RNA–Protein interactions for RNA: ENST00000557159.5

APEX1-216, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 2

Gene APEX1, Length 1,803 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-216ENST00000557159 CSMD1Q96PZ7 3565 aa9.43□□□□□ -0.9
APEX1-216ENST00000557159 TRBV27A0A0K0K1C4 114 aa9.43□□□□□ -0.9
APEX1-216ENST00000557159 TRBV10-2A0A0K0K1G8 114 aa9.43□□□□□ -0.9
APEX1-216ENST00000557159 FAM240AA0A1B0GVK7 77 aa9.43□□□□□ -0.9
APEX1-216ENST00000557159 LGALS3P17931 250 aaKnown RBP9.43□□□□□ -0.9
APEX1-216ENST00000557159 SFTA2Q6UW10 78 aa9.43□□□□□ -0.9
APEX1-216ENST00000557159 Q8N1Y9 231 aa9.43□□□□□ -0.9
APEX1-216ENST00000557159 SIRPDQ9H106 197 aa9.43□□□□□ -0.9
APEX1-216ENST00000557159 IGHV3OR16-8A0A075B7F1 116 aa9.42□□□□□ -0.9
APEX1-216ENST00000557159 A4D1N5 150 aa9.42□□□□□ -0.9
APEX1-216ENST00000557159 B5MCH6 92 aa9.42□□□□□ -0.9
APEX1-216ENST00000557159 RNASE3P12724 160 aaKnown RBP9.42□□□□□ -0.9
APEX1-216ENST00000557159 LINC01620Q4KN68 170 aa9.42□□□□□ -0.9
APEX1-216ENST00000557159 TTC32Q5I0X7 151 aa9.42□□□□□ -0.9
APEX1-216ENST00000557159 Q6ZQT7 251 aa9.42□□□□□ -0.9
APEX1-216ENST00000557159 OR10J6PQ8NGY7 276 aa9.42□□□□□ -0.9
APEX1-216ENST00000557159 ZNRF2Q8NHG8 242 aa9.42□□□□□ -0.9
APEX1-216ENST00000557159 CCL19Q99731 98 aa9.42□□□□□ -0.9
APEX1-216ENST00000557159 IGHV3-35A0A0C4DH35 117 aa9.42□□□□□ -0.9
APEX1-216ENST00000557159 SOCS3O14543 225 aa9.42□□□□□ -0.9
APEX1-216ENST00000557159 MGPP08493 103 aa9.42□□□□□ -0.9
APEX1-216ENST00000557159 ZFP36P26651 326 aaKnown RBP9.42□□□□□ -0.9
APEX1-216ENST00000557159 RHOHQ15669 191 aa9.42□□□□□ -0.9
APEX1-216ENST00000557159 ANXA2RQ3ZCQ2 193 aa9.42□□□□□ -0.9
APEX1-216ENST00000557159 SPANXDQ9BXN6 97 aa9.42□□□□□ -0.9
APEX1-216ENST00000557159 PDZD2O15018 2839 aa9.41□□□□□ -0.9
APEX1-216ENST00000557159 TRAV4A0A0B4J268 109 aa9.41□□□□□ -0.9
APEX1-216ENST00000557159 TMEM223A0PJW6 202 aa9.41□□□□□ -0.9
APEX1-216ENST00000557159 DEFB121Q5J5C9 76 aa9.41□□□□□ -0.9
APEX1-216ENST00000557159 CFAP161Q6P656 301 aa9.41□□□□□ -0.9
APEX1-216ENST00000557159 CLEC19AQ6UXS0 136 aa9.41□□□□□ -0.9
APEX1-216ENST00000557159 VPS13CQ709C8 3753 aa9.41□□□□□ -0.9
APEX1-216ENST00000557159 MAP1AP78559 2803 aaPredicted RBP9.41□□□□□ -0.9
APEX1-216ENST00000557159 H3BT86 120 aa9.4□□□□□ -0.9
APEX1-216ENST00000557159 LGALS9O00182 355 aa9.4□□□□□ -0.9
APEX1-216ENST00000557159 EIF4EBP3O60516 100 aaPredicted RBP9.4□□□□□ -0.9
APEX1-216ENST00000557159 NSUN5P1Q3KNT7 163 aa9.4□□□□□ -0.9
APEX1-216ENST00000557159 TMEM170BQ5T4T1 132 aa9.4□□□□□ -0.9
APEX1-216ENST00000557159 C20orf173Q96LM9 149 aa9.4□□□□□ -0.9
APEX1-216ENST00000557159 ODF3Q96PU9 254 aa9.4□□□□□ -0.9
APEX1-216ENST00000557159 WNK2Q9Y3S1 2297 aa9.4□□□□□ -0.91
APEX1-216ENST00000557159 TRAV8-4A0A0B4J246 113 aa9.4□□□□□ -0.91
APEX1-216ENST00000557159 IGHV3-66A0A0C4DH42 116 aa9.4□□□□□ -0.91
APEX1-216ENST00000557159 M0R2P5 195 aa9.4□□□□□ -0.91
APEX1-216ENST00000557159 ATP6V0E1O15342 81 aa9.4□□□□□ -0.91
APEX1-216ENST00000557159 CRIP2P52943 208 aaPredicted RBP9.4□□□□□ -0.91
APEX1-216ENST00000557159 LMO4P61968 165 aa9.4□□□□□ -0.91
APEX1-216ENST00000557159 NTN5Q8WTR8 489 aaPredicted RBP9.4□□□□□ -0.91
APEX1-216ENST00000557159 MDFICQ9P1T7 246 aa9.4□□□□□ -0.91
APEX1-216ENST00000557159 ARHGAP32A7KAX9 2087 aa9.39□□□□□ -0.91
APEX1-216ENST00000557159 FAM223BA6NKX1 122 aa9.39□□□□□ -0.91
APEX1-216ENST00000557159 FAM223AQ8IWN6 122 aa9.39□□□□□ -0.91
APEX1-216ENST00000557159 H3BMM0 161 aa9.38□□□□□ -0.91
APEX1-216ENST00000557159 ECSCRQ19T08 205 aa9.38□□□□□ -0.91
APEX1-216ENST00000557159 TRPT1Q86TN4 253 aaKnown RBP9.38□□□□□ -0.91
APEX1-216ENST00000557159 UBE2WQ96B02 151 aa9.38□□□□□ -0.91
APEX1-216ENST00000557159 CRLF1O75462 422 aa9.38□□□□□ -0.91
APEX1-216ENST00000557159 BRI3O95415 125 aa9.38□□□□□ -0.91
APEX1-216ENST00000557159 IGF1P05019 195 aa9.38□□□□□ -0.91
APEX1-216ENST00000557159 SUMO4Q6EEV6 95 aa9.38□□□□□ -0.91
APEX1-216ENST00000557159 BPESC1Q9GZL8 116 aa9.38□□□□□ -0.91
APEX1-216ENST00000557159 ITPR3Q14573 2671 aa9.37□□□□□ -0.91
APEX1-216ENST00000557159 MUC4Q99102 2169 aa9.37□□□□□ -0.91
APEX1-216ENST00000557159 KLLNB2CW77 178 aa9.37□□□□□ -0.91
APEX1-216ENST00000557159 NDUFA4O00483 81 aa9.37□□□□□ -0.91
APEX1-216ENST00000557159 IGHV4-39P01824 125 aa9.37□□□□□ -0.91
APEX1-216ENST00000557159 RNASE4P34096 147 aaKnown RBP9.37□□□□□ -0.91
APEX1-216ENST00000557159 KRTAP21-3Q3LHN1 58 aa9.37□□□□□ -0.91
APEX1-216ENST00000557159 C19orf54Q5BKX5 351 aa9.37□□□□□ -0.91
APEX1-216ENST00000557159 MUSTN1Q8IVN3 82 aa9.37□□□□□ -0.91
APEX1-216ENST00000557159 BEX4Q9NWD9 120 aaPredicted RBP9.37□□□□□ -0.91
APEX1-216ENST00000557159 IGHV3OR16-13A0A075B7E8 117 aa9.36□□□□□ -0.91
APEX1-216ENST00000557159 IGHV3-74A0A0B4J1X5 117 aa9.36□□□□□ -0.91
APEX1-216ENST00000557159 TRBV7-7A0A0K0K1E9 115 aa9.36□□□□□ -0.91
APEX1-216ENST00000557159 CCDC179H3BU77 68 aa9.36□□□□□ -0.91
APEX1-216ENST00000557159 ATP5J2P56134 94 aa9.36□□□□□ -0.91
APEX1-216ENST00000557159 RPL39P62891 51 aaKnown RBP9.36□□□□□ -0.91
APEX1-216ENST00000557159 DEFB113Q30KQ7 82 aa9.36□□□□□ -0.91
APEX1-216ENST00000557159 C15orf53Q8NAA6 179 aa9.36□□□□□ -0.91
APEX1-216ENST00000557159 PIMREGQ9BSJ6 248 aa9.36□□□□□ -0.91
APEX1-216ENST00000557159 ZNF22P17026 224 aaPredicted RBP9.35□□□□□ -0.91
APEX1-216ENST00000557159 ARL3P36405 182 aa9.35□□□□□ -0.91
APEX1-216ENST00000557159 LRRC75A-AS1Q8N1F1 130 aa9.35□□□□□ -0.91
APEX1-216ENST00000557159 SPANXCQ9NY87 97 aa9.35□□□□□ -0.91
APEX1-216ENST00000557159 NPFFO15130 113 aa9.35□□□□□ -0.91
APEX1-216ENST00000557159 GNRH2O43555 120 aa9.35□□□□□ -0.91
APEX1-216ENST00000557159 EMP1P54849 157 aa9.35□□□□□ -0.91
APEX1-216ENST00000557159 IMUPQ9GZP8 106 aa9.35□□□□□ -0.91
APEX1-216ENST00000557159 TMEM126AQ9H061 195 aa9.35□□□□□ -0.91
APEX1-216ENST00000557159 CCDC168Q8NDH2 2452 aa9.35□□□□□ -0.91
APEX1-216ENST00000557159 TRAV2A0A0B4J234 112 aa9.34□□□□□ -0.91
APEX1-216ENST00000557159 A0A0J9YXY3 114 aa9.34□□□□□ -0.91
APEX1-216ENST00000557159 TEX49A0A1B0GTD5 131 aa9.34□□□□□ -0.91
APEX1-216ENST00000557159 TGFAP01135 160 aa9.34□□□□□ -0.91
APEX1-216ENST00000557159 COX6CP09669 75 aa9.34□□□□□ -0.91
APEX1-216ENST00000557159 SAA4P35542 130 aa9.34□□□□□ -0.91
APEX1-216ENST00000557159 IGHV3-49A0A0A0MS15 119 aa9.33□□□□□ -0.92
APEX1-216ENST00000557159 TRIAP1O43715 76 aa9.33□□□□□ -0.92
APEX1-216ENST00000557159 LITAFQ99732 161 aa9.33□□□□□ -0.92
APEX1-216ENST00000557159 PYGO1Q9Y3Y4 419 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms