RNA–Protein interactions for RNA: ENST00000559151.1

CASC4-208, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 883 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-208ENST00000559151 OTORQ9NRC9 128 aa3.69□□□□□ -1.82
CASC4-208ENST00000559151 CBLN4Q9NTU7 201 aa3.69□□□□□ -1.82
CASC4-208ENST00000559151 NBPF19A0A087WUL8 3843 aa3.69□□□□□ -1.82
CASC4-208ENST00000559151 EML5Q05BV3 1969 aa3.69□□□□□ -1.82
CASC4-208ENST00000559151 ASCC3Q8N3C0 2202 aaKnown RBP3.68□□□□□ -1.82
CASC4-208ENST00000559151 MYOFQ9NZM1 2061 aa3.68□□□□□ -1.82
CASC4-208ENST00000559151 TLCD2A6NGC4 264 aa3.68□□□□□ -1.82
CASC4-208ENST00000559151 MGST1P10620 155 aaKnown RBP3.68□□□□□ -1.82
CASC4-208ENST00000559151 HIST1H1DP16402 221 aaKnown RBP3.68□□□□□ -1.82
CASC4-208ENST00000559151 TPPP2P59282 170 aa3.68□□□□□ -1.82
CASC4-208ENST00000559151 MYL5Q02045 173 aa3.68□□□□□ -1.82
CASC4-208ENST00000559151 MSMO1Q15800 293 aa3.68□□□□□ -1.82
CASC4-208ENST00000559151 MEIG1Q5JSS6 88 aa3.68□□□□□ -1.82
CASC4-208ENST00000559151 LINC00311Q8N616 119 aa3.68□□□□□ -1.82
CASC4-208ENST00000559151 TEX37Q96LM6 180 aa3.68□□□□□ -1.82
CASC4-208ENST00000559151 TMEM191AQ9H0A3 160 aa3.68□□□□□ -1.82
CASC4-208ENST00000559151 RERGLQ9H628 205 aa3.68□□□□□ -1.82
CASC4-208ENST00000559151 PCNX1Q96RV3 2341 aa3.68□□□□□ -1.82
CASC4-208ENST00000559151 LRBAP50851 2863 aa3.68□□□□□ -1.82
CASC4-208ENST00000559151 HEATR5BQ9P2D3 2071 aa3.67□□□□□ -1.82
CASC4-208ENST00000559151 BSNQ9UPA5 3926 aa3.67□□□□□ -1.82
CASC4-208ENST00000559151 NF1P21359 2839 aa3.67□□□□□ -1.82
CASC4-208ENST00000559151 ITPR2Q14571 2701 aa3.67□□□□□ -1.82
CASC4-208ENST00000559151 IGKV3D-7A0A0C4DH55 119 aa3.67□□□□□ -1.82
CASC4-208ENST00000559151 IGKV3OR2-268A0A0C4DH90 116 aa3.67□□□□□ -1.82
CASC4-208ENST00000559151 C7orf71A4D174 169 aa3.67□□□□□ -1.82
CASC4-208ENST00000559151 MIFP14174 115 aa3.67□□□□□ -1.82
CASC4-208ENST00000559151 NFYBP25208 207 aa3.67□□□□□ -1.82
CASC4-208ENST00000559151 SDC2P34741 201 aa3.67□□□□□ -1.82
CASC4-208ENST00000559151 INSL3P51460 131 aa3.67□□□□□ -1.82
CASC4-208ENST00000559151 PYY3Q5JQD4 70 aa3.67□□□□□ -1.82
CASC4-208ENST00000559151 C1orf140Q5VVS0 124 aa3.67□□□□□ -1.82
CASC4-208ENST00000559151 C5orf17Q8NAS9 161 aa3.67□□□□□ -1.82
CASC4-208ENST00000559151 OR5D14Q8NGL3 314 aa3.67□□□□□ -1.82
CASC4-208ENST00000559151 OR2T10Q8NGZ9 312 aa3.67□□□□□ -1.82
CASC4-208ENST00000559151 LCN9Q8WX39 176 aa3.67□□□□□ -1.82
CASC4-208ENST00000559151 MAGOHBQ96A72 148 aaKnown RBP3.67□□□□□ -1.82
CASC4-208ENST00000559151 ZC2HC1AQ96GY0 325 aa3.67□□□□□ -1.82
CASC4-208ENST00000559151 TCEAL2Q9H3H9 227 aaPredicted RBP3.67□□□□□ -1.82
CASC4-208ENST00000559151 MED9Q9NWA0 146 aa3.67□□□□□ -1.82
CASC4-208ENST00000559151 ZFHX3Q15911 3703 aa3.67□□□□□ -1.82
CASC4-208ENST00000559151 PRRC2CQ9Y520 2896 aaKnown RBP3.67□□□□□ -1.82
CASC4-208ENST00000559151 TLN1Q9Y490 2541 aaKnown RBP3.66□□□□□ -1.82
CASC4-208ENST00000559151 LAMA4Q16363 1823 aa3.66□□□□□ -1.82
CASC4-208ENST00000559151 TRAV3A0A0B4J244 114 aa3.66□□□□□ -1.82
CASC4-208ENST00000559151 CCDC179H3BU77 68 aa3.66□□□□□ -1.82
CASC4-208ENST00000559151 RNASE3P12724 160 aaKnown RBP3.66□□□□□ -1.82
CASC4-208ENST00000559151 TMBIM6P55061 237 aa3.66□□□□□ -1.82
CASC4-208ENST00000559151 C6orf52Q5T4I8 152 aa3.66□□□□□ -1.82
CASC4-208ENST00000559151 BRK1Q8WUW1 75 aa3.66□□□□□ -1.82
CASC4-208ENST00000559151 PRO1933Q9H354 126 aa3.66□□□□□ -1.82
CASC4-208ENST00000559151 TAS2R8Q9NYW2 309 aa3.66□□□□□ -1.82
CASC4-208ENST00000559151 MED13LQ71F56 2210 aa3.66□□□□□ -1.82
CASC4-208ENST00000559151 NUP210Q8TEM1 1887 aaPredicted RBP3.65□□□□□ -1.82
CASC4-208ENST00000559151 CRYBG3Q68DQ2 2970 aa3.65□□□□□ -1.82
CASC4-208ENST00000559151 A0A0G2JMM0 328 aa3.65□□□□□ -1.83
CASC4-208ENST00000559151 FAM236AA0A1B0GUQ0 79 aa3.65□□□□□ -1.83
CASC4-208ENST00000559151 FAM236BA0A1B0GV22 79 aa3.65□□□□□ -1.83
CASC4-208ENST00000559151 A0A1W2PPB8 328 aa3.65□□□□□ -1.83
CASC4-208ENST00000559151 KIR3DP1A8MWS1 328 aa3.65□□□□□ -1.83
CASC4-208ENST00000559151 CDC42EP2O14613 210 aa3.65□□□□□ -1.83
CASC4-208ENST00000559151 CD14P08571 375 aa3.65□□□□□ -1.83
CASC4-208ENST00000559151 SSR2P43308 183 aa3.65□□□□□ -1.83
CASC4-208ENST00000559151 PLGLB1Q02325 96 aa3.65□□□□□ -1.83
CASC4-208ENST00000559151 STAG3L4Q8TBR4 150 aa3.65□□□□□ -1.83
CASC4-208ENST00000559151 SDF2Q99470 211 aa3.65□□□□□ -1.83
CASC4-208ENST00000559151 BANF2Q9H503 90 aa3.65□□□□□ -1.83
CASC4-208ENST00000559151 CCDC167Q9P0B6 97 aa3.65□□□□□ -1.83
CASC4-208ENST00000559151 RP1P56715 2156 aa3.65□□□□□ -1.83
CASC4-208ENST00000559151 SPG11Q96JI7 2443 aa3.64□□□□□ -1.83
CASC4-208ENST00000559151 TRBV7-6A0A0J9YX20 115 aa3.64□□□□□ -1.83
CASC4-208ENST00000559151 ODAMA1E959 279 aa3.64□□□□□ -1.83
CASC4-208ENST00000559151 C2orf70A6NJV1 201 aa3.64□□□□□ -1.83
CASC4-208ENST00000559151 TAX1BP3O14907 124 aa3.64□□□□□ -1.83
CASC4-208ENST00000559151 FABP2P12104 132 aa3.64□□□□□ -1.83
CASC4-208ENST00000559151 ZNF93P35789 620 aaPredicted RBP3.64□□□□□ -1.83
CASC4-208ENST00000559151 EIF5AP63241 154 aaKnown RBP3.64□□□□□ -1.83
CASC4-208ENST00000559151 RRN3P1Q2M238 152 aa3.64□□□□□ -1.83
CASC4-208ENST00000559151 LINC00305Q7Z4B0 112 aa3.64□□□□□ -1.83
CASC4-208ENST00000559151 IER3IP1Q9Y5U9 82 aa3.64□□□□□ -1.83
CASC4-208ENST00000559151 NAV3Q8IVL0 2385 aa3.64□□□□□ -1.83
CASC4-208ENST00000559151 CELSR1Q9NYQ6 3014 aa3.64□□□□□ -1.83
CASC4-208ENST00000559151 DSPPQ9NZW4 1301 aa3.64□□□□□ -1.83
CASC4-208ENST00000559151 AHCTF1Q8WYP5 2266 aa3.64□□□□□ -1.83
CASC4-208ENST00000559151 MYH9P35579 1960 aaKnown RBP3.63□□□□□ -1.83
CASC4-208ENST00000559151 SPTBN1Q01082 2364 aaKnown RBP3.63□□□□□ -1.83
CASC4-208ENST00000559151 USP9YO00507 2555 aaPredicted RBP3.63□□□□□ -1.83
CASC4-208ENST00000559151 KNTC1P50748 2209 aa3.63□□□□□ -1.83
CASC4-208ENST00000559151 KNL1Q8NG31 2342 aa3.63□□□□□ -1.83
CASC4-208ENST00000559151 BAALC-AS2P0C853 105 aa3.63□□□□□ -1.83
CASC4-208ENST00000559151 CRYGSP22914 178 aa3.63□□□□□ -1.83
CASC4-208ENST00000559151 PI4KAP42356 2102 aa3.63□□□□□ -1.83
CASC4-208ENST00000559151 FOXA3P55318 350 aaPredicted RBP3.63□□□□□ -1.83
CASC4-208ENST00000559151 CATR1Q13166 79 aa3.63□□□□□ -1.83
CASC4-208ENST00000559151 TEX29Q8N6K0 151 aa3.63□□□□□ -1.83
CASC4-208ENST00000559151 PLPP5Q8NEB5 264 aa3.63□□□□□ -1.83
CASC4-208ENST00000559151 CIB3Q96Q77 187 aaPredicted RBP3.63□□□□□ -1.83
CASC4-208ENST00000559151 SPANXDQ9BXN6 97 aa3.63□□□□□ -1.83
CASC4-208ENST00000559151 NHP2Q9NX24 153 aaKnown RBP3.63□□□□□ -1.83
CASC4-208ENST00000559151 TRAV27A0A087WT01 109 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms