RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 M0QY20 66 aa7.24□□□□□ -1.25
LINC00239-201ENST00000556973 ADIRFQ15847 76 aa7.24□□□□□ -1.25
LINC00239-201ENST00000556973 CLLU1Q5K131 121 aa7.24□□□□□ -1.25
LINC00239-201ENST00000556973 SMIM15Q7Z3B0 74 aa7.24□□□□□ -1.25
LINC00239-201ENST00000556973 BORCS7Q96B45 105 aa7.24□□□□□ -1.25
LINC00239-201ENST00000556973 PGLYRP4Q96LB8 373 aa7.24□□□□□ -1.25
LINC00239-201ENST00000556973 TNFRSF18Q9Y5U5 241 aa7.24□□□□□ -1.25
LINC00239-201ENST00000556973 DNAH10Q8IVF4 4471 aa7.23□□□□□ -1.25
LINC00239-201ENST00000556973 IBA57-AS1B1ANH7 110 aa7.23□□□□□ -1.25
LINC00239-201ENST00000556973 TNP2Q05952 138 aa7.23□□□□□ -1.25
LINC00239-201ENST00000556973 TMEM97Q5BJF2 176 aa7.23□□□□□ -1.25
LINC00239-201ENST00000556973 SUMO4Q6EEV6 95 aa7.23□□□□□ -1.25
LINC00239-201ENST00000556973 DAZ4Q86SG3 579 aaKnown RBP7.23□□□□□ -1.25
LINC00239-201ENST00000556973 DAZ3Q9NR90 486 aaKnown RBP7.23□□□□□ -1.25
LINC00239-201ENST00000556973 V9GYV3 84 aa7.23□□□□□ -1.25
LINC00239-201ENST00000556973 HIGD1CA8MV81 97 aa7.22□□□□□ -1.25
LINC00239-201ENST00000556973 IGHV3-30P01768 117 aa7.22□□□□□ -1.25
LINC00239-201ENST00000556973 IGHV3-33P01772 117 aa7.22□□□□□ -1.25
LINC00239-201ENST00000556973 IGHV3-30-3P0DP02 117 aa7.22□□□□□ -1.25
LINC00239-201ENST00000556973 IGHV3-30-5P0DP03 117 aa7.22□□□□□ -1.25
LINC00239-201ENST00000556973 RASL11AQ6T310 242 aa7.22□□□□□ -1.25
LINC00239-201ENST00000556973 Q6ZRN7 208 aaPredicted RBP7.22□□□□□ -1.25
LINC00239-201ENST00000556973 NIT2Q9NQR4 276 aa7.22□□□□□ -1.25
LINC00239-201ENST00000556973 URGCP-MRPS24S4R325 110 aa7.22□□□□□ -1.25
LINC00239-201ENST00000556973 TRBV6-8A0A0A6YYG3 113 aa7.21□□□□□ -1.26
LINC00239-201ENST00000556973 A0A1B0GUT8 65 aa7.21□□□□□ -1.26
LINC00239-201ENST00000556973 IFITM2Q01629 132 aa7.21□□□□□ -1.26
LINC00239-201ENST00000556973 FRZBQ92765 325 aa7.21□□□□□ -1.26
LINC00239-201ENST00000556973 NAT8BQ9UHF3 227 aa7.21□□□□□ -1.26
LINC00239-201ENST00000556973 FAT2Q9NYQ8 4349 aa7.21□□□□□ -1.26
LINC00239-201ENST00000556973 NIT1Q86X76 327 aa7.2□□□□□ -1.26
LINC00239-201ENST00000556973 CHCHD7Q9BUK0 85 aa7.2□□□□□ -1.26
LINC00239-201ENST00000556973 A0A087WX48 190 aa7.19□□□□□ -1.26
LINC00239-201ENST00000556973 SMIM27A0A1W2PRY6 76 aa7.19□□□□□ -1.26
LINC00239-201ENST00000556973 TMEM262E9PQX1 116 aa7.19□□□□□ -1.26
LINC00239-201ENST00000556973 RIGQ13278 110 aa7.19□□□□□ -1.26
LINC00239-201ENST00000556973 LAGE3Q14657 143 aa7.19□□□□□ -1.26
LINC00239-201ENST00000556973 KCNIP4Q6PIL6 250 aa7.19□□□□□ -1.26
LINC00239-201ENST00000556973 GATD1Q8NB37 220 aa7.19□□□□□ -1.26
LINC00239-201ENST00000556973 NUP35Q8NFH5 326 aa7.19□□□□□ -1.26
LINC00239-201ENST00000556973 TRBV25-1A0A075B6N4 114 aa7.18□□□□□ -1.26
LINC00239-201ENST00000556973 TRAV8-3A0A0A6YYJ7 113 aa7.18□□□□□ -1.26
LINC00239-201ENST00000556973 EREGO14944 169 aa7.18□□□□□ -1.26
LINC00239-201ENST00000556973 PKIAP61925 76 aa7.18□□□□□ -1.26
LINC00239-201ENST00000556973 PNRC1Q12796 327 aaPredicted RBP7.18□□□□□ -1.26
LINC00239-201ENST00000556973 ELOBQ15370 118 aa7.18□□□□□ -1.26
LINC00239-201ENST00000556973 UQCC3Q6UW78 93 aa7.18□□□□□ -1.26
LINC00239-201ENST00000556973 NTM-AS1Q6ZSK4 140 aa7.18□□□□□ -1.26
LINC00239-201ENST00000556973 TMEM191AQ9H0A3 160 aa7.18□□□□□ -1.26
LINC00239-201ENST00000556973 DNAH17Q9UFH2 4485 aa7.18□□□□□ -1.26
LINC00239-201ENST00000556973 PKD1P98161 4303 aa7.18□□□□□ -1.26
LINC00239-201ENST00000556973 TRAV26-2A0A0B4J265 109 aa7.17□□□□□ -1.26
LINC00239-201ENST00000556973 PPP1R2P9O14990 202 aa7.17□□□□□ -1.26
LINC00239-201ENST00000556973 PSCAO43653 123 aa7.17□□□□□ -1.26
LINC00239-201ENST00000556973 IQCJQ1A5X6 159 aa7.17□□□□□ -1.26
LINC00239-201ENST00000556973 Q8N3U1 123 aa7.17□□□□□ -1.26
LINC00239-201ENST00000556973 CHCHD5Q9BSY4 110 aa7.17□□□□□ -1.26
LINC00239-201ENST00000556973 TM2D2Q9BX73 214 aa7.17□□□□□ -1.26
LINC00239-201ENST00000556973 Q9HAA7 133 aa7.17□□□□□ -1.26
LINC00239-201ENST00000556973 IGHV1-24A0A0C4DH33 117 aa7.16□□□□□ -1.26
LINC00239-201ENST00000556973 A0A1B0GW15 77 aa7.16□□□□□ -1.26
LINC00239-201ENST00000556973 RAB4AP20338 218 aa7.16□□□□□ -1.26
LINC00239-201ENST00000556973 KLK12Q9UKR0 248 aa7.16□□□□□ -1.26
LINC00239-201ENST00000556973 HECTD4Q9Y4D8 3996 aa7.15□□□□□ -1.26
LINC00239-201ENST00000556973 A0A087WTM6 91 aa7.15□□□□□ -1.26
LINC00239-201ENST00000556973 MT-ND4LP03901 98 aa7.15□□□□□ -1.26
LINC00239-201ENST00000556973 COTL1Q14019 142 aa7.15□□□□□ -1.26
LINC00239-201ENST00000556973 SPATA12Q7Z6I5 190 aa7.15□□□□□ -1.26
LINC00239-201ENST00000556973 ANAPC16Q96DE5 110 aa7.15□□□□□ -1.26
LINC00239-201ENST00000556973 RPL39LQ96EH5 51 aaKnown RBP7.15□□□□□ -1.26
LINC00239-201ENST00000556973 MRAP2Q96G30 205 aa7.15□□□□□ -1.26
LINC00239-201ENST00000556973 RNF185Q96GF1 192 aa7.15□□□□□ -1.26
LINC00239-201ENST00000556973 PGPEP1Q9NXJ5 209 aa7.15□□□□□ -1.26
LINC00239-201ENST00000556973 COX11Q9Y6N1 276 aa7.15□□□□□ -1.26
LINC00239-201ENST00000556973 TRBV6-5A0A0K0K1A5 114 aa7.14□□□□□ -1.27
LINC00239-201ENST00000556973 TMEM218A2RU14 115 aa7.14□□□□□ -1.27
LINC00239-201ENST00000556973 NCR2O95944 276 aa7.14□□□□□ -1.27
LINC00239-201ENST00000556973 S100A8P05109 93 aa7.14□□□□□ -1.27
LINC00239-201ENST00000556973 Q0VG73 95 aa7.14□□□□□ -1.27
LINC00239-201ENST00000556973 ATRAIDQ6UW56 229 aa7.14□□□□□ -1.27
LINC00239-201ENST00000556973 AMN1Q8IY45 258 aa7.14□□□□□ -1.27
LINC00239-201ENST00000556973 RMI2Q96E14 147 aa7.14□□□□□ -1.27
LINC00239-201ENST00000556973 A0A1B0GUV1 79 aa7.13□□□□□ -1.27
LINC00239-201ENST00000556973 LRCOL1A6NCL2 159 aa7.13□□□□□ -1.27
LINC00239-201ENST00000556973 SDHAF1A6NFY7 115 aa7.13□□□□□ -1.27
LINC00239-201ENST00000556973 C16orf90A8MZG2 172 aa7.13□□□□□ -1.27
LINC00239-201ENST00000556973 I3L3M4 83 aa7.13□□□□□ -1.27
LINC00239-201ENST00000556973 PPP1R17O96001 155 aa7.13□□□□□ -1.27
LINC00239-201ENST00000556973 ANGP03950 147 aaKnown RBP7.13□□□□□ -1.27
LINC00239-201ENST00000556973 PMCHP20382 165 aa7.13□□□□□ -1.27
LINC00239-201ENST00000556973 AMTP48728 403 aa7.13□□□□□ -1.27
LINC00239-201ENST00000556973 CAMPP49913 170 aa7.13□□□□□ -1.27
LINC00239-201ENST00000556973 GAGE6Q13070 117 aa7.13□□□□□ -1.27
LINC00239-201ENST00000556973 MPV17L2Q567V2 206 aa7.13□□□□□ -1.27
LINC00239-201ENST00000556973 Q8N976 141 aa7.13□□□□□ -1.27
LINC00239-201ENST00000556973 UBE2WQ96B02 151 aa7.13□□□□□ -1.27
LINC00239-201ENST00000556973 TMEM243Q9BU79 118 aa7.13□□□□□ -1.27
LINC00239-201ENST00000556973 ST20Q9HBF5 79 aa7.13□□□□□ -1.27
LINC00239-201ENST00000556973 F8W036 122 aa7.12□□□□□ -1.27
LINC00239-201ENST00000556973 UBE2L6O14933 153 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms