RNA–Protein interactions for RNA: ENST00000557626.5

TMEM260-215, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 1,262 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-215ENST00000557626 Q6ZTI0 123 aa8.69□□□□□ -1.02
TMEM260-215ENST00000557626 CLRN3Q8NCR9 226 aa8.69□□□□□ -1.02
TMEM260-215ENST00000557626 IL36BQ9NZH7 164 aa8.69□□□□□ -1.02
TMEM260-215ENST00000557626 MUC21A0A0G2JKD1 596 aa8.68□□□□□ -1.02
TMEM260-215ENST00000557626 MUC21A0A140T8X8 626 aa8.68□□□□□ -1.02
TMEM260-215ENST00000557626 C7orf77A4D0Y5 90 aa8.68□□□□□ -1.02
TMEM260-215ENST00000557626 FOXA3P55318 350 aaPredicted RBP8.68□□□□□ -1.02
TMEM260-215ENST00000557626 RPS20P60866 119 aaKnown RBP8.68□□□□□ -1.02
TMEM260-215ENST00000557626 ZNF415Q09FC8 603 aa8.68□□□□□ -1.02
TMEM260-215ENST00000557626 OR10AG1Q8NH19 301 aa8.68□□□□□ -1.02
TMEM260-215ENST00000557626 MRPL16Q9NX20 251 aaKnown RBP8.68□□□□□ -1.02
TMEM260-215ENST00000557626 SMIM27A0A1W2PRY6 76 aa8.67□□□□□ -1.02
TMEM260-215ENST00000557626 OR5AL1P0C617 328 aa8.67□□□□□ -1.02
TMEM260-215ENST00000557626 CTRLP40313 264 aa8.67□□□□□ -1.02
TMEM260-215ENST00000557626 LYZL1Q6UWQ5 148 aa8.67□□□□□ -1.02
TMEM260-215ENST00000557626 C15orf54Q8N8G6 183 aa8.67□□□□□ -1.02
TMEM260-215ENST00000557626 TSKUQ8WUA8 353 aa8.67□□□□□ -1.02
TMEM260-215ENST00000557626 PTH2Q96A98 100 aa8.67□□□□□ -1.02
TMEM260-215ENST00000557626 VSIG2Q96IQ7 327 aa8.67□□□□□ -1.02
TMEM260-215ENST00000557626 A8MWL6 223 aa8.66□□□□□ -1.02
TMEM260-215ENST00000557626 CRYGDP07320 174 aa8.66□□□□□ -1.02
TMEM260-215ENST00000557626 C10orf126Q8N4M7 172 aa8.66□□□□□ -1.02
TMEM260-215ENST00000557626 FER1L6-AS1Q8NA97 138 aa8.66□□□□□ -1.02
TMEM260-215ENST00000557626 RASL10AQ92737 203 aa8.66□□□□□ -1.02
TMEM260-215ENST00000557626 SPXQ9BT56 116 aa8.66□□□□□ -1.02
TMEM260-215ENST00000557626 JPT2Q9H910 190 aa8.66□□□□□ -1.02
TMEM260-215ENST00000557626 GAGE12BA1L429 117 aa8.65□□□□□ -1.02
TMEM260-215ENST00000557626 SNURFLB1AK76 121 aa8.65□□□□□ -1.02
TMEM260-215ENST00000557626 M0R2P5 195 aa8.65□□□□□ -1.02
TMEM260-215ENST00000557626 GAGE7O76087 117 aa8.65□□□□□ -1.02
TMEM260-215ENST00000557626 MT-ND4LP03901 98 aa8.65□□□□□ -1.02
TMEM260-215ENST00000557626 GAGE12FP0CL80 117 aa8.65□□□□□ -1.02
TMEM260-215ENST00000557626 GAGE12GP0CL81 117 aa8.65□□□□□ -1.02
TMEM260-215ENST00000557626 GAGE12IP0CL82 117 aa8.65□□□□□ -1.02
TMEM260-215ENST00000557626 NUP35Q8NFH5 326 aa8.65□□□□□ -1.02
TMEM260-215ENST00000557626 PGLYRP4Q96LB8 373 aa8.65□□□□□ -1.02
TMEM260-215ENST00000557626 CNFNQ9BYD5 112 aa8.65□□□□□ -1.02
TMEM260-215ENST00000557626 GFRA4Q9GZZ7 299 aa8.65□□□□□ -1.02
TMEM260-215ENST00000557626 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.64□□□□□ -1.03
TMEM260-215ENST00000557626 A0A087WWC5 75 aa8.64□□□□□ -1.03
TMEM260-215ENST00000557626 TRGV1A0A0A0MS02 117 aa8.64□□□□□ -1.03
TMEM260-215ENST00000557626 FAM231BA6NCW3 169 aa8.64□□□□□ -1.03
TMEM260-215ENST00000557626 HIGD1CA8MV81 97 aa8.64□□□□□ -1.03
TMEM260-215ENST00000557626 S100A4P26447 101 aaKnown RBP8.64□□□□□ -1.03
TMEM260-215ENST00000557626 WFDC10BQ8IUB3 73 aa8.64□□□□□ -1.03
TMEM260-215ENST00000557626 SVBPQ8N300 66 aa8.64□□□□□ -1.03
TMEM260-215ENST00000557626 ANAPC16Q96DE5 110 aa8.64□□□□□ -1.03
TMEM260-215ENST00000557626 SAMD10Q9BYL1 202 aa8.64□□□□□ -1.03
TMEM260-215ENST00000557626 XKRY2A2RUG3 117 aa8.63□□□□□ -1.03
TMEM260-215ENST00000557626 PPP1R2P9O14990 202 aa8.63□□□□□ -1.03
TMEM260-215ENST00000557626 ATP6V1G1O75348 118 aa8.63□□□□□ -1.03
TMEM260-215ENST00000557626 RHEBQ15382 184 aa8.63□□□□□ -1.03
TMEM260-215ENST00000557626 ZNF876PQ49A33 203 aa8.63□□□□□ -1.03
TMEM260-215ENST00000557626 UFSP1Q6NVU6 142 aa8.63□□□□□ -1.03
TMEM260-215ENST00000557626 CTDSP1Q9GZU7 261 aa8.63□□□□□ -1.03
TMEM260-215ENST00000557626 ICOSQ9Y6W8 199 aa8.63□□□□□ -1.03
TMEM260-215ENST00000557626 KIF25-AS1Q9Y6Z4 181 aa8.63□□□□□ -1.03
TMEM260-215ENST00000557626 M0R381 172 aa8.62□□□□□ -1.03
TMEM260-215ENST00000557626 SNAPINO95295 136 aa8.62□□□□□ -1.03
TMEM260-215ENST00000557626 NTF3P20783 257 aa8.62□□□□□ -1.03
TMEM260-215ENST00000557626 SSTP61278 116 aa8.62□□□□□ -1.03
TMEM260-215ENST00000557626 WDR73Q6P4I2 378 aa8.62□□□□□ -1.03
TMEM260-215ENST00000557626 LYPD5Q6UWN5 251 aa8.62□□□□□ -1.03
TMEM260-215ENST00000557626 YPEL4Q96NS1 127 aa8.62□□□□□ -1.03
TMEM260-215ENST00000557626 TPPP3Q9BW30 176 aa8.62□□□□□ -1.03
TMEM260-215ENST00000557626 RPS10P5Q9NQ39 176 aa8.62□□□□□ -1.03
TMEM260-215ENST00000557626 TMEM242Q9NWH2 141 aa8.62□□□□□ -1.03
TMEM260-215ENST00000557626 PHLDA3Q9Y5J5 127 aa8.62□□□□□ -1.03
TMEM260-215ENST00000557626 A0A1B0GXF2 115 aa8.61□□□□□ -1.03
TMEM260-215ENST00000557626 F2Z2F3 143 aa8.61□□□□□ -1.03
TMEM260-215ENST00000557626 WFDC2Q14508 124 aa8.61□□□□□ -1.03
TMEM260-215ENST00000557626 PIK3CD-AS1Q5SR53 167 aa8.61□□□□□ -1.03
TMEM260-215ENST00000557626 CFAP126Q5VTH2 177 aa8.61□□□□□ -1.03
TMEM260-215ENST00000557626 ZFP82Q8N141 532 aa8.61□□□□□ -1.03
TMEM260-215ENST00000557626 ZNF479Q96JC4 524 aa8.61□□□□□ -1.03
TMEM260-215ENST00000557626 LINC01600Q96MT4 127 aa8.6□□□□□ -1.03
TMEM260-215ENST00000557626 Q9HAA7 133 aa8.6□□□□□ -1.03
TMEM260-215ENST00000557626 NAT8BQ9UHF3 227 aa8.6□□□□□ -1.03
TMEM260-215ENST00000557626 A0A1B0GUT8 65 aa8.59□□□□□ -1.03
TMEM260-215ENST00000557626 IGHV3-53P01767 116 aa8.59□□□□□ -1.03
TMEM260-215ENST00000557626 CACNG7P62955 275 aa8.59□□□□□ -1.03
TMEM260-215ENST00000557626 FHL2Q14192 279 aa8.59□□□□□ -1.03
TMEM260-215ENST00000557626 SPANXN1Q5VSR9 72 aa8.59□□□□□ -1.03
TMEM260-215ENST00000557626 IMMP2LQ96T52 175 aa8.59□□□□□ -1.03
TMEM260-215ENST00000557626 Q9UF83 564 aa8.59□□□□□ -1.03
TMEM260-215ENST00000557626 A0A087WWL8 130 aa8.58□□□□□ -1.04
TMEM260-215ENST00000557626 TRAV4A0A0B4J268 109 aa8.58□□□□□ -1.04
TMEM260-215ENST00000557626 SCO1O75880 301 aa8.58□□□□□ -1.04
TMEM260-215ENST00000557626 CBLN2Q8IUK8 224 aa8.58□□□□□ -1.04
TMEM260-215ENST00000557626 C14orf178Q8N769 122 aaPredicted RBP8.58□□□□□ -1.04
TMEM260-215ENST00000557626 TRGV2A0A075B6R0 118 aa8.57□□□□□ -1.04
TMEM260-215ENST00000557626 IGHV3-73A0A0B4J1V6 119 aa8.57□□□□□ -1.04
TMEM260-215ENST00000557626 LECT2O14960 151 aa8.57□□□□□ -1.04
TMEM260-215ENST00000557626 TWIST1Q15672 202 aa8.57□□□□□ -1.04
TMEM260-215ENST00000557626 MRPL54Q6P161 138 aaKnown RBP8.57□□□□□ -1.04
TMEM260-215ENST00000557626 GATD1Q8NB37 220 aa8.57□□□□□ -1.04
TMEM260-215ENST00000557626 URGCP-MRPS24S4R325 110 aa8.57□□□□□ -1.04
TMEM260-215ENST00000557626 A8MWV9 139 aa8.56□□□□□ -1.04
TMEM260-215ENST00000557626 PAX4O43316 350 aa8.56□□□□□ -1.04
TMEM260-215ENST00000557626 ELOBQ15370 118 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms