RNA–Protein interactions for RNA: ENST00000557005.1

SYNE2-223, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 5,804 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-223ENST00000557005 LECT2O14960 151 aa3.72□□□□□ -1.81
SYNE2-223ENST00000557005 Q8NA96 180 aa3.72□□□□□ -1.81
SYNE2-223ENST00000557005 M0QY20 66 aa3.72□□□□□ -1.81
SYNE2-223ENST00000557005 ATP5G1P05496 136 aa3.72□□□□□ -1.81
SYNE2-223ENST00000557005 ZFAND2AQ8N6M9 145 aa3.72□□□□□ -1.81
SYNE2-223ENST00000557005 DEFB105AQ8NG35 78 aa3.72□□□□□ -1.81
SYNE2-223ENST00000557005 CDIP1Q9H305 208 aa3.72□□□□□ -1.81
SYNE2-223ENST00000557005 ZNF580Q9UK33 172 aa3.72□□□□□ -1.81
SYNE2-223ENST00000557005 GPHB5Q86YW7 130 aa3.72□□□□□ -1.81
SYNE2-223ENST00000557005 Q96MF0 132 aa3.72□□□□□ -1.81
SYNE2-223ENST00000557005 SDK2Q58EX2 2172 aa3.72□□□□□ -1.81
SYNE2-223ENST00000557005 TNFRSF13BO14836 293 aaPredicted RBP3.71□□□□□ -1.81
SYNE2-223ENST00000557005 RPL32P62910 135 aaKnown RBP3.71□□□□□ -1.81
SYNE2-223ENST00000557005 MIR7-3HGQ8N6C7 128 aa3.71□□□□□ -1.81
SYNE2-223ENST00000557005 A0A0J9YX75 114 aa3.71□□□□□ -1.82
SYNE2-223ENST00000557005 COX7A2LO14548 114 aa3.71□□□□□ -1.82
SYNE2-223ENST00000557005 PIK3CD-AS1Q5SR53 167 aa3.71□□□□□ -1.82
SYNE2-223ENST00000557005 PSMG3-AS1Q96PY0 264 aa3.71□□□□□ -1.82
SYNE2-223ENST00000557005 A6NDX4 124 aa3.71□□□□□ -1.82
SYNE2-223ENST00000557005 C10orf99Q6UWK7 81 aa3.71□□□□□ -1.82
SYNE2-223ENST00000557005 USP34Q70CQ2 3546 aa3.71□□□□□ -1.82
SYNE2-223ENST00000557005 IGLV10-54A0A075B6I4 117 aa3.71□□□□□ -1.82
SYNE2-223ENST00000557005 TRAV23DV6A0A075B6W5 121 aa3.71□□□□□ -1.82
SYNE2-223ENST00000557005 PRB2P02812 416 aaPredicted RBP3.71□□□□□ -1.82
SYNE2-223ENST00000557005 NBL1P41271 181 aa3.71□□□□□ -1.82
SYNE2-223ENST00000557005 IGF2-ASQ6U949 168 aa3.71□□□□□ -1.82
SYNE2-223ENST00000557005 MED12LQ86YW9 2145 aa3.71□□□□□ -1.82
SYNE2-223ENST00000557005 RNF152Q8N8N0 203 aa3.71□□□□□ -1.82
SYNE2-223ENST00000557005 LINC00308Q8TCZ7 52 aa3.71□□□□□ -1.82
SYNE2-223ENST00000557005 TANC2Q9HCD6 1990 aa3.71□□□□□ -1.82
SYNE2-223ENST00000557005 F8W735 103 aaPredicted RBP3.7□□□□□ -1.82
SYNE2-223ENST00000557005 GATA3P23771 443 aa3.7□□□□□ -1.82
SYNE2-223ENST00000557005 PSMB8P28062 276 aa3.7□□□□□ -1.82
SYNE2-223ENST00000557005 Q8N6K4 173 aa3.7□□□□□ -1.82
SYNE2-223ENST00000557005 NDUFA1O15239 70 aa3.7□□□□□ -1.82
SYNE2-223ENST00000557005 NDUFA7O95182 113 aa3.7□□□□□ -1.82
SYNE2-223ENST00000557005 C10orf105Q8TEF2 133 aa3.7□□□□□ -1.82
SYNE2-223ENST00000557005 UPK3BQ9BT76 320 aa3.7□□□□□ -1.82
SYNE2-223ENST00000557005 GHRHP01286 108 aa3.7□□□□□ -1.82
SYNE2-223ENST00000557005 MAP6D1Q9H9H5 199 aa3.7□□□□□ -1.82
SYNE2-223ENST00000557005 VPREB3Q9UKI3 123 aa3.7□□□□□ -1.82
SYNE2-223ENST00000557005 hADV29S1A0JD25 119 aa3.7□□□□□ -1.82
SYNE2-223ENST00000557005 WFDC11Q8NEX6 87 aa3.7□□□□□ -1.82
SYNE2-223ENST00000557005 C16orf74Q96GX8 76 aa3.7□□□□□ -1.82
SYNE2-223ENST00000557005 UBE2D4Q9Y2X8 147 aa3.7□□□□□ -1.82
SYNE2-223ENST00000557005 COX6A2Q02221 97 aa3.69□□□□□ -1.82
SYNE2-223ENST00000557005 ENHOQ6UWT2 76 aa3.69□□□□□ -1.82
SYNE2-223ENST00000557005 C18orf65Q6ZTR6 163 aa3.69□□□□□ -1.82
SYNE2-223ENST00000557005 C4orf3Q8WVX3 66 aa3.69□□□□□ -1.82
SYNE2-223ENST00000557005 IGIPA6NJ69 53 aa3.69□□□□□ -1.82
SYNE2-223ENST00000557005 M0QXV9 152 aa3.69□□□□□ -1.82
SYNE2-223ENST00000557005 ANGP03950 147 aaKnown RBP3.69□□□□□ -1.82
SYNE2-223ENST00000557005 SMCPP49901 116 aaPredicted RBP3.69□□□□□ -1.82
SYNE2-223ENST00000557005 UBE2D3P61077 147 aa3.69□□□□□ -1.82
SYNE2-223ENST00000557005 UBE2D2P62837 147 aa3.69□□□□□ -1.82
SYNE2-223ENST00000557005 LINC00643Q86TS7 51 aa3.69□□□□□ -1.82
SYNE2-223ENST00000557005 CNFNQ9BYD5 112 aa3.69□□□□□ -1.82
SYNE2-223ENST00000557005 ALPK2Q86TB3 2170 aa3.69□□□□□ -1.82
SYNE2-223ENST00000557005 F5H768 121 aa3.69□□□□□ -1.82
SYNE2-223ENST00000557005 CMC4P56277 68 aaPredicted RBP3.69□□□□□ -1.82
SYNE2-223ENST00000557005 RBM3P98179 157 aaKnown RBP3.69□□□□□ -1.82
SYNE2-223ENST00000557005 ADAMTSL4-AS1Q5T5F5 129 aa3.69□□□□□ -1.82
SYNE2-223ENST00000557005 DPH3Q96FX2 82 aa3.69□□□□□ -1.82
SYNE2-223ENST00000557005 IGHV4-28A0A0C4DH34 117 aa3.69□□□□□ -1.82
SYNE2-223ENST00000557005 C19orf84I3L1E1 186 aa3.69□□□□□ -1.82
SYNE2-223ENST00000557005 C5orf47Q569G3 176 aa3.69□□□□□ -1.82
SYNE2-223ENST00000557005 CDKN2A-AS1Q9UH64 79 aa3.69□□□□□ -1.82
SYNE2-223ENST00000557005 K7EMT4 169 aa3.69□□□□□ -1.82
SYNE2-223ENST00000557005 UQCRQO14949 82 aa3.69□□□□□ -1.82
SYNE2-223ENST00000557005 CRYGDP07320 174 aa3.69□□□□□ -1.82
SYNE2-223ENST00000557005 GYPEP15421 78 aa3.69□□□□□ -1.82
SYNE2-223ENST00000557005 CXCL5P42830 114 aa3.69□□□□□ -1.82
SYNE2-223ENST00000557005 ESM1Q9NQ30 184 aa3.69□□□□□ -1.82
SYNE2-223ENST00000557005 C11orf71Q6IPW1 123 aa3.68□□□□□ -1.82
SYNE2-223ENST00000557005 LST1O00453 97 aa3.68□□□□□ -1.82
SYNE2-223ENST00000557005 ELANEP08246 267 aa3.68□□□□□ -1.82
SYNE2-223ENST00000557005 DAD1P61803 113 aa3.68□□□□□ -1.82
SYNE2-223ENST00000557005 CITED2Q99967 270 aaPredicted RBP3.68□□□□□ -1.82
SYNE2-223ENST00000557005 TET2Q6N021 2002 aaPredicted RBP3.68□□□□□ -1.82
SYNE2-223ENST00000557005 TIRAPP58753 221 aa3.68□□□□□ -1.82
SYNE2-223ENST00000557005 HIST2H2BCQ6DN03 193 aa3.68□□□□□ -1.82
SYNE2-223ENST00000557005 A0A087WYN8 130 aa3.68□□□□□ -1.82
SYNE2-223ENST00000557005 ZNF561-AS1K7EIQ3 104 aa3.68□□□□□ -1.82
SYNE2-223ENST00000557005 UBE2D1P51668 147 aa3.68□□□□□ -1.82
SYNE2-223ENST00000557005 SCXQ7RTU7 201 aa3.68□□□□□ -1.82
SYNE2-223ENST00000557005 C9orf85Q96MD7 179 aa3.68□□□□□ -1.82
SYNE2-223ENST00000557005 SDK1Q7Z5N4 2213 aa3.68□□□□□ -1.82
SYNE2-223ENST00000557005 H0YGX0 51 aa3.68□□□□□ -1.82
SYNE2-223ENST00000557005 TRBV27A0A0K0K1C4 114 aa3.67□□□□□ -1.82
SYNE2-223ENST00000557005 CCL24O00175 119 aa3.67□□□□□ -1.82
SYNE2-223ENST00000557005 POM121L12Q8N7R1 296 aa3.67□□□□□ -1.82
SYNE2-223ENST00000557005 ODF3Q96PU9 254 aa3.67□□□□□ -1.82
SYNE2-223ENST00000557005 ASCC3Q8N3C0 2202 aaKnown RBP3.67□□□□□ -1.82
SYNE2-223ENST00000557005 MYO7BQ6PIF6 2116 aa3.67□□□□□ -1.82
SYNE2-223ENST00000557005 LOC100131303A0A0U1RQF7 123 aa3.67□□□□□ -1.82
SYNE2-223ENST00000557005 J3QLI3 93 aa3.67□□□□□ -1.82
SYNE2-223ENST00000557005 EBI3Q14213 229 aa3.67□□□□□ -1.82
SYNE2-223ENST00000557005 Q6ZTI0 123 aa3.67□□□□□ -1.82
SYNE2-223ENST00000557005 DEFB4AO15263 64 aa3.67□□□□□ -1.82
SYNE2-223ENST00000557005 CDSNQ15517 529 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 142.8 ms