RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 CACNG7P62955 275 aa6.58□□□□□ -1.36
SRP54-210ENST00000556380 TMEM241Q24JQ0 296 aa6.58□□□□□ -1.36
SRP54-210ENST00000556380 TPPP3Q9BW30 176 aa6.58□□□□□ -1.36
SRP54-210ENST00000556380 OSTCQ9NRP0 149 aa6.58□□□□□ -1.36
SRP54-210ENST00000556380 DYNC1H1Q14204 4646 aaKnown RBP6.57□□□□□ -1.36
SRP54-210ENST00000556380 TRBV10-1A0A0K0K1A3 114 aa6.57□□□□□ -1.36
SRP54-210ENST00000556380 GAGE12JA6NER3 117 aa6.57□□□□□ -1.36
SRP54-210ENST00000556380 A8MWL6 223 aa6.57□□□□□ -1.36
SRP54-210ENST00000556380 SIVA1O15304 175 aa6.57□□□□□ -1.36
SRP54-210ENST00000556380 NTF3P20783 257 aa6.57□□□□□ -1.36
SRP54-210ENST00000556380 ERVFC1-1P60608 527 aa6.57□□□□□ -1.36
SRP54-210ENST00000556380 RPL23P62829 140 aaKnown RBP6.57□□□□□ -1.36
SRP54-210ENST00000556380 GAGE1Q13065 139 aa6.57□□□□□ -1.36
SRP54-210ENST00000556380 GAGE4Q13068 117 aa6.57□□□□□ -1.36
SRP54-210ENST00000556380 GAGE5Q13069 117 aa6.57□□□□□ -1.36
SRP54-210ENST00000556380 GAGE13Q4V321 117 aa6.57□□□□□ -1.36
SRP54-210ENST00000556380 SOHLH1Q5JUK2 328 aa6.57□□□□□ -1.36
SRP54-210ENST00000556380 OR10G8Q8NGN5 311 aa6.57□□□□□ -1.36
SRP54-210ENST00000556380 ATP6V0E2Q8NHE4 81 aa6.57□□□□□ -1.36
SRP54-210ENST00000556380 ISOC2Q96AB3 205 aa6.57□□□□□ -1.36
SRP54-210ENST00000556380 GTSF1LQ9H1H1 148 aa6.57□□□□□ -1.36
SRP54-210ENST00000556380 NAT8Q9UHE5 227 aa6.57□□□□□ -1.36
SRP54-210ENST00000556380 DNAH10OSP0CZ25 163 aa6.56□□□□□ -1.36
SRP54-210ENST00000556380 EVI2AP22794 236 aa6.56□□□□□ -1.36
SRP54-210ENST00000556380 C1orf134Q5TEV5 83 aa6.56□□□□□ -1.36
SRP54-210ENST00000556380 UQCC3Q6UW78 93 aa6.56□□□□□ -1.36
SRP54-210ENST00000556380 WFDC10BQ8IUB3 73 aa6.56□□□□□ -1.36
SRP54-210ENST00000556380 C15orf54Q8N8G6 183 aa6.56□□□□□ -1.36
SRP54-210ENST00000556380 AP1S3Q96PC3 154 aa6.56□□□□□ -1.36
SRP54-210ENST00000556380 GFRA4Q9GZZ7 299 aa6.56□□□□□ -1.36
SRP54-210ENST00000556380 V9GYV3 84 aa6.56□□□□□ -1.36
SRP54-210ENST00000556380 TRBV7-3A0A075B6L6 115 aa6.55□□□□□ -1.36
SRP54-210ENST00000556380 M0QY20 66 aa6.55□□□□□ -1.36
SRP54-210ENST00000556380 SMIM17P0DL12 118 aa6.55□□□□□ -1.36
SRP54-210ENST00000556380 UBE2D3P61077 147 aa6.55□□□□□ -1.36
SRP54-210ENST00000556380 UBE2D2P62837 147 aa6.55□□□□□ -1.36
SRP54-210ENST00000556380 TTC32Q5I0X7 151 aa6.55□□□□□ -1.36
SRP54-210ENST00000556380 LELP1Q5T871 98 aa6.55□□□□□ -1.36
SRP54-210ENST00000556380 TSKUQ8WUA8 353 aa6.55□□□□□ -1.36
SRP54-210ENST00000556380 A0A1B0GVY2 172 aa6.54□□□□□ -1.36
SRP54-210ENST00000556380 K7EP13 123 aa6.54□□□□□ -1.36
SRP54-210ENST00000556380 TRGC1P0CF51 173 aa6.54□□□□□ -1.36
SRP54-210ENST00000556380 BTF3P20290 206 aaKnown RBP6.54□□□□□ -1.36
SRP54-210ENST00000556380 PNRC1Q12796 327 aaPredicted RBP6.54□□□□□ -1.36
SRP54-210ENST00000556380 TWIST1Q15672 202 aa6.54□□□□□ -1.36
SRP54-210ENST00000556380 ADIRFQ15847 76 aa6.54□□□□□ -1.36
SRP54-210ENST00000556380 ZNF56Q15929 161 aa6.54□□□□□ -1.36
SRP54-210ENST00000556380 LINC00336Q6ZUF6 198 aa6.54□□□□□ -1.36
SRP54-210ENST00000556380 C6orf223Q8N319 242 aa6.54□□□□□ -1.36
SRP54-210ENST00000556380 NEXN-AS1Q8NBZ9 246 aa6.54□□□□□ -1.36
SRP54-210ENST00000556380 PGLYRP4Q96LB8 373 aa6.54□□□□□ -1.36
SRP54-210ENST00000556380 F5H697 171 aa6.53□□□□□ -1.36
SRP54-210ENST00000556380 RPL36AP83881 106 aaKnown RBP6.53□□□□□ -1.36
SRP54-210ENST00000556380 LINC01556Q5JQF7 62 aa6.53□□□□□ -1.36
SRP54-210ENST00000556380 SUMO4Q6EEV6 95 aa6.53□□□□□ -1.36
SRP54-210ENST00000556380 Q6ZRN7 208 aaPredicted RBP6.53□□□□□ -1.36
SRP54-210ENST00000556380 RPL36ALQ969Q0 106 aaKnown RBP6.53□□□□□ -1.36
SRP54-210ENST00000556380 BORCS7Q96B45 105 aa6.53□□□□□ -1.36
SRP54-210ENST00000556380 DPH3P1Q9H4G8 78 aa6.53□□□□□ -1.36
SRP54-210ENST00000556380 TRAV8-6A0A0B4J262 113 aa6.52□□□□□ -1.37
SRP54-210ENST00000556380 IGHV3-38A0A0C4DH36 116 aa6.52□□□□□ -1.37
SRP54-210ENST00000556380 SMIM27A0A1W2PRY6 76 aa6.52□□□□□ -1.37
SRP54-210ENST00000556380 HIGD1CA8MV81 97 aa6.52□□□□□ -1.37
SRP54-210ENST00000556380 H7C1H1 209 aa6.52□□□□□ -1.37
SRP54-210ENST00000556380 SMIM15Q7Z3B0 74 aa6.52□□□□□ -1.37
SRP54-210ENST00000556380 NUP35Q8NFH5 326 aa6.52□□□□□ -1.37
SRP54-210ENST00000556380 FRZBQ92765 325 aa6.52□□□□□ -1.37
SRP54-210ENST00000556380 A0A087WWC5 75 aa6.51□□□□□ -1.37
SRP54-210ENST00000556380 A0A1B0GUT8 65 aa6.51□□□□□ -1.37
SRP54-210ENST00000556380 PRSS29PA6NIE9 313 aa6.51□□□□□ -1.37
SRP54-210ENST00000556380 PPP1R2P9O14990 202 aa6.51□□□□□ -1.37
SRP54-210ENST00000556380 MGPP08493 103 aa6.51□□□□□ -1.37
SRP54-210ENST00000556380 ANKRD39Q53RE8 183 aa6.51□□□□□ -1.37
SRP54-210ENST00000556380 OR10J3Q5JRS4 329 aa6.51□□□□□ -1.37
SRP54-210ENST00000556380 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.51□□□□□ -1.37
SRP54-210ENST00000556380 GATD1Q8NB37 220 aa6.51□□□□□ -1.37
SRP54-210ENST00000556380 DNAJC30Q96LL9 226 aa6.51□□□□□ -1.37
SRP54-210ENST00000556380 NAT8BQ9UHF3 227 aa6.51□□□□□ -1.37
SRP54-210ENST00000556380 TNFRSF18Q9Y5U5 241 aa6.51□□□□□ -1.37
SRP54-210ENST00000556380 DNAH5Q8TE73 4624 aa6.51□□□□□ -1.37
SRP54-210ENST00000556380 LRP1BQ9NZR2 4599 aa6.5□□□□□ -1.37
SRP54-210ENST00000556380 TRAV9-2A0A087WT02 112 aa6.5□□□□□ -1.37
SRP54-210ENST00000556380 A0A1B0GW15 77 aa6.5□□□□□ -1.37
SRP54-210ENST00000556380 IBA57-AS1B1ANH7 110 aa6.5□□□□□ -1.37
SRP54-210ENST00000556380 RASL11AQ6T310 242 aa6.5□□□□□ -1.37
SRP54-210ENST00000556380 NTM-AS1Q6ZSK4 140 aa6.5□□□□□ -1.37
SRP54-210ENST00000556380 TMEM191AQ9H0A3 160 aa6.5□□□□□ -1.37
SRP54-210ENST00000556380 NIT2Q9NQR4 276 aa6.5□□□□□ -1.37
SRP54-210ENST00000556380 TRBV6-8A0A0A6YYG3 113 aa6.49□□□□□ -1.37
SRP54-210ENST00000556380 TMEM218A2RU14 115 aa6.49□□□□□ -1.37
SRP54-210ENST00000556380 LINC00862A6NCI5 91 aa6.49□□□□□ -1.37
SRP54-210ENST00000556380 TMEM97Q5BJF2 176 aa6.49□□□□□ -1.37
SRP54-210ENST00000556380 DAZ4Q86SG3 579 aaKnown RBP6.49□□□□□ -1.37
SRP54-210ENST00000556380 NIT1Q86X76 327 aa6.49□□□□□ -1.37
SRP54-210ENST00000556380 ANAPC16Q96DE5 110 aa6.49□□□□□ -1.37
SRP54-210ENST00000556380 RNF185Q96GF1 192 aa6.49□□□□□ -1.37
SRP54-210ENST00000556380 DAZ3Q9NR90 486 aaKnown RBP6.49□□□□□ -1.37
SRP54-210ENST00000556380 TRAV26-2A0A0B4J265 109 aa6.48□□□□□ -1.37
SRP54-210ENST00000556380 GAS8-AS1O95177 125 aa6.48□□□□□ -1.37
SRP54-210ENST00000556380 MT-ND4LP03901 98 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms