RNA–Protein interactions for RNA: ENST00000556333.1

RCCD1-205, Transcript of RCC1 domain containing 1, humanhuman

TSL 1 (best)

Gene RCCD1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-205ENST00000556333 ADCYAP1P18509 176 aa13.82□□□□□ -0.2
RCCD1-205ENST00000556333 TTC32Q5I0X7 151 aa13.82□□□□□ -0.2
RCCD1-205ENST00000556333 LELP1Q5T871 98 aa13.82□□□□□ -0.2
RCCD1-205ENST00000556333 Q6ZR54 194 aa13.82□□□□□ -0.2
RCCD1-205ENST00000556333 TNFRSF18Q9Y5U5 241 aa13.82□□□□□ -0.2
RCCD1-205ENST00000556333 M0QY20 66 aa13.81□□□□□ -0.2
RCCD1-205ENST00000556333 UBE2D3P61077 147 aa13.81□□□□□ -0.2
RCCD1-205ENST00000556333 UBE2D2P62837 147 aa13.81□□□□□ -0.2
RCCD1-205ENST00000556333 RASL11AQ6T310 242 aa13.81□□□□□ -0.2
RCCD1-205ENST00000556333 ANAPC16Q96DE5 110 aa13.81□□□□□ -0.2
RCCD1-205ENST00000556333 IGHV3-38A0A0C4DH36 116 aa13.8□□□□□ -0.2
RCCD1-205ENST00000556333 SEC11CQ9BY50 192 aa13.8□□□□□ -0.2
RCCD1-205ENST00000556333 TRAV26-2A0A0B4J265 109 aa13.79□□□□□ -0.2
RCCD1-205ENST00000556333 DNAJC30Q96LL9 226 aa13.79□□□□□ -0.2
RCCD1-205ENST00000556333 A0A087WWC5 75 aa13.78□□□□□ -0.2
RCCD1-205ENST00000556333 C1orf134Q5TEV5 83 aa13.78□□□□□ -0.2
RCCD1-205ENST00000556333 TMEM191AQ9H0A3 160 aa13.78□□□□□ -0.2
RCCD1-205ENST00000556333 NIT2Q9NQR4 276 aa13.78□□□□□ -0.2
RCCD1-205ENST00000556333 TRAV9-2A0A087WT02 112 aa13.77□□□□□ -0.21
RCCD1-205ENST00000556333 CAMPP49913 170 aa13.77□□□□□ -0.21
RCCD1-205ENST00000556333 MRPL54Q6P161 138 aaKnown RBP13.77□□□□□ -0.21
RCCD1-205ENST00000556333 GATD1Q8NB37 220 aa13.77□□□□□ -0.21
RCCD1-205ENST00000556333 DNAH6Q9C0G6 4158 aa13.77□□□□□ -0.21
RCCD1-205ENST00000556333 KRTAP1-5Q9BYS1 174 aa13.76□□□□□ -0.21
RCCD1-205ENST00000556333 HERC2O95714 4834 aa13.76□□□□□ -0.21
RCCD1-205ENST00000556333 IGHV3-30P01768 117 aa13.75□□□□□ -0.21
RCCD1-205ENST00000556333 IGHV3-33P01772 117 aa13.75□□□□□ -0.21
RCCD1-205ENST00000556333 DNAH10OSP0CZ25 163 aa13.75□□□□□ -0.21
RCCD1-205ENST00000556333 IGHV3-30-3P0DP02 117 aa13.75□□□□□ -0.21
RCCD1-205ENST00000556333 IGHV3-30-5P0DP03 117 aa13.75□□□□□ -0.21
RCCD1-205ENST00000556333 DAZ4Q86SG3 579 aaKnown RBP13.75□□□□□ -0.21
RCCD1-205ENST00000556333 AMN1Q8IY45 258 aa13.75□□□□□ -0.21
RCCD1-205ENST00000556333 C6orf223Q8N319 242 aa13.75□□□□□ -0.21
RCCD1-205ENST00000556333 DAZ3Q9NR90 486 aaKnown RBP13.75□□□□□ -0.21
RCCD1-205ENST00000556333 A0A1B0GW15 77 aa13.74□□□□□ -0.21
RCCD1-205ENST00000556333 S100A8P05109 93 aa13.73□□□□□ -0.21
RCCD1-205ENST00000556333 RAB4AP20338 218 aa13.73□□□□□ -0.21
RCCD1-205ENST00000556333 HBBP68871 147 aa13.73□□□□□ -0.21
RCCD1-205ENST00000556333 TMEM97Q5BJF2 176 aa13.73□□□□□ -0.21
RCCD1-205ENST00000556333 RPL39LQ96EH5 51 aaKnown RBP13.73□□□□□ -0.21
RCCD1-205ENST00000556333 URGCP-MRPS24S4R325 110 aa13.73□□□□□ -0.21
RCCD1-205ENST00000556333 LINC01556Q5JQF7 62 aa13.72□□□□□ -0.21
RCCD1-205ENST00000556333 KCNIP4Q6PIL6 250 aa13.72□□□□□ -0.21
RCCD1-205ENST00000556333 RNF185Q96GF1 192 aa13.72□□□□□ -0.21
RCCD1-205ENST00000556333 FRAS1Q86XX4 4008 aa13.71□□□□□ -0.21
RCCD1-205ENST00000556333 TRBV6-8A0A0A6YYG3 113 aa13.71□□□□□ -0.21
RCCD1-205ENST00000556333 C10orf126Q8N4M7 172 aa13.71□□□□□ -0.21
RCCD1-205ENST00000556333 FRZBQ92765 325 aa13.71□□□□□ -0.21
RCCD1-205ENST00000556333 K7EP13 123 aa13.7□□□□□ -0.22
RCCD1-205ENST00000556333 RTL8CO15255 209 aa13.7□□□□□ -0.22
RCCD1-205ENST00000556333 C10orf91Q5T1B1 145 aa13.7□□□□□ -0.22
RCCD1-205ENST00000556333 DEFB104AQ8WTQ1 72 aa13.7□□□□□ -0.22
RCCD1-205ENST00000556333 MRAP2Q96G30 205 aa13.7□□□□□ -0.22
RCCD1-205ENST00000556333 CTDSP1Q9GZU7 261 aa13.7□□□□□ -0.22
RCCD1-205ENST00000556333 CARHSP1Q9Y2V2 147 aaKnown RBP13.7□□□□□ -0.22
RCCD1-205ENST00000556333 PCLOQ9Y6V0 5065 aa13.69□□□□□ -0.22
RCCD1-205ENST00000556333 TRBV25-1A0A075B6N4 114 aa13.69□□□□□ -0.22
RCCD1-205ENST00000556333 FAM104BQ5XKR9 115 aa13.69□□□□□ -0.22
RCCD1-205ENST00000556333 LINC00336Q6ZUF6 198 aa13.69□□□□□ -0.22
RCCD1-205ENST00000556333 ATP5L2Q7Z4Y8 100 aa13.69□□□□□ -0.22
RCCD1-205ENST00000556333 CHCHD5Q9BSY4 110 aa13.69□□□□□ -0.22
RCCD1-205ENST00000556333 A0A1B0GXF2 115 aa13.68□□□□□ -0.22
RCCD1-205ENST00000556333 PRSS29PA6NIE9 313 aa13.68□□□□□ -0.22
RCCD1-205ENST00000556333 TMEM262E9PQX1 116 aa13.68□□□□□ -0.22
RCCD1-205ENST00000556333 GAS8-AS1O95177 125 aa13.68□□□□□ -0.22
RCCD1-205ENST00000556333 NCR2O95944 276 aa13.68□□□□□ -0.22
RCCD1-205ENST00000556333 NDUFA5Q16718 116 aa13.68□□□□□ -0.22
RCCD1-205ENST00000556333 NTM-AS1Q6ZSK4 140 aa13.68□□□□□ -0.22
RCCD1-205ENST00000556333 Q8N3U1 123 aa13.68□□□□□ -0.22
RCCD1-205ENST00000556333 A0A087WX48 190 aa13.67□□□□□ -0.22
RCCD1-205ENST00000556333 IGHV1-24A0A0C4DH33 117 aa13.67□□□□□ -0.22
RCCD1-205ENST00000556333 SMKR1H3BMG3 65 aa13.67□□□□□ -0.22
RCCD1-205ENST00000556333 COTL1Q14019 142 aa13.67□□□□□ -0.22
RCCD1-205ENST00000556333 MRPL51Q4U2R6 128 aaKnown RBP13.67□□□□□ -0.22
RCCD1-205ENST00000556333 NIT1Q86X76 327 aa13.67□□□□□ -0.22
RCCD1-205ENST00000556333 BTF3L4Q96K17 158 aa13.67□□□□□ -0.22
RCCD1-205ENST00000556333 ST20Q9HBF5 79 aa13.67□□□□□ -0.22
RCCD1-205ENST00000556333 RPS10P5Q9NQ39 176 aa13.67□□□□□ -0.22
RCCD1-205ENST00000556333 C7orf77A4D0Y5 90 aa13.66□□□□□ -0.22
RCCD1-205ENST00000556333 SDHAF1A6NFY7 115 aa13.66□□□□□ -0.22
RCCD1-205ENST00000556333 APOC3P02656 99 aa13.66□□□□□ -0.22
RCCD1-205ENST00000556333 CLRN3Q8NCR9 226 aa13.66□□□□□ -0.22
RCCD1-205ENST00000556333 IMMP2LQ96T52 175 aa13.66□□□□□ -0.22
RCCD1-205ENST00000556333 BTF3P20290 206 aaKnown RBP13.65□□□□□ -0.22
RCCD1-205ENST00000556333 PMCHP20382 165 aa13.65□□□□□ -0.22
RCCD1-205ENST00000556333 S100PP25815 95 aa13.65□□□□□ -0.22
RCCD1-205ENST00000556333 RPS10P46783 165 aaKnown RBP13.65□□□□□ -0.22
RCCD1-205ENST00000556333 CKS2P33552 79 aa13.64□□□□□ -0.23
RCCD1-205ENST00000556333 RHEBQ15382 184 aa13.64□□□□□ -0.23
RCCD1-205ENST00000556333 NFE4Q86UQ8 179 aa13.64□□□□□ -0.23
RCCD1-205ENST00000556333 Q9HAA7 133 aa13.64□□□□□ -0.23
RCCD1-205ENST00000556333 TRBV6-5A0A0K0K1A5 114 aa13.63□□□□□ -0.23
RCCD1-205ENST00000556333 IBA57-AS1B1ANH7 110 aa13.63□□□□□ -0.23
RCCD1-205ENST00000556333 PPP1R17O96001 155 aa13.63□□□□□ -0.23
RCCD1-205ENST00000556333 AMTP48728 403 aa13.63□□□□□ -0.23
RCCD1-205ENST00000556333 PKIAP61925 76 aa13.63□□□□□ -0.23
RCCD1-205ENST00000556333 GAGE6Q13070 117 aa13.63□□□□□ -0.23
RCCD1-205ENST00000556333 IQCJQ1A5X6 159 aa13.63□□□□□ -0.23
RCCD1-205ENST00000556333 TMEM243Q9BU79 118 aa13.63□□□□□ -0.23
RCCD1-205ENST00000556333 I3L3M4 83 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms