RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 TRBV12-3P01733 135 aa3.69□□□□□ -1.82
SRP54-211ENST00000556445 KRTAP10-12P60413 245 aa3.69□□□□□ -1.82
SRP54-211ENST00000556445 SNRPD3P62318 126 aaKnown RBP3.69□□□□□ -1.82
SRP54-211ENST00000556445 C9orf66Q5T8R8 295 aa3.69□□□□□ -1.82
SRP54-211ENST00000556445 UNQ9165/PRO28630Q6UXU0 137 aa3.69□□□□□ -1.82
SRP54-211ENST00000556445 LINC00322Q6ZN03 302 aaPredicted RBP3.69□□□□□ -1.82
SRP54-211ENST00000556445 TCF24Q7RTU0 167 aa3.69□□□□□ -1.82
SRP54-211ENST00000556445 WFDC11Q8NEX6 87 aa3.69□□□□□ -1.82
SRP54-211ENST00000556445 C4orf3Q8WVX3 66 aa3.69□□□□□ -1.82
SRP54-211ENST00000556445 HIST1H2BLQ99880 126 aa3.69□□□□□ -1.82
SRP54-211ENST00000556445 VGLL1Q99990 258 aa3.69□□□□□ -1.82
SRP54-211ENST00000556445 SAMD10Q9BYL1 202 aa3.69□□□□□ -1.82
SRP54-211ENST00000556445 NIT2Q9NQR4 276 aa3.69□□□□□ -1.82
SRP54-211ENST00000556445 EPG5Q9HCE0 2579 aa3.69□□□□□ -1.82
SRP54-211ENST00000556445 PTPN13Q12923 2485 aa3.69□□□□□ -1.82
SRP54-211ENST00000556445 ASPMQ8IZT6 3477 aa3.69□□□□□ -1.82
SRP54-211ENST00000556445 LRRK2Q5S007 2527 aa3.69□□□□□ -1.82
SRP54-211ENST00000556445 CREBBPQ92793 2442 aa3.69□□□□□ -1.82
SRP54-211ENST00000556445 NAV2Q8IVL1 2488 aa3.68□□□□□ -1.82
SRP54-211ENST00000556445 CFAP46Q8IYW2 2715 aa3.68□□□□□ -1.82
SRP54-211ENST00000556445 IGHV3-49A0A0A0MS15 119 aa3.68□□□□□ -1.82
SRP54-211ENST00000556445 IGHV3-74A0A0B4J1X5 117 aa3.68□□□□□ -1.82
SRP54-211ENST00000556445 TRAV21A0A0B4J279 112 aa3.68□□□□□ -1.82
SRP54-211ENST00000556445 IGHV3-66A0A0C4DH42 116 aa3.68□□□□□ -1.82
SRP54-211ENST00000556445 ZNF705FA8MVS1 300 aaPredicted RBP3.68□□□□□ -1.82
SRP54-211ENST00000556445 LINC00587B1AMM8 73 aa3.68□□□□□ -1.82
SRP54-211ENST00000556445 SOCS3O14543 225 aa3.68□□□□□ -1.82
SRP54-211ENST00000556445 PSPHP1O15172 72 aa3.68□□□□□ -1.82
SRP54-211ENST00000556445 DUSP14O95147 198 aaKnown RBP3.68□□□□□ -1.82
SRP54-211ENST00000556445 ATP5G1P05496 136 aa3.68□□□□□ -1.82
SRP54-211ENST00000556445 SRIP30626 198 aa3.68□□□□□ -1.82
SRP54-211ENST00000556445 CRIP1P50238 77 aa3.68□□□□□ -1.82
SRP54-211ENST00000556445 PMAIP1Q13794 54 aa3.68□□□□□ -1.82
SRP54-211ENST00000556445 JOSD1Q15040 202 aaPredicted RBP3.68□□□□□ -1.82
SRP54-211ENST00000556445 IQCJQ1A5X6 159 aa3.68□□□□□ -1.82
SRP54-211ENST00000556445 ZNF876PQ49A33 203 aa3.68□□□□□ -1.82
SRP54-211ENST00000556445 ZNF493Q6ZR52 646 aa3.68□□□□□ -1.82
SRP54-211ENST00000556445 KRTAP7-1Q8IUC3 87 aa3.68□□□□□ -1.82
SRP54-211ENST00000556445 FER1L6-AS1Q8NA97 138 aa3.68□□□□□ -1.82
SRP54-211ENST00000556445 GTSF1Q8WW33 167 aa3.68□□□□□ -1.82
SRP54-211ENST00000556445 KCNS1Q96KK3 526 aa3.68□□□□□ -1.82
SRP54-211ENST00000556445 ODF3Q96PU9 254 aa3.68□□□□□ -1.82
SRP54-211ENST00000556445 AGPAT4-IT1Q9H0P7 198 aa3.68□□□□□ -1.82
SRP54-211ENST00000556445 EDA2RQ9HAV5 297 aa3.68□□□□□ -1.82
SRP54-211ENST00000556445 LOC102724200A0A096LPH7 203 aaPredicted RBP3.67□□□□□ -1.82
SRP54-211ENST00000556445 GRIFINA4D1Z8 144 aa3.67□□□□□ -1.82
SRP54-211ENST00000556445 ZNF324O75467 553 aaPredicted RBP3.67□□□□□ -1.82
SRP54-211ENST00000556445 SERF1AO75920 110 aa3.67□□□□□ -1.82
SRP54-211ENST00000556445 GPX1P07203 203 aa3.67□□□□□ -1.82
SRP54-211ENST00000556445 ARMS2P0C7Q2 107 aa3.67□□□□□ -1.82
SRP54-211ENST00000556445 IGLC6P0CF74 106 aa3.67□□□□□ -1.82
SRP54-211ENST00000556445 HLA-DMBP28068 263 aa3.67□□□□□ -1.82
SRP54-211ENST00000556445 PSMB2P49721 201 aa3.67□□□□□ -1.82
SRP54-211ENST00000556445 RIPPLY3P57055 190 aa3.67□□□□□ -1.82
SRP54-211ENST00000556445 ERCC8Q13216 396 aa3.67□□□□□ -1.82
SRP54-211ENST00000556445 PMVKQ15126 192 aa3.67□□□□□ -1.82
SRP54-211ENST00000556445 PRR4Q16378 134 aa3.67□□□□□ -1.82
SRP54-211ENST00000556445 PYY3Q5JQD4 70 aa3.67□□□□□ -1.82
SRP54-211ENST00000556445 EBLN2Q6P2I7 272 aa3.67□□□□□ -1.82
SRP54-211ENST00000556445 LYZL1Q6UWQ5 148 aa3.67□□□□□ -1.82
SRP54-211ENST00000556445 RNF182Q8N6D2 247 aa3.67□□□□□ -1.82
SRP54-211ENST00000556445 OR8A1Q8NGG7 326 aa3.67□□□□□ -1.82
SRP54-211ENST00000556445 OR2K2Q8NGT1 345 aa3.67□□□□□ -1.82
SRP54-211ENST00000556445 Q8TAT8 98 aa3.67□□□□□ -1.82
SRP54-211ENST00000556445 C18orf32Q8TCD1 76 aa3.67□□□□□ -1.82
SRP54-211ENST00000556445 CHCHD1Q96BP2 118 aaKnown RBP3.67□□□□□ -1.82
SRP54-211ENST00000556445 CNFNQ9BYD5 112 aa3.67□□□□□ -1.82
SRP54-211ENST00000556445 TMEM191AQ9H0A3 160 aa3.67□□□□□ -1.82
SRP54-211ENST00000556445 C16orf95Q9H693 158 aa3.67□□□□□ -1.82
SRP54-211ENST00000556445 SPANXA1Q9NS26 97 aa3.67□□□□□ -1.82
SRP54-211ENST00000556445 SS18L2Q9UHA2 77 aa3.67□□□□□ -1.82
SRP54-211ENST00000556445 PKIGQ9Y2B9 76 aa3.67□□□□□ -1.82
SRP54-211ENST00000556445 LAMTOR2Q9Y2Q5 125 aa3.67□□□□□ -1.82
SRP54-211ENST00000556445 PYGO1Q9Y3Y4 419 aa3.67□□□□□ -1.82
SRP54-211ENST00000556445 UBR5O95071 2799 aaPredicted RBP3.67□□□□□ -1.82
SRP54-211ENST00000556445 ZZEF1O43149 2961 aa3.66□□□□□ -1.82
SRP54-211ENST00000556445 USP9YO00507 2555 aaPredicted RBP3.66□□□□□ -1.82
SRP54-211ENST00000556445 LAMA5O15230 3695 aa3.66□□□□□ -1.82
SRP54-211ENST00000556445 SMIM26A0A096LP01 95 aa3.66□□□□□ -1.82
SRP54-211ENST00000556445 C2orf70A6NJV1 201 aa3.66□□□□□ -1.82
SRP54-211ENST00000556445 CMC4P56277 68 aaPredicted RBP3.66□□□□□ -1.82
SRP54-211ENST00000556445 SYNJ2BPP57105 145 aa3.66□□□□□ -1.82
SRP54-211ENST00000556445 REG3AQ06141 175 aa3.66□□□□□ -1.82
SRP54-211ENST00000556445 EGFEM1PQ0D2K5 195 aa3.66□□□□□ -1.82
SRP54-211ENST00000556445 C6orf99Q4VX62 202 aa3.66□□□□□ -1.82
SRP54-211ENST00000556445 ADAMTSL4-AS1Q5T5F5 129 aa3.66□□□□□ -1.82
SRP54-211ENST00000556445 FAM104BQ5XKR9 115 aa3.66□□□□□ -1.82
SRP54-211ENST00000556445 ORMDL3Q8N138 153 aa3.66□□□□□ -1.82
SRP54-211ENST00000556445 TMEM256Q8N2U0 113 aa3.66□□□□□ -1.82
SRP54-211ENST00000556445 LINC00337Q8N6G1 96 aa3.66□□□□□ -1.82
SRP54-211ENST00000556445 DCANP1Q8TF63 244 aa3.66□□□□□ -1.82
SRP54-211ENST00000556445 SPENQ96T58 3664 aaKnown RBP3.65□□□□□ -1.82
SRP54-211ENST00000556445 TMSB15BA0A087X1C1 80 aa3.65□□□□□ -1.83
SRP54-211ENST00000556445 PPP1R17O96001 155 aa3.65□□□□□ -1.83
SRP54-211ENST00000556445 GZMBP10144 247 aa3.65□□□□□ -1.83
SRP54-211ENST00000556445 NTF3P20783 257 aa3.65□□□□□ -1.83
SRP54-211ENST00000556445 S100A4P26447 101 aaKnown RBP3.65□□□□□ -1.83
SRP54-211ENST00000556445 DDTP30046 118 aa3.65□□□□□ -1.83
SRP54-211ENST00000556445 ASIPP42127 132 aa3.65□□□□□ -1.83
SRP54-211ENST00000556445 ZNF80P51504 273 aaPredicted RBP3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms