RNA–Protein interactions for RNA: ENST00000558787.1

MARK3-215, Transcript of microtubule affinity regulating kinase 3, human

TSL 2

Gene MARK3, Length 758 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARK3-215	ENST00000558787	RPS20	P60866	119 aa	Known RBP	4.75	□□□□□ -1.65
MARK3-215	ENST00000558787	ZNF415	Q09FC8	603 aa		4.75	□□□□□ -1.65
MARK3-215	ENST00000558787	TDRG1	Q3Y452	100 aa		4.75	□□□□□ -1.65
MARK3-215	ENST00000558787	FAM159A	Q6UWV7	190 aa		4.75	□□□□□ -1.65
MARK3-215	ENST00000558787	WFDC10B	Q8IUB3	73 aa		4.75	□□□□□ -1.65
MARK3-215	ENST00000558787	OR10G8	Q8NGN5	311 aa		4.75	□□□□□ -1.65
MARK3-215	ENST00000558787	KCNS1	Q96KK3	526 aa		4.75	□□□□□ -1.65
MARK3-215	ENST00000558787	RPP21	Q9H633	154 aa	Known RBP	4.75	□□□□□ -1.65
MARK3-215	ENST00000558787		A0A087WWC5	75 aa		4.74	□□□□□ -1.65
MARK3-215	ENST00000558787	IGHV3-16	A0A0C4DH30	117 aa		4.74	□□□□□ -1.65
MARK3-215	ENST00000558787		K7EQD1	137 aa		4.74	□□□□□ -1.65
MARK3-215	ENST00000558787	ORM1	P02763	201 aa		4.74	□□□□□ -1.65
MARK3-215	ENST00000558787	CXCL1	P09341	107 aa		4.74	□□□□□ -1.65
MARK3-215	ENST00000558787	DNAH10OS	P0CZ25	163 aa		4.74	□□□□□ -1.65
MARK3-215	ENST00000558787	BTF3	P20290	206 aa	Known RBP	4.74	□□□□□ -1.65
MARK3-215	ENST00000558787	MRPL23	Q16540	153 aa	Known RBP	4.74	□□□□□ -1.65
MARK3-215	ENST00000558787	NEGR1	Q7Z3B1	354 aa		4.74	□□□□□ -1.65
MARK3-215	ENST00000558787	OR2D3	Q8NGH3	330 aa		4.74	□□□□□ -1.65
MARK3-215	ENST00000558787	CTDSP1	Q9GZU7	261 aa		4.74	□□□□□ -1.65
MARK3-215	ENST00000558787	RNASE7	Q9H1E1	156 aa	Known RBP	4.74	□□□□□ -1.65
MARK3-215	ENST00000558787	TMEM242	Q9NWH2	141 aa		4.74	□□□□□ -1.65
MARK3-215	ENST00000558787	TRGV11	A0A075B6L2	103 aa		4.73	□□□□□ -1.65
MARK3-215	ENST00000558787	FAM231B	A6NCW3	169 aa		4.73	□□□□□ -1.65
MARK3-215	ENST00000558787		A8MWL6	223 aa		4.73	□□□□□ -1.65
MARK3-215	ENST00000558787	SRI	P30626	198 aa		4.73	□□□□□ -1.65
MARK3-215	ENST00000558787	ASIP	P42127	132 aa		4.73	□□□□□ -1.65
MARK3-215	ENST00000558787	SLA	Q13239	276 aa		4.73	□□□□□ -1.65
MARK3-215	ENST00000558787	OR4C5	Q8NGB2	326 aa		4.73	□□□□□ -1.65
MARK3-215	ENST00000558787	RASL10A	Q92737	203 aa		4.73	□□□□□ -1.65
MARK3-215	ENST00000558787	IMMP2L	Q96T52	175 aa		4.73	□□□□□ -1.65
MARK3-215	ENST00000558787	GFRA4	Q9GZZ7	299 aa		4.73	□□□□□ -1.65
MARK3-215	ENST00000558787	RPS10P5	Q9NQ39	176 aa		4.73	□□□□□ -1.65
MARK3-215	ENST00000558787	FAT1	Q14517	4588 aa		4.73	□□□□□ -1.65
MARK3-215	ENST00000558787	IGKV3D-20	A0A0C4DH25	116 aa		4.72	□□□□□ -1.65
MARK3-215	ENST00000558787	C7orf77	A4D0Y5	90 aa		4.72	□□□□□ -1.65
MARK3-215	ENST00000558787		M0R2P5	195 aa		4.72	□□□□□ -1.65
MARK3-215	ENST00000558787	TYMS	P04818	313 aa		4.72	□□□□□ -1.65
MARK3-215	ENST00000558787	S100P	P25815	95 aa		4.72	□□□□□ -1.65
MARK3-215	ENST00000558787	S100A4	P26447	101 aa	Known RBP	4.72	□□□□□ -1.65
MARK3-215	ENST00000558787	KRTAP10-1	P60331	282 aa		4.72	□□□□□ -1.65
MARK3-215	ENST00000558787	DNLZ	Q5SXM8	178 aa		4.72	□□□□□ -1.65
MARK3-215	ENST00000558787	KCNIP4	Q6PIL6	250 aa		4.72	□□□□□ -1.65
MARK3-215	ENST00000558787	TSKU	Q8WUA8	353 aa		4.72	□□□□□ -1.65
MARK3-215	ENST00000558787	SPX	Q9BT56	116 aa		4.72	□□□□□ -1.65
MARK3-215	ENST00000558787	IL36B	Q9NZH7	164 aa		4.72	□□□□□ -1.65
MARK3-215	ENST00000558787		V9GYV3	84 aa		4.72	□□□□□ -1.65
MARK3-215	ENST00000558787	VPS13B	Q7Z7G8	4022 aa		4.71	□□□□□ -1.65
MARK3-215	ENST00000558787	TRAV9-2	A0A087WT02	112 aa		4.71	□□□□□ -1.66
MARK3-215	ENST00000558787		A0A087WTM6	91 aa		4.71	□□□□□ -1.66
MARK3-215	ENST00000558787	TMSB15B	A0A087X1C1	80 aa		4.71	□□□□□ -1.66
MARK3-215	ENST00000558787	IGHV3-73	A0A0B4J1V6	119 aa		4.71	□□□□□ -1.66
MARK3-215	ENST00000558787	TRAV4	A0A0B4J268	109 aa		4.71	□□□□□ -1.66
MARK3-215	ENST00000558787		F2Z2F3	143 aa		4.71	□□□□□ -1.66
MARK3-215	ENST00000558787	OR5AL1	P0C617	328 aa		4.71	□□□□□ -1.66
MARK3-215	ENST00000558787	XG	P55808	180 aa		4.71	□□□□□ -1.66
MARK3-215	ENST00000558787	HAMP	P81172	84 aa		4.71	□□□□□ -1.66
MARK3-215	ENST00000558787	RPL19	P84098	196 aa	Known RBP	4.71	□□□□□ -1.66
MARK3-215	ENST00000558787	FER1L6-AS1	Q8NA97	138 aa		4.71	□□□□□ -1.66
MARK3-215	ENST00000558787	BORCS7	Q96B45	105 aa		4.71	□□□□□ -1.66
MARK3-215	ENST00000558787	BTF3L4	Q96K17	158 aa		4.71	□□□□□ -1.66
MARK3-215	ENST00000558787	MSRB1	Q9NZV6	116 aa		4.71	□□□□□ -1.66
MARK3-215	ENST00000558787	NAT8B	Q9UHF3	227 aa		4.71	□□□□□ -1.66
MARK3-215	ENST00000558787	SRRM2	Q9UQ35	2752 aa	Known RBP	4.71	□□□□□ -1.66
MARK3-215	ENST00000558787	TRAV9-1	A0A075B6T8	112 aa		4.7	□□□□□ -1.66
MARK3-215	ENST00000558787	SMIM27	A0A1W2PRY6	76 aa		4.7	□□□□□ -1.66
MARK3-215	ENST00000558787	HIGD1C	A8MV81	97 aa		4.7	□□□□□ -1.66
MARK3-215	ENST00000558787	SNAI2	O43623	268 aa		4.7	□□□□□ -1.66
MARK3-215	ENST00000558787	CRYGD	P07320	174 aa		4.7	□□□□□ -1.66
MARK3-215	ENST00000558787	IGLC6	P0CF74	106 aa		4.7	□□□□□ -1.66
MARK3-215	ENST00000558787	EVI2A	P22794	236 aa		4.7	□□□□□ -1.66
MARK3-215	ENST00000558787	CTRL	P40313	264 aa		4.7	□□□□□ -1.66
MARK3-215	ENST00000558787	FOXA3	P55318	350 aa	Predicted RBP	4.7	□□□□□ -1.66
MARK3-215	ENST00000558787	CACNG7	P62955	275 aa		4.7	□□□□□ -1.66
MARK3-215	ENST00000558787	PIK3CD-AS1	Q5SR53	167 aa		4.7	□□□□□ -1.66
MARK3-215	ENST00000558787	WDR73	Q6P4I2	378 aa		4.7	□□□□□ -1.66
MARK3-215	ENST00000558787	NFE4	Q86UQ8	179 aa		4.7	□□□□□ -1.66
MARK3-215	ENST00000558787	SMCO4	Q9NRQ5	59 aa		4.7	□□□□□ -1.66
MARK3-215	ENST00000558787	HERC1	Q15751	4861 aa		4.7	□□□□□ -1.66
MARK3-215	ENST00000558787		A0A1B0GW15	77 aa		4.69	□□□□□ -1.66
MARK3-215	ENST00000558787	GRIFIN	A4D1Z8	144 aa		4.69	□□□□□ -1.66
MARK3-215	ENST00000558787	EPM2A	B3EWF7	344 aa		4.69	□□□□□ -1.66
MARK3-215	ENST00000558787		H3BVH4	76 aa		4.69	□□□□□ -1.66
MARK3-215	ENST00000558787	SMR3B	P02814	79 aa	Predicted RBP	4.69	□□□□□ -1.66
MARK3-215	ENST00000558787	ARMS2	P0C7Q2	107 aa		4.69	□□□□□ -1.66
MARK3-215	ENST00000558787	GZMB	P10144	247 aa		4.69	□□□□□ -1.66
MARK3-215	ENST00000558787	RNASE3	P12724	160 aa	Known RBP	4.69	□□□□□ -1.66
MARK3-215	ENST00000558787	GATA1	P15976	413 aa	Predicted RBP	4.69	□□□□□ -1.66
MARK3-215	ENST00000558787	ZNF876P	Q49A33	203 aa		4.69	□□□□□ -1.66
MARK3-215	ENST00000558787	CFAP126	Q5VTH2	177 aa		4.69	□□□□□ -1.66
MARK3-215	ENST00000558787	ATRAID	Q6UW56	229 aa		4.69	□□□□□ -1.66
MARK3-215	ENST00000558787	LYZL1	Q6UWQ5	148 aa		4.69	□□□□□ -1.66
MARK3-215	ENST00000558787	ATP5L2	Q7Z4Y8	100 aa		4.69	□□□□□ -1.66
MARK3-215	ENST00000558787	SLC25A29	Q8N8R3	303 aa		4.69	□□□□□ -1.66
MARK3-215	ENST00000558787	NUP35	Q8NFH5	326 aa		4.69	□□□□□ -1.66
MARK3-215	ENST00000558787	GTSF1	Q8WW33	167 aa		4.69	□□□□□ -1.66
MARK3-215	ENST00000558787	PTH2	Q96A98	100 aa		4.69	□□□□□ -1.66
MARK3-215	ENST00000558787	C9orf85	Q96MD7	179 aa		4.69	□□□□□ -1.66
MARK3-215	ENST00000558787	TPPP3	Q9BW30	176 aa		4.69	□□□□□ -1.66
MARK3-215	ENST00000558787	CNFN	Q9BYD5	112 aa		4.69	□□□□□ -1.66
MARK3-215	ENST00000558787	PHLDA3	Q9Y5J5	127 aa		4.69	□□□□□ -1.66

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