RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 OR10G8Q8NGN5 311 aa5.49□□□□□ -1.53
SNX1-207ENST00000559401 OCC1Q8TAD7 63 aa5.49□□□□□ -1.53
SNX1-207ENST00000559401 CHCHD5Q9BSY4 110 aa5.49□□□□□ -1.53
SNX1-207ENST00000559401 KLK12Q9UKR0 248 aa5.49□□□□□ -1.53
SNX1-207ENST00000559401 DNAH11Q96DT5 4516 aa5.49□□□□□ -1.53
SNX1-207ENST00000559401 TRBV6-8A0A0A6YYG3 113 aa5.48□□□□□ -1.53
SNX1-207ENST00000559401 GATCO43716 136 aaKnown RBP5.48□□□□□ -1.53
SNX1-207ENST00000559401 ELOBQ15370 118 aa5.48□□□□□ -1.53
SNX1-207ENST00000559401 TWIST1Q15672 202 aa5.48□□□□□ -1.53
SNX1-207ENST00000559401 SUMO4Q6EEV6 95 aa5.48□□□□□ -1.53
SNX1-207ENST00000559401 MAPKAPK5-AS1Q8N8E1 139 aa5.48□□□□□ -1.53
SNX1-207ENST00000559401 UBE2WQ96B02 151 aa5.48□□□□□ -1.53
SNX1-207ENST00000559401 RMI2Q96E14 147 aa5.48□□□□□ -1.53
SNX1-207ENST00000559401 SMIM7Q9BQ49 75 aa5.48□□□□□ -1.53
SNX1-207ENST00000559401 DPH3P1Q9H4G8 78 aa5.48□□□□□ -1.53
SNX1-207ENST00000559401 KIF25-AS1Q9Y6Z4 181 aa5.48□□□□□ -1.53
SNX1-207ENST00000559401 IGKV2D-24A0A075B6R9 120 aa5.47□□□□□ -1.53
SNX1-207ENST00000559401 IGLV5-52A0A0A0MRZ9 124 aa5.47□□□□□ -1.53
SNX1-207ENST00000559401 ZNF727A8MUV8 499 aa5.47□□□□□ -1.53
SNX1-207ENST00000559401 LECT2O14960 151 aa5.47□□□□□ -1.53
SNX1-207ENST00000559401 CRPP02741 224 aa5.47□□□□□ -1.53
SNX1-207ENST00000559401 NTF3P20783 257 aa5.47□□□□□ -1.53
SNX1-207ENST00000559401 CTRLP40313 264 aa5.47□□□□□ -1.53
SNX1-207ENST00000559401 TMEM97Q5BJF2 176 aa5.47□□□□□ -1.53
SNX1-207ENST00000559401 SMIM15Q7Z3B0 74 aa5.47□□□□□ -1.53
SNX1-207ENST00000559401 LYPD6BQ8NI32 183 aa5.47□□□□□ -1.53
SNX1-207ENST00000559401 BORCS7Q96B45 105 aa5.47□□□□□ -1.53
SNX1-207ENST00000559401 FAM210AQ96ND0 272 aa5.47□□□□□ -1.53
SNX1-207ENST00000559401 CHCHD7Q9BUK0 85 aa5.47□□□□□ -1.53
SNX1-207ENST00000559401 TRBV25-1A0A075B6N4 114 aa5.46□□□□□ -1.54
SNX1-207ENST00000559401 LRCOL1A6NCL2 159 aa5.46□□□□□ -1.54
SNX1-207ENST00000559401 M0QY20 66 aa5.46□□□□□ -1.54
SNX1-207ENST00000559401 ANGP03950 147 aaKnown RBP5.46□□□□□ -1.54
SNX1-207ENST00000559401 GCSHP23434 173 aa5.46□□□□□ -1.54
SNX1-207ENST00000559401 PKIAP61925 76 aa5.46□□□□□ -1.54
SNX1-207ENST00000559401 MPV17L2Q567V2 206 aa5.46□□□□□ -1.54
SNX1-207ENST00000559401 RASL11AQ6T310 242 aa5.46□□□□□ -1.54
SNX1-207ENST00000559401 Q8N814 137 aa5.46□□□□□ -1.54
SNX1-207ENST00000559401 C15orf54Q8N8G6 183 aa5.46□□□□□ -1.54
SNX1-207ENST00000559401 PGLYRP4Q96LB8 373 aa5.46□□□□□ -1.54
SNX1-207ENST00000559401 DNAJC30Q96LL9 226 aa5.46□□□□□ -1.54
SNX1-207ENST00000559401 COX11Q9Y6N1 276 aa5.46□□□□□ -1.54
SNX1-207ENST00000559401 PKHD1P08F94 4074 aa5.46□□□□□ -1.54
SNX1-207ENST00000559401 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.45□□□□□ -1.54
SNX1-207ENST00000559401 A8MWL6 223 aa5.45□□□□□ -1.54
SNX1-207ENST00000559401 SRP19P09132 144 aaKnown RBP5.45□□□□□ -1.54
SNX1-207ENST00000559401 GAGE6Q13070 117 aa5.45□□□□□ -1.54
SNX1-207ENST00000559401 WDR73Q6P4I2 378 aa5.45□□□□□ -1.54
SNX1-207ENST00000559401 CLPSL2Q6UWE3 100 aa5.45□□□□□ -1.54
SNX1-207ENST00000559401 FAM231DQ6ZW35 169 aa5.45□□□□□ -1.54
SNX1-207ENST00000559401 Q8N976 141 aa5.45□□□□□ -1.54
SNX1-207ENST00000559401 DEFB104AQ8WTQ1 72 aa5.45□□□□□ -1.54
SNX1-207ENST00000559401 NTN5Q8WTR8 489 aaPredicted RBP5.45□□□□□ -1.54
SNX1-207ENST00000559401 BAALCQ8WXS3 180 aa5.45□□□□□ -1.54
SNX1-207ENST00000559401 C1orf43Q9BWL3 253 aa5.45□□□□□ -1.54
SNX1-207ENST00000559401 DYNC1H1Q14204 4646 aaKnown RBP5.45□□□□□ -1.54
SNX1-207ENST00000559401 TRAV26-2A0A0B4J265 109 aa5.44□□□□□ -1.54
SNX1-207ENST00000559401 IGHV1-24A0A0C4DH33 117 aa5.44□□□□□ -1.54
SNX1-207ENST00000559401 KRTAP10-1P60331 282 aa5.44□□□□□ -1.54
SNX1-207ENST00000559401 Q0VG73 95 aa5.44□□□□□ -1.54
SNX1-207ENST00000559401 WFDC2Q14508 124 aa5.44□□□□□ -1.54
SNX1-207ENST00000559401 NTM-AS1Q6ZSK4 140 aa5.44□□□□□ -1.54
SNX1-207ENST00000559401 LINC01551Q86U37 167 aa5.44□□□□□ -1.54
SNX1-207ENST00000559401 GTSF1Q8WW33 167 aa5.44□□□□□ -1.54
SNX1-207ENST00000559401 NIT2Q9NQR4 276 aa5.44□□□□□ -1.54
SNX1-207ENST00000559401 RYR1P21817 5038 aa5.43□□□□□ -1.54
SNX1-207ENST00000559401 UBE2L6O14933 153 aa5.43□□□□□ -1.54
SNX1-207ENST00000559401 HLA-DQA1P01909 254 aa5.43□□□□□ -1.54
SNX1-207ENST00000559401 AMTP48728 403 aa5.43□□□□□ -1.54
SNX1-207ENST00000559401 COTL1Q14019 142 aa5.43□□□□□ -1.54
SNX1-207ENST00000559401 ADIRFQ15847 76 aa5.43□□□□□ -1.54
SNX1-207ENST00000559401 IQCJQ1A5X6 159 aa5.43□□□□□ -1.54
SNX1-207ENST00000559401 CT83Q5H943 113 aa5.43□□□□□ -1.54
SNX1-207ENST00000559401 ATRAIDQ6UW56 229 aa5.43□□□□□ -1.54
SNX1-207ENST00000559401 TEX261Q6UWH6 196 aa5.43□□□□□ -1.54
SNX1-207ENST00000559401 Q8N1X5 172 aa5.43□□□□□ -1.54
SNX1-207ENST00000559401 GATD1Q8NB37 220 aa5.43□□□□□ -1.54
SNX1-207ENST00000559401 TMEM243Q9BU79 118 aa5.43□□□□□ -1.54
SNX1-207ENST00000559401 CNFNQ9BYD5 112 aa5.43□□□□□ -1.54
SNX1-207ENST00000559401 NDUFS6O75380 124 aaKnown RBP5.42□□□□□ -1.54
SNX1-207ENST00000559401 FOXA3P55318 350 aaPredicted RBP5.42□□□□□ -1.54
SNX1-207ENST00000559401 RBX1P62877 108 aa5.42□□□□□ -1.54
SNX1-207ENST00000559401 HAMPP81172 84 aa5.42□□□□□ -1.54
SNX1-207ENST00000559401 PEA15Q15121 130 aa5.42□□□□□ -1.54
SNX1-207ENST00000559401 TMEM241Q24JQ0 296 aa5.42□□□□□ -1.54
SNX1-207ENST00000559401 ENHOQ6UWT2 76 aa5.42□□□□□ -1.54
SNX1-207ENST00000559401 LINC00269Q8N2A0 174 aa5.42□□□□□ -1.54
SNX1-207ENST00000559401 TSKUQ8WUA8 353 aa5.42□□□□□ -1.54
SNX1-207ENST00000559401 RPL39LQ96EH5 51 aaKnown RBP5.42□□□□□ -1.54
SNX1-207ENST00000559401 KRTAP17-1Q9BYP8 105 aa5.42□□□□□ -1.54
SNX1-207ENST00000559401 KRTAP4-5Q9BYR2 181 aa5.42□□□□□ -1.54
SNX1-207ENST00000559401 OSTCQ9NRP0 149 aa5.42□□□□□ -1.54
SNX1-207ENST00000559401 A0A1B0GUT8 65 aa5.41□□□□□ -1.54
SNX1-207ENST00000559401 HIGD1CA8MV81 97 aa5.41□□□□□ -1.54
SNX1-207ENST00000559401 MIAQ16674 131 aa5.41□□□□□ -1.54
SNX1-207ENST00000559401 FAM74A3Q4VXF1 159 aa5.41□□□□□ -1.54
SNX1-207ENST00000559401 NAT8Q9UHE5 227 aa5.41□□□□□ -1.54
SNX1-207ENST00000559401 IGLV10-54A0A075B6I4 117 aa5.4□□□□□ -1.54
SNX1-207ENST00000559401 EPM2AB3EWF7 344 aa5.4□□□□□ -1.54
SNX1-207ENST00000559401 C9JQL5 133 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms