RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-223ENST00000557076 ANKRD20A5PA0PJZ0 165 aa2.8□□□□□ -1.96
SCFD1-223ENST00000557076 SSSCA1O60232 199 aa2.8□□□□□ -1.96
SCFD1-223ENST00000557076 SFT2D2O95562 160 aa2.8□□□□□ -1.96
SCFD1-223ENST00000557076 S100A5P33763 92 aa2.8□□□□□ -1.96
SCFD1-223ENST00000557076 UBE2D3P61077 147 aa2.8□□□□□ -1.96
SCFD1-223ENST00000557076 LSM3P62310 102 aaKnown RBP2.8□□□□□ -1.96
SCFD1-223ENST00000557076 RANP62826 216 aaKnown RBP2.8□□□□□ -1.96
SCFD1-223ENST00000557076 UBE2D2P62837 147 aa2.8□□□□□ -1.96
SCFD1-223ENST00000557076 LINC00469Q8N7U9 141 aa2.8□□□□□ -1.96
SCFD1-223ENST00000557076 OR10G8Q8NGN5 311 aa2.8□□□□□ -1.96
SCFD1-223ENST00000557076 SMIM4Q8WVI0 70 aa2.8□□□□□ -1.96
SCFD1-223ENST00000557076 FXYD5Q96DB9 178 aa2.8□□□□□ -1.96
SCFD1-223ENST00000557076 TVP23CQ96ET8 276 aa2.8□□□□□ -1.96
SCFD1-223ENST00000557076 SLC25A2Q9BXI2 301 aa2.8□□□□□ -1.96
SCFD1-223ENST00000557076 SLIRPQ9GZT3 109 aaKnown RBP2.8□□□□□ -1.96
SCFD1-223ENST00000557076 TREM1Q9NP99 234 aa2.8□□□□□ -1.96
SCFD1-223ENST00000557076 RAB26Q9ULW5 256 aa2.8□□□□□ -1.96
SCFD1-223ENST00000557076 A0A096LNI7 61 aa2.79□□□□□ -1.96
SCFD1-223ENST00000557076 C7orf66A4D0T2 115 aa2.79□□□□□ -1.96
SCFD1-223ENST00000557076 FAM24AA6NFZ4 105 aa2.79□□□□□ -1.96
SCFD1-223ENST00000557076 S100A9P06702 114 aaKnown RBP2.79□□□□□ -1.96
SCFD1-223ENST00000557076 RPL13AP40429 203 aaKnown RBP2.79□□□□□ -1.96
SCFD1-223ENST00000557076 S100A10P60903 97 aa2.79□□□□□ -1.96
SCFD1-223ENST00000557076 RBX1P62877 108 aa2.79□□□□□ -1.96
SCFD1-223ENST00000557076 REG3AQ06141 175 aa2.79□□□□□ -1.96
SCFD1-223ENST00000557076 NEDD8Q15843 81 aa2.79□□□□□ -1.96
SCFD1-223ENST00000557076 LGALSLQ3ZCW2 172 aaPredicted RBP2.79□□□□□ -1.96
SCFD1-223ENST00000557076 MITD1Q8WV92 249 aa2.79□□□□□ -1.96
SCFD1-223ENST00000557076 AP3S1Q92572 193 aa2.79□□□□□ -1.96
SCFD1-223ENST00000557076 CHCHD5Q9BSY4 110 aa2.79□□□□□ -1.96
SCFD1-223ENST00000557076 NMES1Q9C002 83 aa2.79□□□□□ -1.96
SCFD1-223ENST00000557076 MIXL1Q9H2W2 232 aa2.79□□□□□ -1.96
SCFD1-223ENST00000557076 VCX3BQ9H321 246 aa2.79□□□□□ -1.96
SCFD1-223ENST00000557076 JPT2Q9H910 190 aa2.79□□□□□ -1.96
SCFD1-223ENST00000557076 MCUBQ9NWR8 336 aa2.79□□□□□ -1.96
SCFD1-223ENST00000557076 MT-ND6P03923 174 aa2.78□□□□□ -1.96
SCFD1-223ENST00000557076 KRTAP1-4P0C5Y4 121 aa2.78□□□□□ -1.96
SCFD1-223ENST00000557076 S100A11P31949 105 aa2.78□□□□□ -1.96
SCFD1-223ENST00000557076 PPP1R1AQ13522 171 aa2.78□□□□□ -1.96
SCFD1-223ENST00000557076 TMEM97Q5BJF2 176 aa2.78□□□□□ -1.96
SCFD1-223ENST00000557076 PHYHIPLQ96FC7 376 aa2.78□□□□□ -1.96
SCFD1-223ENST00000557076 DIRAS2Q96HU8 199 aa2.78□□□□□ -1.96
SCFD1-223ENST00000557076 SLC25A21Q9BQT8 299 aaPredicted RBP2.78□□□□□ -1.96
SCFD1-223ENST00000557076 LYRM2Q9NU23 88 aaPredicted RBP2.78□□□□□ -1.96
SCFD1-223ENST00000557076 UQCC1Q9NVA1 299 aa2.78□□□□□ -1.96
SCFD1-223ENST00000557076 IL36BQ9NZH7 164 aa2.78□□□□□ -1.96
SCFD1-223ENST00000557076 OR5AC2Q9NZP5 309 aa2.78□□□□□ -1.96
SCFD1-223ENST00000557076 PKIGQ9Y2B9 76 aa2.78□□□□□ -1.96
SCFD1-223ENST00000557076 CARHSP1Q9Y2V2 147 aaKnown RBP2.78□□□□□ -1.96
SCFD1-223ENST00000557076 MUC17Q685J3 4493 aa2.78□□□□□ -1.97
SCFD1-223ENST00000557076 H0Y9J4 135 aa2.77□□□□□ -1.97
SCFD1-223ENST00000557076 PTTG1O95997 202 aa2.77□□□□□ -1.97
SCFD1-223ENST00000557076 IGLV7-43P04211 117 aa2.77□□□□□ -1.97
SCFD1-223ENST00000557076 S100A4P26447 101 aaKnown RBP2.77□□□□□ -1.97
SCFD1-223ENST00000557076 ZNF80P51504 273 aaPredicted RBP2.77□□□□□ -1.97
SCFD1-223ENST00000557076 NCS1P62166 190 aa2.77□□□□□ -1.97
SCFD1-223ENST00000557076 SPCS2Q15005 226 aa2.77□□□□□ -1.97
SCFD1-223ENST00000557076 GCSAMLQ5JQS6 135 aa2.77□□□□□ -1.97
SCFD1-223ENST00000557076 C1orf137Q5JT78 98 aa2.77□□□□□ -1.97
SCFD1-223ENST00000557076 SPANXN2Q5MJ10 180 aa2.77□□□□□ -1.97
SCFD1-223ENST00000557076 NTM-AS1Q6ZSK4 140 aa2.77□□□□□ -1.97
SCFD1-223ENST00000557076 MIR17HGQ75NE6 70 aa2.77□□□□□ -1.97
SCFD1-223ENST00000557076 SLC7A5P1Q8MH63 180 aa2.77□□□□□ -1.97
SCFD1-223ENST00000557076 C15orf56Q8N910 161 aa2.77□□□□□ -1.97
SCFD1-223ENST00000557076 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.77□□□□□ -1.97
SCFD1-223ENST00000557076 CMTM2Q8TAZ6 248 aa2.77□□□□□ -1.97
SCFD1-223ENST00000557076 SFRP2Q96HF1 295 aa2.77□□□□□ -1.97
SCFD1-223ENST00000557076 PRAC1Q96KF2 57 aa2.77□□□□□ -1.97
SCFD1-223ENST00000557076 HYLS1Q96M11 299 aa2.77□□□□□ -1.97
SCFD1-223ENST00000557076 BCL7BQ9BQE9 202 aa2.77□□□□□ -1.97
SCFD1-223ENST00000557076 ALKBH7Q9BT30 221 aaPredicted RBP2.77□□□□□ -1.97
SCFD1-223ENST00000557076 OTORQ9NRC9 128 aa2.77□□□□□ -1.97
SCFD1-223ENST00000557076 C9orf170A2RU37 121 aa2.76□□□□□ -1.97
SCFD1-223ENST00000557076 SMIM1B2RUZ4 78 aa2.76□□□□□ -1.97
SCFD1-223ENST00000557076 F6UZH7 168 aa2.76□□□□□ -1.97
SCFD1-223ENST00000557076 CST7O76096 145 aa2.76□□□□□ -1.97
SCFD1-223ENST00000557076 TSPAN13O95857 204 aa2.76□□□□□ -1.97
SCFD1-223ENST00000557076 GCGP01275 180 aa2.76□□□□□ -1.97
SCFD1-223ENST00000557076 CRYGAP11844 174 aa2.76□□□□□ -1.97
SCFD1-223ENST00000557076 RAB5CP51148 216 aa2.76□□□□□ -1.97
SCFD1-223ENST00000557076 UBE2D1P51668 147 aa2.76□□□□□ -1.97
SCFD1-223ENST00000557076 RAB2AP61019 212 aa2.76□□□□□ -1.97
SCFD1-223ENST00000557076 VBP1P61758 197 aa2.76□□□□□ -1.97
SCFD1-223ENST00000557076 ATP6V1FQ16864 119 aa2.76□□□□□ -1.97
SCFD1-223ENST00000557076 TPRXLQ17RH7 258 aa2.76□□□□□ -1.97
SCFD1-223ENST00000557076 IAH1Q2TAA2 248 aaPredicted RBP2.76□□□□□ -1.97
SCFD1-223ENST00000557076 FAM74A1Q5RGS3 127 aa2.76□□□□□ -1.97
SCFD1-223ENST00000557076 DNLZQ5SXM8 178 aa2.76□□□□□ -1.97
SCFD1-223ENST00000557076 CLPSL2Q6UWE3 100 aa2.76□□□□□ -1.97
SCFD1-223ENST00000557076 GOLT1AQ6ZVE7 132 aa2.76□□□□□ -1.97
SCFD1-223ENST00000557076 C20orf203Q8NBC4 194 aa2.76□□□□□ -1.97
SCFD1-223ENST00000557076 GSKIPQ9P0R6 139 aa2.76□□□□□ -1.97
SCFD1-223ENST00000557076 TRBV25-1A0A075B6N4 114 aa2.75□□□□□ -1.97
SCFD1-223ENST00000557076 GVQW2A0A096LPI5 108 aaPredicted RBP2.75□□□□□ -1.97
SCFD1-223ENST00000557076 TRBV6-1A0A0K0K1D8 114 aa2.75□□□□□ -1.97
SCFD1-223ENST00000557076 SERTM2A0A1B0GWG4 89 aa2.75□□□□□ -1.97
SCFD1-223ENST00000557076 A0A1W2PNN7 141 aa2.75□□□□□ -1.97
SCFD1-223ENST00000557076 OR7C2O60412 319 aa2.75□□□□□ -1.97
SCFD1-223ENST00000557076 FGF7P21781 194 aa2.75□□□□□ -1.97
SCFD1-223ENST00000557076 FAUP35544 74 aaKnown RBP2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms