RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 INSL4Q14641 139 aa0.56□□□□□ -2.32
CASC4-206ENST00000558847 SEC11CQ9BY50 192 aa0.56□□□□□ -2.32
CASC4-206ENST00000558847 PLXNA1Q9UIW2 1896 aa0.56□□□□□ -2.32
CASC4-206ENST00000558847 AKAP11Q9UKA4 1901 aa0.56□□□□□ -2.32
CASC4-206ENST00000558847 NAIPQ13075 1403 aa0.55□□□□□ -2.32
CASC4-206ENST00000558847 NRXN2Q9P2S2 1712 aa0.55□□□□□ -2.32
CASC4-206ENST00000558847 MYO7AQ13402 2215 aa0.55□□□□□ -2.32
CASC4-206ENST00000558847 K7EP13 123 aa0.55□□□□□ -2.32
CASC4-206ENST00000558847 AGPAT4-IT1Q9H0P7 198 aa0.55□□□□□ -2.32
CASC4-206ENST00000558847 RERGLQ9H628 205 aa0.55□□□□□ -2.32
CASC4-206ENST00000558847 TRGV1A0A0A0MS02 117 aa0.54□□□□□ -2.32
CASC4-206ENST00000558847 GCHFRP30047 84 aa0.54□□□□□ -2.32
CASC4-206ENST00000558847 COX6A2Q02221 97 aa0.54□□□□□ -2.32
CASC4-206ENST00000558847 S100A7L2Q5SY68 101 aa0.54□□□□□ -2.32
CASC4-206ENST00000558847 Q6ZRX8 168 aa0.54□□□□□ -2.32
CASC4-206ENST00000558847 WFDC6Q9BQY6 131 aa0.54□□□□□ -2.32
CASC4-206ENST00000558847 TNS1Q9HBL0 1735 aaKnown RBP0.54□□□□□ -2.32
CASC4-206ENST00000558847 CFTRP13569 1480 aa0.54□□□□□ -2.32
CASC4-206ENST00000558847 UNC13BO14795 1591 aa0.53□□□□□ -2.32
CASC4-206ENST00000558847 BICRAQ9NZM4 1560 aa0.53□□□□□ -2.32
CASC4-206ENST00000558847 F5P12259 2224 aa0.53□□□□□ -2.32
CASC4-206ENST00000558847 PHIPQ8WWQ0 1821 aa0.53□□□□□ -2.32
CASC4-206ENST00000558847 HIST1H1DP16402 221 aaKnown RBP0.53□□□□□ -2.32
CASC4-206ENST00000558847 Q5VV11 94 aa0.53□□□□□ -2.32
CASC4-206ENST00000558847 NAA60Q9H7X0 242 aa0.53□□□□□ -2.32
CASC4-206ENST00000558847 SERP1Q9Y6X1 66 aa0.53□□□□□ -2.32
CASC4-206ENST00000558847 TNCP24821 2201 aa0.52□□□□□ -2.33
CASC4-206ENST00000558847 CLPSL1A2RUU4 121 aa0.52□□□□□ -2.33
CASC4-206ENST00000558847 SIX6O95475 246 aa0.52□□□□□ -2.33
CASC4-206ENST00000558847 NMBP08949 121 aa0.52□□□□□ -2.33
CASC4-206ENST00000558847 BTG2P78543 158 aa0.52□□□□□ -2.33
CASC4-206ENST00000558847 LINC00312Q9Y6C7 94 aa0.52□□□□□ -2.33
CASC4-206ENST00000558847 LRRC37A3O60309 1634 aa0.52□□□□□ -2.33
CASC4-206ENST00000558847 GNG7O60262 68 aa0.51□□□□□ -2.33
CASC4-206ENST00000558847 SARNPP82979 210 aaKnown RBP0.51□□□□□ -2.33
CASC4-206ENST00000558847 BAGE3Q86Y29 109 aa0.51□□□□□ -2.33
CASC4-206ENST00000558847 AQP10Q96PS8 301 aa0.51□□□□□ -2.33
CASC4-206ENST00000558847 CADP27708 2225 aa0.5□□□□□ -2.33
CASC4-206ENST00000558847 MUC22E2RYF6 1773 aaPredicted RBP0.5□□□□□ -2.33
CASC4-206ENST00000558847 PIN1P1O15428 100 aa0.5□□□□□ -2.33
CASC4-206ENST00000558847 FGF7P21781 194 aa0.5□□□□□ -2.33
CASC4-206ENST00000558847 MEIG1Q5JSS6 88 aa0.5□□□□□ -2.33
CASC4-206ENST00000558847 Q6AWC8 147 aa0.5□□□□□ -2.33
CASC4-206ENST00000558847 CACNA1HO95180 2353 aa0.5□□□□□ -2.33
CASC4-206ENST00000558847 NAV2Q8IVL1 2488 aa0.49□□□□□ -2.33
CASC4-206ENST00000558847 PXDNQ92626 1479 aa0.49□□□□□ -2.33
CASC4-206ENST00000558847 TRAV13-2A0A0B4J235 113 aa0.49□□□□□ -2.33
CASC4-206ENST00000558847 SPAARA0A1B0GVQ0 90 aa0.49□□□□□ -2.33
CASC4-206ENST00000558847 EFCAB10A6NFE3 127 aa0.49□□□□□ -2.33
CASC4-206ENST00000558847 TTC28Q96AY4 2481 aa0.49□□□□□ -2.33
CASC4-206ENST00000558847 TPRP12270 2363 aaKnown RBP0.49□□□□□ -2.33
CASC4-206ENST00000558847 AHNAKQ09666 5890 aaKnown RBP0.49□□□□□ -2.33
CASC4-206ENST00000558847 MEGF8Q7Z7M0 2845 aa0.49□□□□□ -2.33
CASC4-206ENST00000558847 SSC5DA1L4H1 1573 aa0.49□□□□□ -2.33
CASC4-206ENST00000558847 PARP14Q460N5 1801 aa0.48□□□□□ -2.33
CASC4-206ENST00000558847 TRAV1-2A0A0B4J238 106 aa0.48□□□□□ -2.33
CASC4-206ENST00000558847 ZNF436-AS1Q8NC38 126 aaPredicted RBP0.48□□□□□ -2.33
CASC4-206ENST00000558847 R4GMQ9 66 aa0.48□□□□□ -2.33
CASC4-206ENST00000558847 FRAS1Q86XX4 4008 aa0.48□□□□□ -2.33
CASC4-206ENST00000558847 CASKIN1Q8WXD9 1431 aa0.47□□□□□ -2.33
CASC4-206ENST00000558847 HCG22E2RYF7 251 aa0.47□□□□□ -2.33
CASC4-206ENST00000558847 Q56UQ5 140 aa0.47□□□□□ -2.33
CASC4-206ENST00000558847 UBE2DNLQ8IWF7 75 aa0.47□□□□□ -2.33
CASC4-206ENST00000558847 PPP3R2Q96LZ3 170 aa0.47□□□□□ -2.33
CASC4-206ENST00000558847 MUC5BQ9HC84 5762 aaPredicted RBP0.47□□□□□ -2.33
CASC4-206ENST00000558847 ABCA12Q86UK0 2595 aa0.47□□□□□ -2.33
CASC4-206ENST00000558847 Q5BKY6 102 aa0.46□□□□□ -2.34
CASC4-206ENST00000558847 Q8N8P6 123 aa0.46□□□□□ -2.34
CASC4-206ENST00000558847 PHGR1C9JFL3 82 aa0.45□□□□□ -2.34
CASC4-206ENST00000558847 SPINK1P00995 79 aa0.45□□□□□ -2.34
CASC4-206ENST00000558847 RBM3P98179 157 aaKnown RBP0.45□□□□□ -2.34
CASC4-206ENST00000558847 DOCK11Q5JSL3 2073 aa0.44□□□□□ -2.34
CASC4-206ENST00000558847 PPP1R17O96001 155 aa0.44□□□□□ -2.34
CASC4-206ENST00000558847 APOC2P02655 101 aa0.44□□□□□ -2.34
CASC4-206ENST00000558847 C10orf128Q5T292 105 aa0.44□□□□□ -2.34
CASC4-206ENST00000558847 RPL13AP3Q6NVV1 102 aa0.44□□□□□ -2.34
CASC4-206ENST00000558847 FAM213BQ8TBF2 198 aa0.44□□□□□ -2.34
CASC4-206ENST00000558847 LSM10Q969L4 123 aaKnown RBP0.44□□□□□ -2.34
CASC4-206ENST00000558847 LENEPQ9Y5L5 61 aa0.44□□□□□ -2.34
CASC4-206ENST00000558847 PIEZO1Q92508 2521 aa0.43□□□□□ -2.34
CASC4-206ENST00000558847 SPEF2Q9C093 1822 aa0.43□□□□□ -2.34
CASC4-206ENST00000558847 CCL18P55774 89 aa0.43□□□□□ -2.34
CASC4-206ENST00000558847 ZMYM4Q5VZL5 1548 aa0.43□□□□□ -2.34
CASC4-206ENST00000558847 SIPA1L3O60292 1781 aaPredicted RBP0.42□□□□□ -2.34
CASC4-206ENST00000558847 GOLGA3Q08378 1498 aa0.42□□□□□ -2.34
CASC4-206ENST00000558847 NWD2Q9ULI1 1742 aa0.42□□□□□ -2.34
CASC4-206ENST00000558847 A0A0D9SFI3 127 aa0.42□□□□□ -2.34
CASC4-206ENST00000558847 IFNGP01579 166 aa0.42□□□□□ -2.34
CASC4-206ENST00000558847 SPINK8P0C7L1 97 aa0.42□□□□□ -2.34
CASC4-206ENST00000558847 AKAIN1P0CW23 69 aa0.42□□□□□ -2.34
CASC4-206ENST00000558847 C8orf59Q8N0T1 100 aaPredicted RBP0.42□□□□□ -2.34
CASC4-206ENST00000558847 TTC9CQ8N5M4 171 aa0.42□□□□□ -2.34
CASC4-206ENST00000558847 SMIM4Q8WVI0 70 aa0.42□□□□□ -2.34
CASC4-206ENST00000558847 CYP4F30PQ9H0H9 118 aa0.42□□□□□ -2.34
CASC4-206ENST00000558847 GPR98Q8WXG9 6306 aa0.41□□□□□ -2.34
CASC4-206ENST00000558847 PPIP5K1Q6PFW1 1433 aa0.41□□□□□ -2.34
CASC4-206ENST00000558847 G3V318 75 aa0.41□□□□□ -2.34
CASC4-206ENST00000558847 CFAP126Q5VTH2 177 aa0.41□□□□□ -2.34
CASC4-206ENST00000558847 BCL9LQ86UU0 1499 aa0.41□□□□□ -2.34
CASC4-206ENST00000558847 PTPRZ1P23471 2315 aaPredicted RBP0.41□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms