RNA–Protein interactions for RNA: ENST00000556622.1

CPSF2-205, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 5

Gene CPSF2, Length 469 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-205ENST00000556622 CRYBA4P53673 196 aa4.6□□□□□ -1.67
CPSF2-205ENST00000556622 DLX1P56177 255 aa4.6□□□□□ -1.67
CPSF2-205ENST00000556622 TCTAP57738 103 aa4.6□□□□□ -1.67
CPSF2-205ENST00000556622 CFHR3Q02985 330 aa4.6□□□□□ -1.67
CPSF2-205ENST00000556622 ERCC8Q13216 396 aa4.6□□□□□ -1.67
CPSF2-205ENST00000556622 PIK3CD-AS1Q5SR53 167 aa4.6□□□□□ -1.67
CPSF2-205ENST00000556622 MTURNQ8N3F0 131 aa4.6□□□□□ -1.67
CPSF2-205ENST00000556622 POM121L12Q8N7R1 296 aa4.6□□□□□ -1.67
CPSF2-205ENST00000556622 C18orf15Q96N68 181 aa4.6□□□□□ -1.67
CPSF2-205ENST00000556622 HIST1H4GQ99525 98 aa4.6□□□□□ -1.67
CPSF2-205ENST00000556622 IGLV2-18A0A075B6J9 118 aa4.59□□□□□ -1.67
CPSF2-205ENST00000556622 TRBV20-1A0A075B6N2 111 aa4.59□□□□□ -1.67
CPSF2-205ENST00000556622 TRBV25-1A0A075B6N4 114 aa4.59□□□□□ -1.67
CPSF2-205ENST00000556622 TRAV2A0A0B4J234 112 aa4.59□□□□□ -1.67
CPSF2-205ENST00000556622 TRAV8-2A0A0B4J237 113 aa4.59□□□□□ -1.67
CPSF2-205ENST00000556622 A6NDX4 124 aa4.59□□□□□ -1.67
CPSF2-205ENST00000556622 E9PLD3 99 aa4.59□□□□□ -1.67
CPSF2-205ENST00000556622 G3V318 75 aa4.59□□□□□ -1.67
CPSF2-205ENST00000556622 NXPH4O95158 308 aa4.59□□□□□ -1.67
CPSF2-205ENST00000556622 NCR2O95944 276 aa4.59□□□□□ -1.67
CPSF2-205ENST00000556622 SCGB1A1P11684 91 aa4.59□□□□□ -1.67
CPSF2-205ENST00000556622 RBX1P62877 108 aa4.59□□□□□ -1.67
CPSF2-205ENST00000556622 RHOHQ15669 191 aa4.59□□□□□ -1.67
CPSF2-205ENST00000556622 RNF182Q8N6D2 247 aa4.59□□□□□ -1.67
CPSF2-205ENST00000556622 NRACQ8N912 160 aa4.59□□□□□ -1.67
CPSF2-205ENST00000556622 ZNF418Q8TF45 676 aaPredicted RBP4.59□□□□□ -1.67
CPSF2-205ENST00000556622 COPS9Q8WXC6 57 aa4.59□□□□□ -1.67
CPSF2-205ENST00000556622 TIMM17AQ99595 171 aa4.59□□□□□ -1.67
CPSF2-205ENST00000556622 RHPN1-AS1Q9BWJ2 59 aa4.59□□□□□ -1.67
CPSF2-205ENST00000556622 KRTAP1-5Q9BYS1 174 aa4.59□□□□□ -1.67
CPSF2-205ENST00000556622 IGHV3OR16-10A0A075B7F0 116 aa4.58□□□□□ -1.68
CPSF2-205ENST00000556622 TRAV40A0A0B4J280 105 aa4.58□□□□□ -1.68
CPSF2-205ENST00000556622 TRBV6-5A0A0K0K1A5 114 aa4.58□□□□□ -1.68
CPSF2-205ENST00000556622 PRAC2D3DTV9 90 aa4.58□□□□□ -1.68
CPSF2-205ENST00000556622 G3V4G9 280 aa4.58□□□□□ -1.68
CPSF2-205ENST00000556622 SMKR1H3BMG3 65 aa4.58□□□□□ -1.68
CPSF2-205ENST00000556622 H3BVH4 76 aa4.58□□□□□ -1.68
CPSF2-205ENST00000556622 LGALS9O00182 355 aa4.58□□□□□ -1.68
CPSF2-205ENST00000556622 RNASE4P34096 147 aaKnown RBP4.58□□□□□ -1.68
CPSF2-205ENST00000556622 PRB3Q04118 309 aaPredicted RBP4.58□□□□□ -1.68
CPSF2-205ENST00000556622 SRSF9Q13242 221 aaKnown RBP eCLIP4.58□□□□□ -1.68
CPSF2-205ENST00000556622 PMVKQ15126 192 aa4.58□□□□□ -1.68
CPSF2-205ENST00000556622 UFSP1Q6NVU6 142 aa4.58□□□□□ -1.68
CPSF2-205ENST00000556622 C2orf66Q6UXQ4 117 aa4.58□□□□□ -1.68
CPSF2-205ENST00000556622 SCGB1D4Q6XE38 83 aa4.58□□□□□ -1.68
CPSF2-205ENST00000556622 FOXI2Q6ZQN5 318 aa4.58□□□□□ -1.68
CPSF2-205ENST00000556622 TRPT1Q86TN4 253 aaKnown RBP4.58□□□□□ -1.68
CPSF2-205ENST00000556622 FAM19A4Q96LR4 140 aa4.58□□□□□ -1.68
CPSF2-205ENST00000556622 MRPL35Q9NZE8 188 aaKnown RBP4.58□□□□□ -1.68
CPSF2-205ENST00000556622 MSRB1Q9NZV6 116 aa4.58□□□□□ -1.68
CPSF2-205ENST00000556622 ATRQ13535 2644 aa4.58□□□□□ -1.68
CPSF2-205ENST00000556622 TRAV8-6A0A0B4J262 113 aa4.57□□□□□ -1.68
CPSF2-205ENST00000556622 IGHV3-35A0A0C4DH35 117 aa4.57□□□□□ -1.68
CPSF2-205ENST00000556622 KLLNB2CW77 178 aa4.57□□□□□ -1.68
CPSF2-205ENST00000556622 H3BUX3 64 aa4.57□□□□□ -1.68
CPSF2-205ENST00000556622 SOCS3O14543 225 aa4.57□□□□□ -1.68
CPSF2-205ENST00000556622 MGPP08493 103 aa4.57□□□□□ -1.68
CPSF2-205ENST00000556622 HLA-DMBP28068 263 aa4.57□□□□□ -1.68
CPSF2-205ENST00000556622 CMC4P56277 68 aaPredicted RBP4.57□□□□□ -1.68
CPSF2-205ENST00000556622 GTSCR1Q86UQ5 136 aa4.57□□□□□ -1.68
CPSF2-205ENST00000556622 ZFAND2AQ8N6M9 145 aa4.57□□□□□ -1.68
CPSF2-205ENST00000556622 NEXN-AS1Q8NBZ9 246 aa4.57□□□□□ -1.68
CPSF2-205ENST00000556622 PTH2Q96A98 100 aa4.57□□□□□ -1.68
CPSF2-205ENST00000556622 ZNF479Q96JC4 524 aa4.57□□□□□ -1.68
CPSF2-205ENST00000556622 PEMTQ9UBM1 199 aa4.57□□□□□ -1.68
CPSF2-205ENST00000556622 COL6A5A8TX70 2615 aa4.57□□□□□ -1.68
CPSF2-205ENST00000556622 ANK3Q12955 4377 aaKnown RBP4.56□□□□□ -1.68
CPSF2-205ENST00000556622 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.56□□□□□ -1.68
CPSF2-205ENST00000556622 IGHV3-66A0A0C4DH42 116 aa4.56□□□□□ -1.68
CPSF2-205ENST00000556622 TRBV27A0A0K0K1C4 114 aa4.56□□□□□ -1.68
CPSF2-205ENST00000556622 A0A1B0GWB2 263 aa4.56□□□□□ -1.68
CPSF2-205ENST00000556622 C11orf86A6NJI1 115 aa4.56□□□□□ -1.68
CPSF2-205ENST00000556622 IGHV4-38-2P0DP08 117 aa4.56□□□□□ -1.68
CPSF2-205ENST00000556622 C12orf74Q32Q52 190 aa4.56□□□□□ -1.68
CPSF2-205ENST00000556622 KRTAP24-1Q3LI83 254 aa4.56□□□□□ -1.68
CPSF2-205ENST00000556622 ANXA2RQ3ZCQ2 193 aa4.56□□□□□ -1.68
CPSF2-205ENST00000556622 Q6ZVH6 145 aa4.56□□□□□ -1.68
CPSF2-205ENST00000556622 NEGR1Q7Z3B1 354 aa4.56□□□□□ -1.68
CPSF2-205ENST00000556622 PCP2Q8IVA1 136 aa4.56□□□□□ -1.68
CPSF2-205ENST00000556622 C14orf178Q8N769 122 aaPredicted RBP4.56□□□□□ -1.68
CPSF2-205ENST00000556622 ATP6V0E2Q8NHE4 81 aa4.56□□□□□ -1.68
CPSF2-205ENST00000556622 SPATA3Q8NHX4 192 aa4.56□□□□□ -1.68
CPSF2-205ENST00000556622 RNASE8Q8TDE3 154 aaKnown RBP4.56□□□□□ -1.68
CPSF2-205ENST00000556622 PLEKHB2Q96CS7 222 aa4.56□□□□□ -1.68
CPSF2-205ENST00000556622 MCRIP2Q9BUT9 160 aaKnown RBP4.56□□□□□ -1.68
CPSF2-205ENST00000556622 CSTL1Q9H114 145 aa4.56□□□□□ -1.68
CPSF2-205ENST00000556622 EDA2RQ9HAV5 297 aa4.56□□□□□ -1.68
CPSF2-205ENST00000556622 SPANXB1Q9NS25 103 aaPredicted RBP4.56□□□□□ -1.68
CPSF2-205ENST00000556622 NHP2Q9NX24 153 aaKnown RBP4.56□□□□□ -1.68
CPSF2-205ENST00000556622 TP73-AS1Q9UF72 201 aa4.56□□□□□ -1.68
CPSF2-205ENST00000556622 A8MWV9 139 aa4.55□□□□□ -1.68
CPSF2-205ENST00000556622 I3L3M4 83 aa4.55□□□□□ -1.68
CPSF2-205ENST00000556622 RHODO00212 210 aa4.55□□□□□ -1.68
CPSF2-205ENST00000556622 CD7P09564 240 aa4.55□□□□□ -1.68
CPSF2-205ENST00000556622 LGALS3P17931 250 aaKnown RBP4.55□□□□□ -1.68
CPSF2-205ENST00000556622 HILS1P60008 231 aa4.55□□□□□ -1.68
CPSF2-205ENST00000556622 RPL24P83731 157 aaKnown RBP4.55□□□□□ -1.68
CPSF2-205ENST00000556622 BRD3OSQ6XYD6 125 aa4.55□□□□□ -1.68
CPSF2-205ENST00000556622 TMEM219Q86XT9 240 aa4.55□□□□□ -1.68
CPSF2-205ENST00000556622 RASL10AQ92737 203 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms