST00000560514 C11orf52Q96A22 123 aa11.25□□□□□ -0.61
TSPAN3-208ENST00000560514 SMIM12Q96EX1 92 aa11.25□□□□□ -0.61
TSPAN3-208ENST00000560514 PLAC8Q9NZF1 115 aa11.25□□□□□ -0.61
TSPAN3-208ENST00000560514 IGLV10-54A0A075B6I4 117 aa11.24□□□□□ -0.61
TSPAN3-208ENST00000560514 A0A1B0GV50 99 aa11.24□□□□□ -0.61
TSPAN3-208ENST00000560514 GAGE6Q13070 117 aa11.24□□□□□ -0.61
TSPAN3-208ENST00000560514 KRTAP26-1Q6PEX3 210 aa11.24□□□□□ -0.61
TSPAN3-208ENST00000560514 RPS20P60866 119 aaKnown RBP11.23□□□□□ -0.61
TSPAN3-208ENST00000560514 VAX2Q9UIW0 290 aa11.23□□□□□ -0.61
TSPAN3-208ENST00000560514 TRBV25-1A0A075B6N4 114 aa11.22□□□□□ -0.61
TSPAN3-208ENST00000560514 F5H697 171 aa11.22□□□□□ -0.61
TSPAN3-208ENST00000560514 SMIM17P0DL12 118 aa11.22□□□□□ -0.61
TSPAN3-208ENST00000560514 CCL20P78556 96 aa11.22□□□□□ -0.61
TSPAN3-208ENST00000560514 PRR3P79522 188 aaKnown RBP11.22□□□□□ -0.61
TSPAN3-208ENST00000560514 REG3AQ06141 175 aa11.22□□□□□ -0.61
TSPAN3-208ENST00000560514 DERL1Q9BUN8 251 aa11.22□□□□□ -0.61
TSPAN3-208ENST00000560514 GNG13Q9P2W3 67 aa11.22□□□□□ -0.61
TSPAN3-208ENST00000560514 TRAV8-4A0A0B4J246 113 aa11.21□□□□□ -0.61
TSPAN3-208ENST00000560514 P01737 135 aa11.21□□□□□ -0.61
TSPAN3-208ENST00000560514 F2Z2F3 143 aa11.2□□□□□ -0.62
TSPAN3-208ENST00000560514 PDE6DO43924 150 aa11.2□□□□□ -0.62
TSPAN3-208ENST00000560514 KRTAP10-8P60410 259 aa11.2□□□□□ -0.62
TSPAN3-208ENST00000560514 MAJINQ3KP22 176 aa11.2□□□□□ -0.62
TSPAN3-208ENST00000560514 AP1S3Q96PC3 154 aa11.2□□□□□ -0.62
TSPAN3-208ENST00000560514 BIN3Q9NQY0 253 aa11.2□□□□□ -0.62
TSPAN3-208ENST00000560514 XKRY2A2RUG3 117 aa11.19□□□□□ -0.62
TSPAN3-208ENST00000560514 IGLC6P0CF74 106 aa11.19□□□□□ -0.62
TSPAN3-208ENST00000560514 GZMBP10144 247 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms