RNA–Protein interactions for RNA: ENST00000557827.5

ZEB1-210, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 877 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-210ENST00000557827 TEX261Q6UWH6 196 aa3.16□□□□□ -1.9
ZEB1-210ENST00000557827 FOXI2Q6ZQN5 318 aa3.16□□□□□ -1.9
ZEB1-210ENST00000557827 ZCCHC23Q6ZST2 131 aa3.16□□□□□ -1.9
ZEB1-210ENST00000557827 ARL17AQ8IVW1 177 aa3.16□□□□□ -1.9
ZEB1-210ENST00000557827 REG4Q9BYZ8 158 aa3.16□□□□□ -1.9
ZEB1-210ENST00000557827 MPC1Q9Y5U8 109 aa3.16□□□□□ -1.9
ZEB1-210ENST00000557827 MYH9P35579 1960 aaKnown RBP3.16□□□□□ -1.9
ZEB1-210ENST00000557827 ZFHX3Q15911 3703 aa3.16□□□□□ -1.9
ZEB1-210ENST00000557827 GVINP1Q7Z2Y8 2422 aa3.15□□□□□ -1.9
ZEB1-210ENST00000557827 ANKRD36CQ5JPF3 1778 aa3.15□□□□□ -1.9
ZEB1-210ENST00000557827 FAM186AA6NE01 2351 aa3.15□□□□□ -1.9
ZEB1-210ENST00000557827 A6NN06 94 aa3.15□□□□□ -1.91
ZEB1-210ENST00000557827 RBP4P02753 201 aa3.15□□□□□ -1.91
ZEB1-210ENST00000557827 ZNF431Q8TF32 576 aaPredicted RBP3.15□□□□□ -1.91
ZEB1-210ENST00000557827 SPTA1P02549 2419 aa3.15□□□□□ -1.91
ZEB1-210ENST00000557827 SBF2Q86WG5 1849 aa3.14□□□□□ -1.91
ZEB1-210ENST00000557827 EDF1O60869 148 aaKnown RBP3.14□□□□□ -1.91
ZEB1-210ENST00000557827 DEFB103AP81534 67 aa3.14□□□□□ -1.91
ZEB1-210ENST00000557827 PLGLB1Q02325 96 aa3.14□□□□□ -1.91
ZEB1-210ENST00000557827 MIR22HGQ0VDD5 57 aa3.14□□□□□ -1.91
ZEB1-210ENST00000557827 IZUMO2Q6UXV1 221 aa3.14□□□□□ -1.91
ZEB1-210ENST00000557827 SMIM5Q71RC9 77 aa3.14□□□□□ -1.91
ZEB1-210ENST00000557827 Q8N2B8 174 aa3.14□□□□□ -1.91
ZEB1-210ENST00000557827 PATE1Q8WXA2 126 aa3.14□□□□□ -1.91
ZEB1-210ENST00000557827 CIB3Q96Q77 187 aaPredicted RBP3.14□□□□□ -1.91
ZEB1-210ENST00000557827 NHSQ6T4R5 1651 aa3.14□□□□□ -1.91
ZEB1-210ENST00000557827 ANK1P16157 1881 aa3.13□□□□□ -1.91
ZEB1-210ENST00000557827 MYOFQ9NZM1 2061 aa3.13□□□□□ -1.91
ZEB1-210ENST00000557827 AKAP11Q9UKA4 1901 aa3.13□□□□□ -1.91
ZEB1-210ENST00000557827 TRBV20-1A0A075B6N2 111 aa3.13□□□□□ -1.91
ZEB1-210ENST00000557827 IGHV1-24A0A0C4DH33 117 aa3.13□□□□□ -1.91
ZEB1-210ENST00000557827 FAM25AB3EWG3 89 aa3.13□□□□□ -1.91
ZEB1-210ENST00000557827 FAM25CB3EWG5 89 aa3.13□□□□□ -1.91
ZEB1-210ENST00000557827 FAM25GB3EWG6 89 aa3.13□□□□□ -1.91
ZEB1-210ENST00000557827 LINC00052Q96N35 136 aa3.13□□□□□ -1.91
ZEB1-210ENST00000557827 KRTAP4-4Q9BYR3 166 aa3.13□□□□□ -1.91
ZEB1-210ENST00000557827 TMEM191AQ9H0A3 160 aa3.13□□□□□ -1.91
ZEB1-210ENST00000557827 QSER1Q2KHR3 1735 aa3.13□□□□□ -1.91
ZEB1-210ENST00000557827 DDX60Q8IY21 1712 aaKnown RBP3.13□□□□□ -1.91
ZEB1-210ENST00000557827 BCORQ6W2J9 1755 aa3.12□□□□□ -1.91
ZEB1-210ENST00000557827 BTAF1O14981 1849 aa3.12□□□□□ -1.91
ZEB1-210ENST00000557827 NBEAQ8NFP9 2946 aa3.12□□□□□ -1.91
ZEB1-210ENST00000557827 SCN7AQ01118 1682 aa3.12□□□□□ -1.91
ZEB1-210ENST00000557827 FAM92AA1XBS5 289 aa3.12□□□□□ -1.91
ZEB1-210ENST00000557827 CCL16O15467 120 aa3.12□□□□□ -1.91
ZEB1-210ENST00000557827 IGF2P01344 180 aa3.12□□□□□ -1.91
ZEB1-210ENST00000557827 APOC1P02654 83 aa3.12□□□□□ -1.91
ZEB1-210ENST00000557827 SDF2Q99470 211 aa3.12□□□□□ -1.91
ZEB1-210ENST00000557827 ORMDL1Q9P0S3 153 aa3.12□□□□□ -1.91
ZEB1-210ENST00000557827 ARAP2Q8WZ64 1704 aa3.12□□□□□ -1.91
ZEB1-210ENST00000557827 EML5Q05BV3 1969 aa3.12□□□□□ -1.91
ZEB1-210ENST00000557827 CR1P17927 2039 aa3.12□□□□□ -1.91
ZEB1-210ENST00000557827 ALPK3Q96L96 1907 aa3.11□□□□□ -1.91
ZEB1-210ENST00000557827 C4BP0C0L5 1744 aa3.11□□□□□ -1.91
ZEB1-210ENST00000557827 ITPR1Q14643 2758 aa3.11□□□□□ -1.91
ZEB1-210ENST00000557827 IFITM5A6NNB3 132 aa3.11□□□□□ -1.91
ZEB1-210ENST00000557827 YPEL1O60688 119 aa3.11□□□□□ -1.91
ZEB1-210ENST00000557827 KRTAP13-4Q3LI77 160 aa3.11□□□□□ -1.91
ZEB1-210ENST00000557827 SMIM7Q9BQ49 75 aa3.11□□□□□ -1.91
ZEB1-210ENST00000557827 KLK9Q9UKQ9 250 aa3.11□□□□□ -1.91
ZEB1-210ENST00000557827 SIP14410 1827 aa3.11□□□□□ -1.91
ZEB1-210ENST00000557827 COL5A1P20908 1838 aaPredicted RBP3.11□□□□□ -1.91
ZEB1-210ENST00000557827 LY75O60449 1722 aa3.1□□□□□ -1.91
ZEB1-210ENST00000557827 PCNX2A6NKB5 2137 aa3.1□□□□□ -1.91
ZEB1-210ENST00000557827 DOCK2Q92608 1830 aa3.1□□□□□ -1.91
ZEB1-210ENST00000557827 TRGV2A0A075B6R0 118 aa3.1□□□□□ -1.91
ZEB1-210ENST00000557827 F8W1H4 67 aa3.1□□□□□ -1.91
ZEB1-210ENST00000557827 GUCA1AP43080 201 aaPredicted RBP3.1□□□□□ -1.91
ZEB1-210ENST00000557827 FAM74A1Q5RGS3 127 aa3.1□□□□□ -1.91
ZEB1-210ENST00000557827 C15orf53Q8NAA6 179 aa3.1□□□□□ -1.91
ZEB1-210ENST00000557827 CACNA1HO95180 2353 aa3.1□□□□□ -1.91
ZEB1-210ENST00000557827 TIAM2Q8IVF5 1701 aa3.1□□□□□ -1.91
ZEB1-210ENST00000557827 DUOX1Q9NRD9 1551 aa3.09□□□□□ -1.91
ZEB1-210ENST00000557827 VPS13AQ96RL7 3174 aa3.09□□□□□ -1.91
ZEB1-210ENST00000557827 TLN1Q9Y490 2541 aaKnown RBP3.09□□□□□ -1.91
ZEB1-210ENST00000557827 A0A0G2JMM0 328 aa3.09□□□□□ -1.91
ZEB1-210ENST00000557827 A0A1W2PPB8 328 aa3.09□□□□□ -1.91
ZEB1-210ENST00000557827 KIR3DP1A8MWS1 328 aa3.09□□□□□ -1.91
ZEB1-210ENST00000557827 COX7CP15954 63 aa3.09□□□□□ -1.91
ZEB1-210ENST00000557827 ATOH7Q8N100 152 aa3.09□□□□□ -1.91
ZEB1-210ENST00000557827 OR10AG1Q8NH19 301 aa3.09□□□□□ -1.91
ZEB1-210ENST00000557827 ZNF625Q96I27 306 aaPredicted RBP3.09□□□□□ -1.91
ZEB1-210ENST00000557827 NBEAL1Q6ZS30 2694 aa3.09□□□□□ -1.91
ZEB1-210ENST00000557827 LAMA4Q16363 1823 aa3.09□□□□□ -1.92
ZEB1-210ENST00000557827 LOC400499M0QZD8 3231 aa3.08□□□□□ -1.92
ZEB1-210ENST00000557827 COL4A1P02462 1669 aa3.08□□□□□ -1.92
ZEB1-210ENST00000557827 KIAA1551Q9HCM1 1747 aa3.08□□□□□ -1.92
ZEB1-210ENST00000557827 UBR3Q6ZT12 1888 aa3.08□□□□□ -1.92
ZEB1-210ENST00000557827 JMJD1CQ15652 2540 aa3.08□□□□□ -1.92
ZEB1-210ENST00000557827 M0R2P5 195 aa3.08□□□□□ -1.92
ZEB1-210ENST00000557827 CDC42EP2O14613 210 aa3.08□□□□□ -1.92
ZEB1-210ENST00000557827 CCSMST1Q4G0I0 132 aa3.08□□□□□ -1.92
ZEB1-210ENST00000557827 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.08□□□□□ -1.92
ZEB1-210ENST00000557827 ZCCHC13Q8WW36 166 aaKnown RBP3.08□□□□□ -1.92
ZEB1-210ENST00000557827 SAR1AQ9NR31 198 aa3.08□□□□□ -1.92
ZEB1-210ENST00000557827 TCHHQ07283 1943 aa3.08□□□□□ -1.92
ZEB1-210ENST00000557827 NOTCH1P46531 2555 aa3.08□□□□□ -1.92
ZEB1-210ENST00000557827 PLIN4Q96Q06 1357 aa3.08□□□□□ -1.92
ZEB1-210ENST00000557827 UNC13CQ8NB66 2214 aa3.08□□□□□ -1.92
ZEB1-210ENST00000557827 C4AP0C0L4 1744 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms