RNA–Protein interactions for RNA: ENST00000558298.5

RTF1-205, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 5

Gene RTF1, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-205ENST00000558298 MDFICQ9P1T7 246 aa6.08□□□□□ -1.44
RTF1-205ENST00000558298 IGHV4-4A0A075B6R2 117 aa6.07□□□□□ -1.44
RTF1-205ENST00000558298 IGKV2D-26A0A0A0MRZ7 120 aa6.07□□□□□ -1.44
RTF1-205ENST00000558298 A0A1B0GX51 115 aa6.07□□□□□ -1.44
RTF1-205ENST00000558298 H3BT86 120 aa6.07□□□□□ -1.44
RTF1-205ENST00000558298 M0R381 172 aa6.07□□□□□ -1.44
RTF1-205ENST00000558298 SLC25A20O43772 301 aa6.07□□□□□ -1.44
RTF1-205ENST00000558298 ORM1P02763 201 aa6.07□□□□□ -1.44
RTF1-205ENST00000558298 LYZP61626 148 aa6.07□□□□□ -1.44
RTF1-205ENST00000558298 TMEM78Q5T7P6 136 aa6.07□□□□□ -1.44
RTF1-205ENST00000558298 HIST2H2BDQ6DRA6 164 aa6.07□□□□□ -1.44
RTF1-205ENST00000558298 FAM110DQ8TAY7 271 aaPredicted RBP6.07□□□□□ -1.44
RTF1-205ENST00000558298 TMEM101Q96IK0 257 aa6.07□□□□□ -1.44
RTF1-205ENST00000558298 MRPL35Q9NZE8 188 aaKnown RBP6.07□□□□□ -1.44
RTF1-205ENST00000558298 PRO1854Q9UHT4 67 aa6.07□□□□□ -1.44
RTF1-205ENST00000558298 TRAV8-2A0A0B4J237 113 aa6.06□□□□□ -1.44
RTF1-205ENST00000558298 TRAV8-4A0A0B4J246 113 aa6.06□□□□□ -1.44
RTF1-205ENST00000558298 A0A0B4J2C4 111 aa6.06□□□□□ -1.44
RTF1-205ENST00000558298 G3V318 75 aa6.06□□□□□ -1.44
RTF1-205ENST00000558298 COX6CP09669 75 aa6.06□□□□□ -1.44
RTF1-205ENST00000558298 RPS28P62857 69 aaKnown RBP6.06□□□□□ -1.44
RTF1-205ENST00000558298 TMEM170BQ5T4T1 132 aa6.06□□□□□ -1.44
RTF1-205ENST00000558298 KPRPQ5T749 579 aaPredicted RBP6.06□□□□□ -1.44
RTF1-205ENST00000558298 ASPHD1Q5U4P2 390 aa6.06□□□□□ -1.44
RTF1-205ENST00000558298 C10orf99Q6UWK7 81 aa6.06□□□□□ -1.44
RTF1-205ENST00000558298 AMTNQ6UX39 209 aa6.06□□□□□ -1.44
RTF1-205ENST00000558298 NFE4Q86UQ8 179 aa6.06□□□□□ -1.44
RTF1-205ENST00000558298 ZNF491Q8N8L2 437 aa6.06□□□□□ -1.44
RTF1-205ENST00000558298 PTH2Q96A98 100 aa6.06□□□□□ -1.44
RTF1-205ENST00000558298 MRPL53Q96EL3 112 aaKnown RBP6.06□□□□□ -1.44
RTF1-205ENST00000558298 DNAJC30Q96LL9 226 aa6.06□□□□□ -1.44
RTF1-205ENST00000558298 C18orf15Q96N68 181 aa6.06□□□□□ -1.44
RTF1-205ENST00000558298 PRR25Q96S07 402 aa6.06□□□□□ -1.44
RTF1-205ENST00000558298 TRAV8-1A0A0A6YYK1 113 aa6.05□□□□□ -1.44
RTF1-205ENST00000558298 TRBV7-7A0A0K0K1E9 115 aa6.05□□□□□ -1.44
RTF1-205ENST00000558298 FAM223BA6NKX1 122 aa6.05□□□□□ -1.44
RTF1-205ENST00000558298 ZNF815PA8K554 130 aa6.05□□□□□ -1.44
RTF1-205ENST00000558298 TEX22C9J3V5 150 aa6.05□□□□□ -1.44
RTF1-205ENST00000558298 CNIH1O95406 144 aa6.05□□□□□ -1.44
RTF1-205ENST00000558298 INSL3P51460 131 aa6.05□□□□□ -1.44
RTF1-205ENST00000558298 FAM106AQ4KMX7 169 aa6.05□□□□□ -1.44
RTF1-205ENST00000558298 FAM223AQ8IWN6 122 aa6.05□□□□□ -1.44
RTF1-205ENST00000558298 SMIM20Q8N5G0 67 aa6.05□□□□□ -1.44
RTF1-205ENST00000558298 ANKRD29Q8N6D5 301 aa6.05□□□□□ -1.44
RTF1-205ENST00000558298 TOMM6Q96B49 74 aa6.05□□□□□ -1.44
RTF1-205ENST00000558298 RNF125Q96EQ8 232 aa6.05□□□□□ -1.44
RTF1-205ENST00000558298 TMEM141Q96I45 108 aa6.05□□□□□ -1.44
RTF1-205ENST00000558298 USMG5Q96IX5 58 aa6.05□□□□□ -1.44
RTF1-205ENST00000558298 LENEPQ9Y5L5 61 aa6.05□□□□□ -1.44
RTF1-205ENST00000558298 IGLV2-18A0A075B6J9 118 aa6.04□□□□□ -1.44
RTF1-205ENST00000558298 TRAV2A0A0B4J234 112 aa6.04□□□□□ -1.44
RTF1-205ENST00000558298 CGB1A6NKQ9 187 aa6.04□□□□□ -1.44
RTF1-205ENST00000558298 J3KT08 172 aa6.04□□□□□ -1.44
RTF1-205ENST00000558298 CD7P09564 240 aa6.04□□□□□ -1.44
RTF1-205ENST00000558298 MED14OSP0DP75 135 aa6.04□□□□□ -1.44
RTF1-205ENST00000558298 SMCPP49901 116 aaPredicted RBP6.04□□□□□ -1.44
RTF1-205ENST00000558298 CRIP1P50238 77 aa6.04□□□□□ -1.44
RTF1-205ENST00000558298 MLANAQ16655 118 aa6.04□□□□□ -1.44
RTF1-205ENST00000558298 ECSCRQ19T08 205 aa6.04□□□□□ -1.44
RTF1-205ENST00000558298 MEIG1Q5JSS6 88 aa6.04□□□□□ -1.44
RTF1-205ENST00000558298 EXOC3-AS1Q8N2X6 119 aa6.04□□□□□ -1.44
RTF1-205ENST00000558298 LINC00482Q8N8I6 264 aa6.04□□□□□ -1.44
RTF1-205ENST00000558298 C11orf44Q8N8P7 122 aa6.04□□□□□ -1.44
RTF1-205ENST00000558298 OR13C6PQ8NH95 151 aa6.04□□□□□ -1.44
RTF1-205ENST00000558298 RNF185Q96GF1 192 aa6.04□□□□□ -1.44
RTF1-205ENST00000558298 SGK494Q96LW2 274 aa6.04□□□□□ -1.44
RTF1-205ENST00000558298 SCGB3A1Q96QR1 104 aa6.04□□□□□ -1.44
RTF1-205ENST00000558298 SMIM2Q9BVW6 85 aa6.04□□□□□ -1.44
RTF1-205ENST00000558298 LINC00527Q9UJ94 153 aa6.04□□□□□ -1.44
RTF1-205ENST00000558298 TRBV10-2A0A0K0K1G8 114 aa6.03□□□□□ -1.44
RTF1-205ENST00000558298 H3BMM0 161 aa6.03□□□□□ -1.44
RTF1-205ENST00000558298 DUSP14O95147 198 aaKnown RBP6.03□□□□□ -1.44
RTF1-205ENST00000558298 NHLRC4P0CG21 123 aaPredicted RBP6.03□□□□□ -1.44
RTF1-205ENST00000558298 PF4V1P10720 104 aa6.03□□□□□ -1.44
RTF1-205ENST00000558298 BEAN1Q3B7T3 259 aa6.03□□□□□ -1.44
RTF1-205ENST00000558298 SLC25A29Q8N8R3 303 aa6.03□□□□□ -1.44
RTF1-205ENST00000558298 NEXN-AS1Q8NBZ9 246 aa6.03□□□□□ -1.44
RTF1-205ENST00000558298 KLHL30-AS1Q8NEE0 82 aa6.03□□□□□ -1.44
RTF1-205ENST00000558298 COPS9Q8WXC6 57 aa6.03□□□□□ -1.44
RTF1-205ENST00000558298 UBE2WQ96B02 151 aa6.03□□□□□ -1.44
RTF1-205ENST00000558298 CARD19Q96LW7 228 aa6.03□□□□□ -1.44
RTF1-205ENST00000558298 PRADC1Q9BSG0 188 aa6.03□□□□□ -1.44
RTF1-205ENST00000558298 KLK15Q9H2R5 256 aa6.03□□□□□ -1.44
RTF1-205ENST00000558298 IGLV11-55A0A075B6I3 123 aa6.02□□□□□ -1.45
RTF1-205ENST00000558298 A0A0J9YX75 114 aa6.02□□□□□ -1.45
RTF1-205ENST00000558298 TRBV30A0A0K0K1B3 111 aa6.02□□□□□ -1.45
RTF1-205ENST00000558298 C11orf86A6NJI1 115 aa6.02□□□□□ -1.45
RTF1-205ENST00000558298 E7EUB6 86 aa6.02□□□□□ -1.45
RTF1-205ENST00000558298 I3L2K1 104 aa6.02□□□□□ -1.45
RTF1-205ENST00000558298 M0R2P5 195 aa6.02□□□□□ -1.45
RTF1-205ENST00000558298 CCL24O00175 119 aa6.02□□□□□ -1.45
RTF1-205ENST00000558298 UQCRQO14949 82 aa6.02□□□□□ -1.45
RTF1-205ENST00000558298 MRPS12O15235 138 aaKnown RBP6.02□□□□□ -1.45
RTF1-205ENST00000558298 TCL1BO95988 128 aa6.02□□□□□ -1.45
RTF1-205ENST00000558298 MYOD1P15172 320 aa6.02□□□□□ -1.45
RTF1-205ENST00000558298 CXCL5P42830 114 aa6.02□□□□□ -1.45
RTF1-205ENST00000558298 NSUN5P1Q3KNT7 163 aa6.02□□□□□ -1.45
RTF1-205ENST00000558298 C10orf55Q5SWW7 151 aa6.02□□□□□ -1.45
RTF1-205ENST00000558298 FANCD2OSQ96PS1 177 aa6.02□□□□□ -1.45
RTF1-205ENST00000558298 TGP01266 2768 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 238.3 ms