RNA–Protein interactions for RNA: ENST00000556956.1

SLIRP-208, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 450 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-208ENST00000556956 COPS9Q8WXC6 57 aa2.13□□□□□ -2.07
SLIRP-208ENST00000556956 NRGNQ92686 78 aa2.13□□□□□ -2.07
SLIRP-208ENST00000556956 DNAJC30Q96LL9 226 aa2.13□□□□□ -2.07
SLIRP-208ENST00000556956 AMELXQ99217 191 aa2.13□□□□□ -2.07
SLIRP-208ENST00000556956 LINC01587Q99440 93 aa2.13□□□□□ -2.07
SLIRP-208ENST00000556956 BEX4Q9NWD9 120 aaPredicted RBP2.13□□□□□ -2.07
SLIRP-208ENST00000556956 VPREB3Q9UKI3 123 aa2.13□□□□□ -2.07
SLIRP-208ENST00000556956 ICOSQ9Y6W8 199 aa2.13□□□□□ -2.07
SLIRP-208ENST00000556956 USP34Q70CQ2 3546 aa2.12□□□□□ -2.07
SLIRP-208ENST00000556956 MED12Q93074 2177 aa2.12□□□□□ -2.07
SLIRP-208ENST00000556956 ASXL3Q9C0F0 2248 aa2.12□□□□□ -2.07
SLIRP-208ENST00000556956 IGHV3OR16-8A0A075B7F1 116 aa2.12□□□□□ -2.07
SLIRP-208ENST00000556956 IGHV3-35A0A0C4DH35 117 aa2.12□□□□□ -2.07
SLIRP-208ENST00000556956 TEX49A0A1B0GTD5 131 aa2.12□□□□□ -2.07
SLIRP-208ENST00000556956 A0A1B0GX51 115 aa2.12□□□□□ -2.07
SLIRP-208ENST00000556956 I3L3M4 83 aa2.12□□□□□ -2.07
SLIRP-208ENST00000556956 J3KRW8 73 aa2.12□□□□□ -2.07
SLIRP-208ENST00000556956 LST1O00453 97 aa2.12□□□□□ -2.07
SLIRP-208ENST00000556956 NDUFA4O00483 81 aa2.12□□□□□ -2.07
SLIRP-208ENST00000556956 UQCRQO14949 82 aa2.12□□□□□ -2.07
SLIRP-208ENST00000556956 GNRH2O43555 120 aa2.12□□□□□ -2.07
SLIRP-208ENST00000556956 RNASE3P12724 160 aaKnown RBP2.12□□□□□ -2.07
SLIRP-208ENST00000556956 ZNF22P17026 224 aaPredicted RBP2.12□□□□□ -2.07
SLIRP-208ENST00000556956 CXCL5P42830 114 aa2.12□□□□□ -2.07
SLIRP-208ENST00000556956 UBE2E1P51965 193 aa2.12□□□□□ -2.07
SLIRP-208ENST00000556956 TSPEAR-AS2P59090 65 aa2.12□□□□□ -2.07
SLIRP-208ENST00000556956 RPS28P62857 69 aaKnown RBP2.12□□□□□ -2.07
SLIRP-208ENST00000556956 NDPQ00604 133 aa2.12□□□□□ -2.07
SLIRP-208ENST00000556956 PRB3Q04118 309 aaPredicted RBP2.12□□□□□ -2.07
SLIRP-208ENST00000556956 CIRBPQ14011 172 aaKnown RBP2.12□□□□□ -2.07
SLIRP-208ENST00000556956 MIAQ16674 131 aa2.12□□□□□ -2.07
SLIRP-208ENST00000556956 ECSCRQ19T08 205 aa2.12□□□□□ -2.07
SLIRP-208ENST00000556956 NSUN5P1Q3KNT7 163 aa2.12□□□□□ -2.07
SLIRP-208ENST00000556956 C5orf47Q569G3 176 aa2.12□□□□□ -2.07
SLIRP-208ENST00000556956 PRR9Q5T870 116 aa2.12□□□□□ -2.07
SLIRP-208ENST00000556956 C9orf153Q5TBE3 101 aa2.12□□□□□ -2.07
SLIRP-208ENST00000556956 Q6ZQT7 251 aa2.12□□□□□ -2.07
SLIRP-208ENST00000556956 VMO1Q7Z5L0 202 aa2.12□□□□□ -2.07
SLIRP-208ENST00000556956 ZNRF2Q8NHG8 242 aa2.12□□□□□ -2.07
SLIRP-208ENST00000556956 FAM19A4Q96LR4 140 aa2.12□□□□□ -2.07
SLIRP-208ENST00000556956 DUX3Q96PT4 197 aa2.12□□□□□ -2.07
SLIRP-208ENST00000556956 CHCHD5Q9BSY4 110 aa2.12□□□□□ -2.07
SLIRP-208ENST00000556956 PYGO1Q9Y3Y4 419 aa2.12□□□□□ -2.07
SLIRP-208ENST00000556956 KIF25-AS1Q9Y6Z4 181 aa2.12□□□□□ -2.07
SLIRP-208ENST00000556956 ZNF318Q5VUA4 2279 aa2.12□□□□□ -2.07
SLIRP-208ENST00000556956 SEC16AO15027 2179 aa2.12□□□□□ -2.07
SLIRP-208ENST00000556956 RTTNQ86VV8 2226 aa2.11□□□□□ -2.07
SLIRP-208ENST00000556956 ASCC3Q8N3C0 2202 aaKnown RBP2.11□□□□□ -2.07
SLIRP-208ENST00000556956 SDK2Q58EX2 2172 aa2.11□□□□□ -2.07
SLIRP-208ENST00000556956 DOCK10Q96BY6 2186 aa2.11□□□□□ -2.07
SLIRP-208ENST00000556956 IGHV3OR16-13A0A075B7E8 117 aa2.11□□□□□ -2.07
SLIRP-208ENST00000556956 A0A0A0MQY5 61 aa2.11□□□□□ -2.07
SLIRP-208ENST00000556956 IGHV3-49A0A0A0MS15 119 aa2.11□□□□□ -2.07
SLIRP-208ENST00000556956 IGHV3-74A0A0B4J1X5 117 aa2.11□□□□□ -2.07
SLIRP-208ENST00000556956 IGHV1-58A0A0C4DH39 117 aa2.11□□□□□ -2.07
SLIRP-208ENST00000556956 TINCRA0A1B0GVN0 87 aa2.11□□□□□ -2.07
SLIRP-208ENST00000556956 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP2.11□□□□□ -2.07
SLIRP-208ENST00000556956 LYNX1G3V0Z9 82 aa2.11□□□□□ -2.07
SLIRP-208ENST00000556956 J3KT08 172 aa2.11□□□□□ -2.07
SLIRP-208ENST00000556956 ATP6V0E1O15342 81 aa2.11□□□□□ -2.07
SLIRP-208ENST00000556956 NDUFA7O95182 113 aa2.11□□□□□ -2.07
SLIRP-208ENST00000556956 TRACP01848 142 aa2.11□□□□□ -2.07
SLIRP-208ENST00000556956 IGF1P05019 195 aa2.11□□□□□ -2.07
SLIRP-208ENST00000556956 LINC00694P0DN24 101 aa2.11□□□□□ -2.07
SLIRP-208ENST00000556956 IGHV3-30-3P0DP02 117 aa2.11□□□□□ -2.07
SLIRP-208ENST00000556956 LYNX1P0DP58 116 aa2.11□□□□□ -2.07
SLIRP-208ENST00000556956 LINC00315P59091 139 aa2.11□□□□□ -2.07
SLIRP-208ENST00000556956 HILS1P60008 231 aa2.11□□□□□ -2.07
SLIRP-208ENST00000556956 RPL39P62891 51 aaKnown RBP2.11□□□□□ -2.07
SLIRP-208ENST00000556956 MRPS36P82909 103 aaKnown RBP2.11□□□□□ -2.07
SLIRP-208ENST00000556956 KRTAP5-5Q701N2 237 aaPredicted RBP2.11□□□□□ -2.07
SLIRP-208ENST00000556956 DEFB123Q8N688 67 aa2.11□□□□□ -2.07
SLIRP-208ENST00000556956 C20orf203Q8NBC4 194 aa2.11□□□□□ -2.07
SLIRP-208ENST00000556956 OR13C6PQ8NH95 151 aa2.11□□□□□ -2.07
SLIRP-208ENST00000556956 LINC00526Q96FQ7 95 aa2.11□□□□□ -2.07
SLIRP-208ENST00000556956 USMG5Q96IX5 58 aa2.11□□□□□ -2.07
SLIRP-208ENST00000556956 SPXQ9BT56 116 aa2.11□□□□□ -2.07
SLIRP-208ENST00000556956 TIMM21Q9BVV7 248 aa2.11□□□□□ -2.07
SLIRP-208ENST00000556956 PEMTQ9UBM1 199 aa2.11□□□□□ -2.07
SLIRP-208ENST00000556956 NDUFA12Q9UI09 145 aa2.11□□□□□ -2.07
SLIRP-208ENST00000556956 TET2Q6N021 2002 aaPredicted RBP2.11□□□□□ -2.07
SLIRP-208ENST00000556956 UNC80Q8N2C7 3258 aa2.11□□□□□ -2.07
SLIRP-208ENST00000556956 CABIN1Q9Y6J0 2220 aa2.1□□□□□ -2.07
SLIRP-208ENST00000556956 A0A0C4DFX4 3053 aa2.1□□□□□ -2.07
SLIRP-208ENST00000556956 TRIOO75962 3097 aa2.1□□□□□ -2.07
SLIRP-208ENST00000556956 DNAH14Q0VDD8 3507 aa2.1□□□□□ -2.07
SLIRP-208ENST00000556956 IGLV4-3A0A075B6K6 122 aa2.1□□□□□ -2.07
SLIRP-208ENST00000556956 IGHV3-64A0A075B6Q5 118 aa2.1□□□□□ -2.07
SLIRP-208ENST00000556956 TRAV8-3A0A0A6YYJ7 113 aa2.1□□□□□ -2.07
SLIRP-208ENST00000556956 TRAV41A0A0B4J266 112 aa2.1□□□□□ -2.07
SLIRP-208ENST00000556956 IGHV3-16A0A0C4DH30 117 aa2.1□□□□□ -2.07
SLIRP-208ENST00000556956 A0A0J9YXV3 536 aa2.1□□□□□ -2.07
SLIRP-208ENST00000556956 FAM236AA0A1B0GUQ0 79 aa2.1□□□□□ -2.07
SLIRP-208ENST00000556956 FAM236BA0A1B0GV22 79 aa2.1□□□□□ -2.07
SLIRP-208ENST00000556956 KLLNB2CW77 178 aa2.1□□□□□ -2.07
SLIRP-208ENST00000556956 H3BUA1 57 aa2.1□□□□□ -2.07
SLIRP-208ENST00000556956 K7EMT4 169 aa2.1□□□□□ -2.07
SLIRP-208ENST00000556956 M0QY20 66 aa2.1□□□□□ -2.07
SLIRP-208ENST00000556956 ATOX1O00244 68 aa2.1□□□□□ -2.07
SLIRP-208ENST00000556956 SOCS3O14543 225 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms