RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 ACOT6Q3I5F7 207 aaPredicted RBP3.96□□□□□ -1.78
VPS33B-207ENST00000557470 PDZD11Q5EBL8 140 aa3.96□□□□□ -1.78
VPS33B-207ENST00000557470 FFAR4Q5NUL3 377 aa3.96□□□□□ -1.78
VPS33B-207ENST00000557470 GFI1BQ5VTD9 330 aa3.96□□□□□ -1.78
VPS33B-207ENST00000557470 Q6ZTI0 123 aa3.96□□□□□ -1.78
VPS33B-207ENST00000557470 LYZL2Q7Z4W2 148 aa3.96□□□□□ -1.78
VPS33B-207ENST00000557470 MPLKIPQ8TAP9 179 aa3.96□□□□□ -1.78
VPS33B-207ENST00000557470 SHANK2-AS3Q9BTD1 123 aa3.96□□□□□ -1.78
VPS33B-207ENST00000557470 SHPKQ9UHJ6 478 aa3.96□□□□□ -1.78
VPS33B-207ENST00000557470 TNFSF18Q9UNG2 199 aa3.96□□□□□ -1.78
VPS33B-207ENST00000557470 IGLV5-37A0A075B6J1 123 aa3.95□□□□□ -1.78
VPS33B-207ENST00000557470 KRTAP29-1A8MX34 341 aaPredicted RBP3.95□□□□□ -1.78
VPS33B-207ENST00000557470 K7EPK0 472 aa3.95□□□□□ -1.78
VPS33B-207ENST00000557470 TAAR5O14804 337 aa3.95□□□□□ -1.78
VPS33B-207ENST00000557470 MRPS12O15235 138 aaKnown RBP3.95□□□□□ -1.78
VPS33B-207ENST00000557470 NDUFB6O95139 128 aa3.95□□□□□ -1.78
VPS33B-207ENST00000557470 TRGC1P0CF51 173 aa3.95□□□□□ -1.78
VPS33B-207ENST00000557470 RPL7P18124 248 aaKnown RBP3.95□□□□□ -1.78
VPS33B-207ENST00000557470 RPL32P62910 135 aaKnown RBP3.95□□□□□ -1.78
VPS33B-207ENST00000557470 AKR1C1Q04828 323 aa3.95□□□□□ -1.78
VPS33B-207ENST00000557470 TMEM128Q5BJH2 165 aa3.95□□□□□ -1.78
VPS33B-207ENST00000557470 TEX43Q6ZNM6 134 aa3.95□□□□□ -1.78
VPS33B-207ENST00000557470 FA2HQ7L5A8 372 aa3.95□□□□□ -1.78
VPS33B-207ENST00000557470 NFE4Q86UQ8 179 aa3.95□□□□□ -1.78
VPS33B-207ENST00000557470 VAMP8Q9BV40 100 aa3.95□□□□□ -1.78
VPS33B-207ENST00000557470 MRPL16Q9NX20 251 aaKnown RBP3.95□□□□□ -1.78
VPS33B-207ENST00000557470 HIGD1AQ9Y241 93 aa3.95□□□□□ -1.78
VPS33B-207ENST00000557470 LAMTOR2Q9Y2Q5 125 aa3.95□□□□□ -1.78
VPS33B-207ENST00000557470 TRBV24-1A0A075B6N3 115 aa3.94□□□□□ -1.78
VPS33B-207ENST00000557470 TRGV2A0A075B6R0 118 aa3.94□□□□□ -1.78
VPS33B-207ENST00000557470 UMAD1C9J7I0 102 aa3.94□□□□□ -1.78
VPS33B-207ENST00000557470 PRAC2D3DTV9 90 aa3.94□□□□□ -1.78
VPS33B-207ENST00000557470 PITX3O75364 302 aa3.94□□□□□ -1.78
VPS33B-207ENST00000557470 HYPMO75409 117 aa3.94□□□□□ -1.78
VPS33B-207ENST00000557470 GNG4P50150 75 aa3.94□□□□□ -1.78
VPS33B-207ENST00000557470 TAS2R30P59541 319 aa3.94□□□□□ -1.78
VPS33B-207ENST00000557470 SRPXP78539 464 aa3.94□□□□□ -1.78
VPS33B-207ENST00000557470 DAZ2Q13117 558 aaKnown RBP3.94□□□□□ -1.78
VPS33B-207ENST00000557470 FER1L6-AS1Q8NA97 138 aa3.94□□□□□ -1.78
VPS33B-207ENST00000557470 SLC25A21Q9BQT8 299 aaPredicted RBP3.94□□□□□ -1.78
VPS33B-207ENST00000557470 LINC00467Q9BRT7 94 aa3.94□□□□□ -1.78
VPS33B-207ENST00000557470 TMEM70Q9BUB7 260 aa3.94□□□□□ -1.78
VPS33B-207ENST00000557470 ICOSQ9Y6W8 199 aa3.94□□□□□ -1.78
VPS33B-207ENST00000557470 TRGV1A0A0A0MS02 117 aa3.93□□□□□ -1.78
VPS33B-207ENST00000557470 TRAV12-3A0A0B4J271 114 aa3.93□□□□□ -1.78
VPS33B-207ENST00000557470 PMS2P5A8MQ11 134 aa3.93□□□□□ -1.78
VPS33B-207ENST00000557470 ZNF324O75467 553 aaPredicted RBP3.93□□□□□ -1.78
VPS33B-207ENST00000557470 IFNA1P01562 189 aa3.93□□□□□ -1.78
VPS33B-207ENST00000557470 LINC00869P0C866 280 aa3.93□□□□□ -1.78
VPS33B-207ENST00000557470 CT45A10P0DMU9 189 aa3.93□□□□□ -1.78
VPS33B-207ENST00000557470 ATP6V0CP27449 155 aa3.93□□□□□ -1.78
VPS33B-207ENST00000557470 SULT1A2P50226 295 aa3.93□□□□□ -1.78
VPS33B-207ENST00000557470 CYCSP99999 105 aaKnown RBP3.93□□□□□ -1.78
VPS33B-207ENST00000557470 ELOBQ15370 118 aa3.93□□□□□ -1.78
VPS33B-207ENST00000557470 KRTAP15-1Q3LI76 137 aa3.93□□□□□ -1.78
VPS33B-207ENST00000557470 LYPD5Q6UWN5 251 aa3.93□□□□□ -1.78
VPS33B-207ENST00000557470 CYP2G1PQ6ZSU1 146 aa3.93□□□□□ -1.78
VPS33B-207ENST00000557470 WFDC10BQ8IUB3 73 aa3.93□□□□□ -1.78
VPS33B-207ENST00000557470 C11orf72Q8NBR9 251 aa3.93□□□□□ -1.78
VPS33B-207ENST00000557470 OR5A1Q8NGJ0 315 aa3.93□□□□□ -1.78
VPS33B-207ENST00000557470 SCGB3A2Q96PL1 93 aa3.93□□□□□ -1.78
VPS33B-207ENST00000557470 ZNF331Q9NQX6 463 aaPredicted RBP3.93□□□□□ -1.78
VPS33B-207ENST00000557470 FUT9Q9Y231 359 aa3.93□□□□□ -1.78
VPS33B-207ENST00000557470 LY96Q9Y6Y9 160 aa3.93□□□□□ -1.78
VPS33B-207ENST00000557470 TRAV9-2A0A087WT02 112 aa3.92□□□□□ -1.78
VPS33B-207ENST00000557470 IGLV5-39A0A0G2JS06 123 aa3.92□□□□□ -1.78
VPS33B-207ENST00000557470 LRCOL1A6NCL2 159 aa3.92□□□□□ -1.78
VPS33B-207ENST00000557470 H3BP45 60 aa3.92□□□□□ -1.78
VPS33B-207ENST00000557470 SYNGR2O43760 224 aa3.92□□□□□ -1.78
VPS33B-207ENST00000557470 OXTP01178 125 aa3.92□□□□□ -1.78
VPS33B-207ENST00000557470 IGHV3-53P01767 116 aa3.92□□□□□ -1.78
VPS33B-207ENST00000557470 TRGC2P03986 189 aa3.92□□□□□ -1.78
VPS33B-207ENST00000557470 HSD52Q0P140 79 aa3.92□□□□□ -1.78
VPS33B-207ENST00000557470 PPP1R1AQ13522 171 aa3.92□□□□□ -1.78
VPS33B-207ENST00000557470 SPANXN5Q5MJ07 72 aa3.92□□□□□ -1.78
VPS33B-207ENST00000557470 MRPL54Q6P161 138 aaKnown RBP3.92□□□□□ -1.78
VPS33B-207ENST00000557470 LCN15Q6UWW0 184 aa3.92□□□□□ -1.78
VPS33B-207ENST00000557470 PATE2Q6UY27 113 aa3.92□□□□□ -1.78
VPS33B-207ENST00000557470 FAM218AQ96MZ4 157 aa3.92□□□□□ -1.78
VPS33B-207ENST00000557470 PYGO2Q9BRQ0 406 aa3.92□□□□□ -1.78
VPS33B-207ENST00000557470 TMEM126AQ9H061 195 aa3.92□□□□□ -1.78
VPS33B-207ENST00000557470 SPANXB1Q9NS25 103 aaPredicted RBP3.92□□□□□ -1.78
VPS33B-207ENST00000557470 HSPB8Q9UJY1 196 aa3.92□□□□□ -1.78
VPS33B-207ENST00000557470 ERG28Q9UKR5 140 aa3.92□□□□□ -1.78
VPS33B-207ENST00000557470 PSG8Q9UQ74 426 aa3.92□□□□□ -1.78
VPS33B-207ENST00000557470 KLF12Q9Y4X4 402 aa3.92□□□□□ -1.78
VPS33B-207ENST00000557470 LRP1Q07954 4544 aaKnown RBP3.92□□□□□ -1.78
VPS33B-207ENST00000557470 BORCS7-ASMTA0A0B4J1R7 106 aa3.91□□□□□ -1.78
VPS33B-207ENST00000557470 DUXBA0A1W2PPF3 345 aa3.91□□□□□ -1.78
VPS33B-207ENST00000557470 SPINK4O60575 86 aa3.91□□□□□ -1.78
VPS33B-207ENST00000557470 SFT2D2O95562 160 aa3.91□□□□□ -1.78
VPS33B-207ENST00000557470 CRYGDP07320 174 aa3.91□□□□□ -1.78
VPS33B-207ENST00000557470 SLC25A6P12236 298 aa3.91□□□□□ -1.78
VPS33B-207ENST00000557470 EVI2AP22794 236 aa3.91□□□□□ -1.78
VPS33B-207ENST00000557470 OR10J3Q5JRS4 329 aa3.91□□□□□ -1.78
VPS33B-207ENST00000557470 C10orf25Q5T742 122 aa3.91□□□□□ -1.78
VPS33B-207ENST00000557470 MORN5Q5VZ52 161 aa3.91□□□□□ -1.78
VPS33B-207ENST00000557470 NEGR1Q7Z3B1 354 aa3.91□□□□□ -1.78
VPS33B-207ENST00000557470 SMIM20Q8N5G0 67 aa3.91□□□□□ -1.78
VPS33B-207ENST00000557470 STPG4Q8N801 248 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms