RNA–Protein interactions for RNA: ENST00000558771.1

LRRC28-208, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-208ENST00000558771 hDV102S1A0JD36 115 aa3.38□□□□□ -1.87
LRRC28-208ENST00000558771 C17orf112F2Z3M2 114 aa3.38□□□□□ -1.87
LRRC28-208ENST00000558771 H3BMQ9 156 aa3.38□□□□□ -1.87
LRRC28-208ENST00000558771 RPL36AP83881 106 aaKnown RBP3.38□□□□□ -1.87
LRRC28-208ENST00000558771 SMUG1Q53HV7 270 aa3.38□□□□□ -1.87
LRRC28-208ENST00000558771 SPINK6Q6UWN8 80 aa3.38□□□□□ -1.87
LRRC28-208ENST00000558771 NEXN-AS1Q8NBZ9 246 aa3.38□□□□□ -1.87
LRRC28-208ENST00000558771 SEC22CQ9BRL7 303 aa3.38□□□□□ -1.87
LRRC28-208ENST00000558771 KCNIP2Q9NS61 270 aa3.38□□□□□ -1.87
LRRC28-208ENST00000558771 PSG8Q9UQ74 426 aa3.38□□□□□ -1.87
LRRC28-208ENST00000558771 TRBV7-3A0A075B6L6 115 aa3.37□□□□□ -1.87
LRRC28-208ENST00000558771 MUC21A0A0G2JKD1 596 aa3.37□□□□□ -1.87
LRRC28-208ENST00000558771 TRBV10-1A0A0K0K1A3 114 aa3.37□□□□□ -1.87
LRRC28-208ENST00000558771 SERTM2A0A1B0GWG4 89 aa3.37□□□□□ -1.87
LRRC28-208ENST00000558771 IFITM10A6NMD0 228 aa3.37□□□□□ -1.87
LRRC28-208ENST00000558771 H3BVH4 76 aa3.37□□□□□ -1.87
LRRC28-208ENST00000558771 PTTG1O95997 202 aa3.37□□□□□ -1.87
LRRC28-208ENST00000558771 TCRBP04435 133 aa3.37□□□□□ -1.87
LRRC28-208ENST00000558771 S100A5P33763 92 aa3.37□□□□□ -1.87
LRRC28-208ENST00000558771 MAJINQ3KP22 176 aa3.37□□□□□ -1.87
LRRC28-208ENST00000558771 ZFP69Q49AA0 526 aa3.37□□□□□ -1.87
LRRC28-208ENST00000558771 TRIQKQ629K1 86 aa3.37□□□□□ -1.87
LRRC28-208ENST00000558771 LINC00269Q8N2A0 174 aa3.37□□□□□ -1.87
LRRC28-208ENST00000558771 LYPD6BQ8NI32 183 aa3.37□□□□□ -1.87
LRRC28-208ENST00000558771 CHCHD5Q9BSY4 110 aa3.37□□□□□ -1.87
LRRC28-208ENST00000558771 PRR34Q9NV39 138 aa3.37□□□□□ -1.87
LRRC28-208ENST00000558771 IL36BQ9NZH7 164 aa3.37□□□□□ -1.87
LRRC28-208ENST00000558771 IGLV10-54A0A075B6I4 117 aa3.36□□□□□ -1.87
LRRC28-208ENST00000558771 TRAV6A0A075B6T7 132 aa3.36□□□□□ -1.87
LRRC28-208ENST00000558771 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.36□□□□□ -1.87
LRRC28-208ENST00000558771 A0A0U1RQV1 116 aa3.36□□□□□ -1.87
LRRC28-208ENST00000558771 A0A1B0GUV1 79 aa3.36□□□□□ -1.87
LRRC28-208ENST00000558771 CENPXA8MT69 81 aa3.36□□□□□ -1.87
LRRC28-208ENST00000558771 NOL3O60936 208 aaKnown RBP3.36□□□□□ -1.87
LRRC28-208ENST00000558771 TCRAP04437 139 aa3.36□□□□□ -1.87
LRRC28-208ENST00000558771 ARMS2P0C7Q2 107 aa3.36□□□□□ -1.87
LRRC28-208ENST00000558771 KRTAP10-7P60409 375 aaPredicted RBP3.36□□□□□ -1.87
LRRC28-208ENST00000558771 PKIAP61925 76 aa3.36□□□□□ -1.87
LRRC28-208ENST00000558771 RBX1P62877 108 aa3.36□□□□□ -1.87
LRRC28-208ENST00000558771 FLI1Q01543 452 aaPredicted RBP3.36□□□□□ -1.87
LRRC28-208ENST00000558771 COX6A2Q02221 97 aa3.36□□□□□ -1.87
LRRC28-208ENST00000558771 SRSF9Q13242 221 aaKnown RBP eCLIP3.36□□□□□ -1.87
LRRC28-208ENST00000558771 CNPY1Q3B7I2 92 aa3.36□□□□□ -1.87
LRRC28-208ENST00000558771 PQLC2Q6ZP29 291 aa3.36□□□□□ -1.87
LRRC28-208ENST00000558771 PRNTQ86SH4 94 aa3.36□□□□□ -1.87
LRRC28-208ENST00000558771 STPG4Q8N801 248 aa3.36□□□□□ -1.87
LRRC28-208ENST00000558771 C5orf17Q8NAS9 161 aa3.36□□□□□ -1.87
LRRC28-208ENST00000558771 OR11H4Q8NGC9 324 aa3.36□□□□□ -1.87
LRRC28-208ENST00000558771 OR10G8Q8NGN5 311 aa3.36□□□□□ -1.87
LRRC28-208ENST00000558771 SFRP2Q96HF1 295 aa3.36□□□□□ -1.87
LRRC28-208ENST00000558771 SDHCQ99643 169 aaPredicted RBP3.36□□□□□ -1.87
LRRC28-208ENST00000558771 IGKV2-24A0A0C4DH68 120 aa3.35□□□□□ -1.87
LRRC28-208ENST00000558771 GRIFINA4D1Z8 144 aa3.35□□□□□ -1.87
LRRC28-208ENST00000558771 B4DEV8 164 aa3.35□□□□□ -1.87
LRRC28-208ENST00000558771 H7C1H1 209 aa3.35□□□□□ -1.87
LRRC28-208ENST00000558771 K7EQM0 130 aa3.35□□□□□ -1.87
LRRC28-208ENST00000558771 M0R381 172 aa3.35□□□□□ -1.87
LRRC28-208ENST00000558771 HMGB3O15347 200 aaKnown RBP3.35□□□□□ -1.87
LRRC28-208ENST00000558771 NDUFS6O75380 124 aaKnown RBP3.35□□□□□ -1.87
LRRC28-208ENST00000558771 REG3AQ06141 175 aa3.35□□□□□ -1.87
LRRC28-208ENST00000558771 GAGE6Q13070 117 aa3.35□□□□□ -1.87
LRRC28-208ENST00000558771 DNLZQ5SXM8 178 aa3.35□□□□□ -1.87
LRRC28-208ENST00000558771 NTM-AS1Q6ZSK4 140 aa3.35□□□□□ -1.87
LRRC28-208ENST00000558771 VAX2Q9UIW0 290 aa3.35□□□□□ -1.87
LRRC28-208ENST00000558771 TRAV34A0A0B4J273 112 aa3.34□□□□□ -1.87
LRRC28-208ENST00000558771 A0A1W2PPV4 95 aa3.34□□□□□ -1.87
LRRC28-208ENST00000558771 FABP5P3A8MUU1 101 aa3.34□□□□□ -1.87
LRRC28-208ENST00000558771 KRBOX1C9JBD0 128 aa3.34□□□□□ -1.87
LRRC28-208ENST00000558771 M0R036 132 aa3.34□□□□□ -1.87
LRRC28-208ENST00000558771 PLA2G10O15496 165 aa3.34□□□□□ -1.87
LRRC28-208ENST00000558771 ARL14EPLP0DKL9 152 aa3.34□□□□□ -1.87
LRRC28-208ENST00000558771 RAB5CP51148 216 aa3.34□□□□□ -1.87
LRRC28-208ENST00000558771 RAB2AP61019 212 aa3.34□□□□□ -1.87
LRRC28-208ENST00000558771 LRRC37A5PQ49AS3 106 aa3.34□□□□□ -1.87
LRRC28-208ENST00000558771 SAPCD1Q5SSQ6 148 aa3.34□□□□□ -1.87
LRRC28-208ENST00000558771 Q6ZRP5 223 aa3.34□□□□□ -1.87
LRRC28-208ENST00000558771 C20orf203Q8NBC4 194 aa3.34□□□□□ -1.87
LRRC28-208ENST00000558771 BATF3Q9NR55 127 aa3.34□□□□□ -1.87
LRRC28-208ENST00000558771 EPDR1Q9UM22 224 aa3.34□□□□□ -1.87
LRRC28-208ENST00000558771 PHLDA3Q9Y5J5 127 aa3.34□□□□□ -1.87
LRRC28-208ENST00000558771 TRBV25-1A0A075B6N4 114 aa3.33□□□□□ -1.88
LRRC28-208ENST00000558771 A0A096LNI7 61 aa3.33□□□□□ -1.88
LRRC28-208ENST00000558771 TRAV8-4A0A0B4J246 113 aa3.33□□□□□ -1.88
LRRC28-208ENST00000558771 TRBV6-1A0A0K0K1D8 114 aa3.33□□□□□ -1.88
LRRC28-208ENST00000558771 FAM231BA6NCW3 169 aa3.33□□□□□ -1.88
LRRC28-208ENST00000558771 LYRM1O43325 122 aa3.33□□□□□ -1.88
LRRC28-208ENST00000558771 SIX6O95475 246 aa3.33□□□□□ -1.88
LRRC28-208ENST00000558771 P01737 135 aa3.33□□□□□ -1.88
LRRC28-208ENST00000558771 STAG3L2P0CL84 134 aa3.33□□□□□ -1.88
LRRC28-208ENST00000558771 STAG3L3P0CL85 134 aa3.33□□□□□ -1.88
LRRC28-208ENST00000558771 GZMBP10144 247 aa3.33□□□□□ -1.88
LRRC28-208ENST00000558771 IL7P13232 177 aa3.33□□□□□ -1.88
LRRC28-208ENST00000558771 TPT1P13693 172 aaKnown RBP3.33□□□□□ -1.88
LRRC28-208ENST00000558771 RPS10P46783 165 aaKnown RBP3.33□□□□□ -1.88
LRRC28-208ENST00000558771 CRIP1P50238 77 aa3.33□□□□□ -1.88
LRRC28-208ENST00000558771 RAB4BP61018 213 aa3.33□□□□□ -1.88
LRRC28-208ENST00000558771 ZNF56Q15929 161 aa3.33□□□□□ -1.88
LRRC28-208ENST00000558771 TMEM97Q5BJF2 176 aa3.33□□□□□ -1.88
LRRC28-208ENST00000558771 PRR27Q6MZM9 219 aa3.33□□□□□ -1.88
LRRC28-208ENST00000558771 ZFP82Q8N141 532 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms