RNA–Protein interactions for RNA: ENST00000559774.6

LRRC28-215, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 624 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-215ENST00000559774 P0DMU3 169 aa6.04□□□□□ -1.44
LRRC28-215ENST00000559774 FAM231AP0DMU4 169 aa6.04□□□□□ -1.44
LRRC28-215ENST00000559774 FAM231CP0DMU5 169 aa6.04□□□□□ -1.44
LRRC28-215ENST00000559774 LINC00694P0DN24 101 aa6.04□□□□□ -1.44
LRRC28-215ENST00000559774 ELOBQ15370 118 aa6.04□□□□□ -1.44
LRRC28-215ENST00000559774 TMEM97Q5BJF2 176 aa6.04□□□□□ -1.44
LRRC28-215ENST00000559774 SUMO4Q6EEV6 95 aa6.04□□□□□ -1.44
LRRC28-215ENST00000559774 DAZ4Q86SG3 579 aaKnown RBP6.04□□□□□ -1.44
LRRC28-215ENST00000559774 RNF185Q96GF1 192 aa6.04□□□□□ -1.44
LRRC28-215ENST00000559774 DAZ3Q9NR90 486 aaKnown RBP6.04□□□□□ -1.44
LRRC28-215ENST00000559774 URGCP-MRPS24S4R325 110 aa6.04□□□□□ -1.44
LRRC28-215ENST00000559774 CSMD3Q7Z407 3707 aa6.03□□□□□ -1.44
LRRC28-215ENST00000559774 NUDT3O95989 172 aa6.03□□□□□ -1.44
LRRC28-215ENST00000559774 CCL18P55774 89 aa6.03□□□□□ -1.44
LRRC28-215ENST00000559774 LGALS9CQ6DKI2 356 aa6.03□□□□□ -1.44
LRRC28-215ENST00000559774 ATRAIDQ6UW56 229 aa6.03□□□□□ -1.44
LRRC28-215ENST00000559774 AMN1Q8IY45 258 aa6.03□□□□□ -1.44
LRRC28-215ENST00000559774 NEXN-AS1Q8NBZ9 246 aa6.03□□□□□ -1.44
LRRC28-215ENST00000559774 ATP6V0E2Q8NHE4 81 aa6.03□□□□□ -1.44
LRRC28-215ENST00000559774 YPEL4Q96NS1 127 aa6.03□□□□□ -1.44
LRRC28-215ENST00000559774 LAMTOR2Q9Y2Q5 125 aa6.03□□□□□ -1.44
LRRC28-215ENST00000559774 TNFRSF18Q9Y5U5 241 aa6.03□□□□□ -1.44
LRRC28-215ENST00000559774 CKS2P33552 79 aa6.02□□□□□ -1.45
LRRC28-215ENST00000559774 UBE2D3P61077 147 aa6.02□□□□□ -1.45
LRRC28-215ENST00000559774 UBE2D2P62837 147 aa6.02□□□□□ -1.45
LRRC28-215ENST00000559774 RPL32P62910 135 aaKnown RBP6.02□□□□□ -1.45
LRRC28-215ENST00000559774 MRPL51Q4U2R6 128 aaKnown RBP6.02□□□□□ -1.45
LRRC28-215ENST00000559774 TMEM136Q6ZRR5 245 aa6.02□□□□□ -1.45
LRRC28-215ENST00000559774 ZNRF2Q8NHG8 242 aa6.02□□□□□ -1.45
LRRC28-215ENST00000559774 C20orf78Q9BR46 151 aa6.02□□□□□ -1.45
LRRC28-215ENST00000559774 GTSF1LQ9H1H1 148 aa6.02□□□□□ -1.45
LRRC28-215ENST00000559774 LOC100131303A0A0U1RQF7 123 aa6.01□□□□□ -1.45
LRRC28-215ENST00000559774 GAGE12JA6NER3 117 aa6.01□□□□□ -1.45
LRRC28-215ENST00000559774 PRSS47A8MTI9 375 aa6.01□□□□□ -1.45
LRRC28-215ENST00000559774 GAGE1Q13065 139 aa6.01□□□□□ -1.45
LRRC28-215ENST00000559774 GAGE4Q13068 117 aa6.01□□□□□ -1.45
LRRC28-215ENST00000559774 GAGE5Q13069 117 aa6.01□□□□□ -1.45
LRRC28-215ENST00000559774 GAGE13Q4V321 117 aa6.01□□□□□ -1.45
LRRC28-215ENST00000559774 LYPD5Q6UWN5 251 aa6.01□□□□□ -1.45
LRRC28-215ENST00000559774 ORMDL3Q8N138 153 aa6.01□□□□□ -1.45
LRRC28-215ENST00000559774 UPK3BQ9BT76 320 aa6.01□□□□□ -1.45
LRRC28-215ENST00000559774 STARD9Q9P2P6 4700 aa6.01□□□□□ -1.45
LRRC28-215ENST00000559774 TGIF2-C20orf24A0A0A6YYL0 155 aa6□□□□□ -1.45
LRRC28-215ENST00000559774 TRAV26-2A0A0B4J265 109 aa6□□□□□ -1.45
LRRC28-215ENST00000559774 TRBV27A0A0K0K1C4 114 aa6□□□□□ -1.45
LRRC28-215ENST00000559774 K7EP13 123 aa6□□□□□ -1.45
LRRC28-215ENST00000559774 TCAPO15273 167 aa6□□□□□ -1.45
LRRC28-215ENST00000559774 ATP6V1G1O75348 118 aa6□□□□□ -1.45
LRRC28-215ENST00000559774 NCR2O95944 276 aa6□□□□□ -1.45
LRRC28-215ENST00000559774 APCSP02743 223 aa6□□□□□ -1.45
LRRC28-215ENST00000559774 ESRGQ1W209 222 aa6□□□□□ -1.45
LRRC28-215ENST00000559774 OR10J3Q5JRS4 329 aa6□□□□□ -1.45
LRRC28-215ENST00000559774 LELP1Q5T871 98 aa6□□□□□ -1.45
LRRC28-215ENST00000559774 NRACQ8N912 160 aa6□□□□□ -1.45
LRRC28-215ENST00000559774 ST20Q9HBF5 79 aa6□□□□□ -1.45
LRRC28-215ENST00000559774 Q9UF83 564 aa6□□□□□ -1.45
LRRC28-215ENST00000559774 MRPS16Q9Y3D3 137 aaKnown RBP6□□□□□ -1.45
LRRC28-215ENST00000559774 NACAE9PAV3 2078 aa6□□□□□ -1.45
LRRC28-215ENST00000559774 TENM2Q9NT68 2774 aa6□□□□□ -1.45
LRRC28-215ENST00000559774 PLECQ15149 4684 aaKnown RBP5.99□□□□□ -1.45
LRRC28-215ENST00000559774 SDHAF1A6NFY7 115 aa5.99□□□□□ -1.45
LRRC28-215ENST00000559774 D6R8Y8 96 aa5.99□□□□□ -1.45
LRRC28-215ENST00000559774 VCYO14598 125 aa5.99□□□□□ -1.45
LRRC28-215ENST00000559774 TNFRSF6BO95407 300 aa5.99□□□□□ -1.45
LRRC28-215ENST00000559774 POLR2KP53803 58 aaKnown RBP5.99□□□□□ -1.45
LRRC28-215ENST00000559774 PKIAP61925 76 aa5.99□□□□□ -1.45
LRRC28-215ENST00000559774 SUMO2P61956 95 aaKnown RBP5.99□□□□□ -1.45
LRRC28-215ENST00000559774 CBLN2Q8IUK8 224 aa5.99□□□□□ -1.45
LRRC28-215ENST00000559774 LINC00476Q8WZB0 136 aa5.99□□□□□ -1.45
LRRC28-215ENST00000559774 PRELID3AQ96N28 172 aa5.99□□□□□ -1.45
LRRC28-215ENST00000559774 TMEM70Q9BUB7 260 aa5.99□□□□□ -1.45
LRRC28-215ENST00000559774 LINC00588Q9Y4M8 146 aa5.99□□□□□ -1.45
LRRC28-215ENST00000559774 TRBV6-8A0A0A6YYG3 113 aa5.98□□□□□ -1.45
LRRC28-215ENST00000559774 TRAV8-6A0A0B4J262 113 aa5.98□□□□□ -1.45
LRRC28-215ENST00000559774 I3L3M4 83 aa5.98□□□□□ -1.45
LRRC28-215ENST00000559774 K7EMI3 77 aa5.98□□□□□ -1.45
LRRC28-215ENST00000559774 RPL39LQ96EH5 51 aaKnown RBP5.98□□□□□ -1.45
LRRC28-215ENST00000559774 MRPL18Q9H0U6 180 aaKnown RBP5.98□□□□□ -1.45
LRRC28-215ENST00000559774 TRAPPC1Q9Y5R8 145 aa5.98□□□□□ -1.45
LRRC28-215ENST00000559774 COLCA2A8K830 154 aa5.97□□□□□ -1.45
LRRC28-215ENST00000559774 H7C423 109 aa5.97□□□□□ -1.45
LRRC28-215ENST00000559774 RPS10P46783 165 aaKnown RBP5.97□□□□□ -1.45
LRRC28-215ENST00000559774 FABP9Q0Z7S8 132 aa5.97□□□□□ -1.45
LRRC28-215ENST00000559774 COTL1Q14019 142 aa5.97□□□□□ -1.45
LRRC28-215ENST00000559774 IQCJQ1A5X6 159 aa5.97□□□□□ -1.45
LRRC28-215ENST00000559774 UBE2DNLQ8IWF7 75 aa5.97□□□□□ -1.45
LRRC28-215ENST00000559774 KIR2DL4Q99706 377 aa5.97□□□□□ -1.45
LRRC28-215ENST00000559774 CHCHD7Q9BUK0 85 aa5.97□□□□□ -1.45
LRRC28-215ENST00000559774 TRBV25-1A0A075B6N4 114 aa5.96□□□□□ -1.46
LRRC28-215ENST00000559774 IGHV1-24A0A0C4DH33 117 aa5.96□□□□□ -1.46
LRRC28-215ENST00000559774 LCE6AA0A183 80 aa5.96□□□□□ -1.46
LRRC28-215ENST00000559774 SMKR1H3BMG3 65 aa5.96□□□□□ -1.46
LRRC28-215ENST00000559774 GAS8-AS1O95177 125 aa5.96□□□□□ -1.46
LRRC28-215ENST00000559774 NPYP01303 97 aa5.96□□□□□ -1.46
LRRC28-215ENST00000559774 BTF3P20290 206 aaKnown RBP5.96□□□□□ -1.46
LRRC28-215ENST00000559774 PMCHP20382 165 aa5.96□□□□□ -1.46
LRRC28-215ENST00000559774 ALKBH7Q9BT30 221 aaPredicted RBP5.96□□□□□ -1.46
LRRC28-215ENST00000559774 SMIM2Q9BVW6 85 aa5.96□□□□□ -1.46
LRRC28-215ENST00000559774 MAP1LC3AQ9H492 121 aa5.96□□□□□ -1.46
LRRC28-215ENST00000559774 Q9H8V8 135 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms