RNA–Protein interactions for RNA: ENST00000556498.1

TDP1-215, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-215ENST00000556498 TMEM14CQ9P0S9 112 aa4.4□□□□□ -1.71
TDP1-215ENST00000556498 POLEQ07864 2286 aa4.39□□□□□ -1.71
TDP1-215ENST00000556498 DOCK11Q5JSL3 2073 aa4.39□□□□□ -1.71
TDP1-215ENST00000556498 IGKV1-27A0A075B6S5 117 aa4.39□□□□□ -1.71
TDP1-215ENST00000556498 IGIPA6NJ69 53 aa4.39□□□□□ -1.71
TDP1-215ENST00000556498 C5orf67F2Z3F1 127 aa4.39□□□□□ -1.71
TDP1-215ENST00000556498 JMJD7-PLA2G4BH0Y9G9 81 aa4.39□□□□□ -1.71
TDP1-215ENST00000556498 CHKB-CPT1BH3BT56 60 aa4.39□□□□□ -1.71
TDP1-215ENST00000556498 C10orf25Q5T742 122 aa4.39□□□□□ -1.71
TDP1-215ENST00000556498 ZNF843Q8N446 348 aa4.39□□□□□ -1.71
TDP1-215ENST00000556498 LINC00846Q9NV44 126 aa4.39□□□□□ -1.71
TDP1-215ENST00000556498 SNRNP200O75643 2136 aaKnown RBP4.39□□□□□ -1.71
TDP1-215ENST00000556498 TRGV3P03979 118 aa4.38□□□□□ -1.71
TDP1-215ENST00000556498 FXYD7P58549 80 aa4.38□□□□□ -1.71
TDP1-215ENST00000556498 PDE6HQ13956 83 aa4.38□□□□□ -1.71
TDP1-215ENST00000556498 Q5VV11 94 aa4.38□□□□□ -1.71
TDP1-215ENST00000556498 Q6ZSV7 163 aa4.38□□□□□ -1.71
TDP1-215ENST00000556498 ZNF575Q86XF7 245 aa4.38□□□□□ -1.71
TDP1-215ENST00000556498 C9orf106Q8NAJ2 232 aa4.38□□□□□ -1.71
TDP1-215ENST00000556498 ZNRF1Q8ND25 227 aa4.38□□□□□ -1.71
TDP1-215ENST00000556498 KLF14Q8TD94 323 aaPredicted RBP4.38□□□□□ -1.71
TDP1-215ENST00000556498 MSRB1Q9NZV6 116 aa4.38□□□□□ -1.71
TDP1-215ENST00000556498 SNURFQ9Y675 71 aa4.38□□□□□ -1.71
TDP1-215ENST00000556498 COL4A6Q14031 1691 aa4.38□□□□□ -1.71
TDP1-215ENST00000556498 PLXNA2O75051 1894 aa4.37□□□□□ -1.71
TDP1-215ENST00000556498 LRP4O75096 1905 aa4.37□□□□□ -1.71
TDP1-215ENST00000556498 IGLV2-18A0A075B6J9 118 aa4.37□□□□□ -1.71
TDP1-215ENST00000556498 IGLV3-9A0A075B6K5 115 aa4.37□□□□□ -1.71
TDP1-215ENST00000556498 LINC00271P0C7V0 271 aa4.37□□□□□ -1.71
TDP1-215ENST00000556498 ADAMTSL4-AS1Q5T5F5 129 aa4.37□□□□□ -1.71
TDP1-215ENST00000556498 ZNF833PQ6ZTB9 187 aa4.37□□□□□ -1.71
TDP1-215ENST00000556498 KRTAP4-11Q9BYQ6 195 aa4.37□□□□□ -1.71
TDP1-215ENST00000556498 THADAQ6YHU6 1953 aa4.36□□□□□ -1.71
TDP1-215ENST00000556498 IGLV3-12A0A075B6K2 115 aa4.36□□□□□ -1.71
TDP1-215ENST00000556498 IGHV3-16A0A0C4DH30 117 aa4.36□□□□□ -1.71
TDP1-215ENST00000556498 IGHV5-10-1A0A0J9YXX1 117 aa4.36□□□□□ -1.71
TDP1-215ENST00000556498 IGLV3-1P01715 115 aa4.36□□□□□ -1.71
TDP1-215ENST00000556498 DEFA4P12838 97 aa4.36□□□□□ -1.71
TDP1-215ENST00000556498 ZNF32P17041 273 aa4.36□□□□□ -1.71
TDP1-215ENST00000556498 ELOF1P60002 83 aaKnown RBP4.36□□□□□ -1.71
TDP1-215ENST00000556498 C15orf32Q32M92 178 aa4.36□□□□□ -1.71
TDP1-215ENST00000556498 CASC2Q6XLA1 102 aa4.36□□□□□ -1.71
TDP1-215ENST00000556498 TMEM61Q8N0U2 210 aa4.36□□□□□ -1.71
TDP1-215ENST00000556498 LINC00467Q9BRT7 94 aa4.36□□□□□ -1.71
TDP1-215ENST00000556498 CNFNQ9BYD5 112 aa4.36□□□□□ -1.71
TDP1-215ENST00000556498 KIF25-AS1Q9Y6Z4 181 aa4.36□□□□□ -1.71
TDP1-215ENST00000556498 PHF3Q92576 2039 aaKnown RBP4.35□□□□□ -1.71
TDP1-215ENST00000556498 LOC101927531A0A1B0GV80 90 aa4.35□□□□□ -1.71
TDP1-215ENST00000556498 H0YGX0 51 aa4.35□□□□□ -1.71
TDP1-215ENST00000556498 M0R1W7 72 aa4.35□□□□□ -1.71
TDP1-215ENST00000556498 PSCAO43653 123 aa4.35□□□□□ -1.71
TDP1-215ENST00000556498 SAA2P0DJI9 122 aaPredicted RBP4.35□□□□□ -1.71
TDP1-215ENST00000556498 NANOS2P60321 138 aaKnown RBP4.35□□□□□ -1.71
TDP1-215ENST00000556498 BSPH1Q075Z2 132 aa4.35□□□□□ -1.71
TDP1-215ENST00000556498 ENHOQ6UWT2 76 aa4.35□□□□□ -1.71
TDP1-215ENST00000556498 Q86TA4 180 aa4.35□□□□□ -1.71
TDP1-215ENST00000556498 COL4A4P53420 1690 aaPredicted RBP4.35□□□□□ -1.71
TDP1-215ENST00000556498 NDUFB1O75438 58 aa4.34□□□□□ -1.71
TDP1-215ENST00000556498 RPS27P42677 84 aaKnown RBP4.34□□□□□ -1.71
TDP1-215ENST00000556498 MIAQ16674 131 aa4.34□□□□□ -1.71
TDP1-215ENST00000556498 FAM74A4Q5TZK3 123 aa4.34□□□□□ -1.71
TDP1-215ENST00000556498 LYZL1Q6UWQ5 148 aa4.34□□□□□ -1.71
TDP1-215ENST00000556498 AMELXQ99217 191 aa4.34□□□□□ -1.71
TDP1-215ENST00000556498 TDRD6O60522 2096 aaKnown RBP4.34□□□□□ -1.71
TDP1-215ENST00000556498 GOLGB1Q14789 3259 aaKnown RBP4.33□□□□□ -1.72
TDP1-215ENST00000556498 IGKV1D-42A0A075B6H8 117 aa4.33□□□□□ -1.72
TDP1-215ENST00000556498 IGHV3-72A0A0B4J1Y9 119 aa4.33□□□□□ -1.72
TDP1-215ENST00000556498 ATP6V0E1O15342 81 aa4.33□□□□□ -1.72
TDP1-215ENST00000556498 IGHV3-43DP0DP04 118 aa4.33□□□□□ -1.72
TDP1-215ENST00000556498 DEFB103AP81534 67 aa4.33□□□□□ -1.72
TDP1-215ENST00000556498 NREPQ16612 68 aa4.33□□□□□ -1.72
TDP1-215ENST00000556498 C10orf128Q5T292 105 aa4.33□□□□□ -1.72
TDP1-215ENST00000556498 C10orf113Q5VZT2 155 aa4.33□□□□□ -1.72
TDP1-215ENST00000556498 LINC00322Q6ZN03 302 aaPredicted RBP4.33□□□□□ -1.72
TDP1-215ENST00000556498 LYPD1Q8N2G4 141 aa4.33□□□□□ -1.72
TDP1-215ENST00000556498 KLHL30-AS1Q8NEE0 82 aa4.33□□□□□ -1.72
TDP1-215ENST00000556498 RPL36ALQ969Q0 106 aaKnown RBP4.33□□□□□ -1.72
TDP1-215ENST00000556498 RETNLBQ9BQ08 111 aa4.33□□□□□ -1.72
TDP1-215ENST00000556498 CDC42SE2Q9NRR3 84 aa4.33□□□□□ -1.72
TDP1-215ENST00000556498 CELA1Q9UNI1 258 aa4.33□□□□□ -1.72
TDP1-215ENST00000556498 MYO9BQ13459 2157 aa4.32□□□□□ -1.72
TDP1-215ENST00000556498 A6NED7 52 aa4.32□□□□□ -1.72
TDP1-215ENST00000556498 NTN3O00634 580 aaPredicted RBP4.32□□□□□ -1.72
TDP1-215ENST00000556498 PDE6GP18545 87 aa4.32□□□□□ -1.72
TDP1-215ENST00000556498 MRPS21P82921 87 aaKnown RBP4.32□□□□□ -1.72
TDP1-215ENST00000556498 C1orf64Q8NEQ6 169 aa4.32□□□□□ -1.72
TDP1-215ENST00000556498 LINC00574Q9H8X3 128 aa4.32□□□□□ -1.72
TDP1-215ENST00000556498 MRPL36Q9P0J6 103 aaKnown RBP4.32□□□□□ -1.72
TDP1-215ENST00000556498 AGRNO00468 2067 aa4.32□□□□□ -1.72
TDP1-215ENST00000556498 EML6Q6ZMW3 1958 aa4.32□□□□□ -1.72
TDP1-215ENST00000556498 UTRNP46939 3433 aa4.31□□□□□ -1.72
TDP1-215ENST00000556498 LTBP2Q14767 1821 aa4.31□□□□□ -1.72
TDP1-215ENST00000556498 IGKV1-12A0A0C4DH73 117 aa4.31□□□□□ -1.72
TDP1-215ENST00000556498 DNAJC9-AS1A6NH13 148 aa4.31□□□□□ -1.72
TDP1-215ENST00000556498 H3BQ85 93 aa4.31□□□□□ -1.72
TDP1-215ENST00000556498 K7EQG2 157 aa4.31□□□□□ -1.72
TDP1-215ENST00000556498 IGKV1D-12P01611 117 aa4.31□□□□□ -1.72
TDP1-215ENST00000556498 ATG2BQ96BY7 2078 aa4.31□□□□□ -1.72
TDP1-215ENST00000556498 PCNX3Q9H6A9 2034 aa4.31□□□□□ -1.72
TDP1-215ENST00000556498 DOCK7Q96N67 2140 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms