RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 NPFFO15130 113 aa-0.15□□□□□ -2.43
SCFD1-218ENST00000556256 FAM213BQ8TBF2 198 aa-0.15□□□□□ -2.43
SCFD1-218ENST00000556256 WFDC6Q9BQY6 131 aa-0.15□□□□□ -2.43
SCFD1-218ENST00000556256 RPRMQ9NS64 109 aa-0.15□□□□□ -2.43
SCFD1-218ENST00000556256 U3KQA8 63 aa-0.15□□□□□ -2.43
SCFD1-218ENST00000556256 FHAD1B1AJZ9 1412 aa-0.15□□□□□ -2.43
SCFD1-218ENST00000556256 PTPRQQ9UMZ3 2332 aa-0.15□□□□□ -2.43
SCFD1-218ENST00000556256 CDK5RAP2Q96SN8 1893 aa-0.16□□□□□ -2.43
SCFD1-218ENST00000556256 AKAP11Q9UKA4 1901 aa-0.16□□□□□ -2.43
SCFD1-218ENST00000556256 G3V318 75 aa-0.16□□□□□ -2.44
SCFD1-218ENST00000556256 UBE2G1P62253 170 aa-0.16□□□□□ -2.44
SCFD1-218ENST00000556256 SCIMPQ6UWF3 145 aa-0.16□□□□□ -2.44
SCFD1-218ENST00000556256 MUC2Q02817 5179 aa-0.16□□□□□ -2.44
SCFD1-218ENST00000556256 KIAA0100Q14667 2235 aaKnown RBP-0.16□□□□□ -2.44
SCFD1-218ENST00000556256 MYCBP2O75592 4640 aa-0.16□□□□□ -2.44
SCFD1-218ENST00000556256 GOLGA3Q08378 1498 aa-0.16□□□□□ -2.44
SCFD1-218ENST00000556256 ZMYM4Q5VZL5 1548 aa-0.17□□□□□ -2.44
SCFD1-218ENST00000556256 FLNCQ14315 2725 aa-0.17□□□□□ -2.44
SCFD1-218ENST00000556256 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.17□□□□□ -2.44
SCFD1-218ENST00000556256 CEP152O94986 1710 aa-0.17□□□□□ -2.44
SCFD1-218ENST00000556256 GCHFRP30047 84 aa-0.17□□□□□ -2.44
SCFD1-218ENST00000556256 Q5VV11 94 aa-0.17□□□□□ -2.44
SCFD1-218ENST00000556256 LZICQ8WZA0 190 aa-0.17□□□□□ -2.44
SCFD1-218ENST00000556256 ANP32BQ92688 251 aaKnown RBP-0.17□□□□□ -2.44
SCFD1-218ENST00000556256 SDF2Q99470 211 aa-0.17□□□□□ -2.44
SCFD1-218ENST00000556256 PLCE1Q9P212 2302 aa-0.17□□□□□ -2.44
SCFD1-218ENST00000556256 SCP2D1Q9UJQ7 156 aa-0.17□□□□□ -2.44
SCFD1-218ENST00000556256 DOPEY2Q9Y3R5 2298 aa-0.17□□□□□ -2.44
SCFD1-218ENST00000556256 ZNF292O60281 2723 aa-0.18□□□□□ -2.44
SCFD1-218ENST00000556256 FAM208BQ5VWN6 2430 aa-0.18□□□□□ -2.44
SCFD1-218ENST00000556256 DAPK1P53355 1430 aa-0.18□□□□□ -2.44
SCFD1-218ENST00000556256 KMT2AQ03164 3969 aa-0.18□□□□□ -2.44
SCFD1-218ENST00000556256 K7ERU9 68 aa-0.18□□□□□ -2.44
SCFD1-218ENST00000556256 IFNA17P01571 189 aa-0.18□□□□□ -2.44
SCFD1-218ENST00000556256 IL5P05113 134 aa-0.18□□□□□ -2.44
SCFD1-218ENST00000556256 RRAS2P62070 204 aaPredicted RBP-0.18□□□□□ -2.44
SCFD1-218ENST00000556256 RPS25P62851 125 aaKnown RBP-0.18□□□□□ -2.44
SCFD1-218ENST00000556256 SMIM21Q3B7S5 101 aa-0.18□□□□□ -2.44
SCFD1-218ENST00000556256 ZNF818PQ6ZRF7 136 aa-0.18□□□□□ -2.44
SCFD1-218ENST00000556256 MAFIPQ8WZ33 124 aa-0.18□□□□□ -2.44
SCFD1-218ENST00000556256 PSMG3Q9BT73 122 aaPredicted RBP-0.18□□□□□ -2.44
SCFD1-218ENST00000556256 COPZ2Q9P299 210 aa-0.18□□□□□ -2.44
SCFD1-218ENST00000556256 PCLOQ9Y6V0 5065 aa-0.18□□□□□ -2.44
SCFD1-218ENST00000556256 CSMD3Q7Z407 3707 aa-0.18□□□□□ -2.44
SCFD1-218ENST00000556256 LRP2P98164 4655 aa-0.19□□□□□ -2.44
SCFD1-218ENST00000556256 MYH13Q9UKX3 1938 aa-0.19□□□□□ -2.44
SCFD1-218ENST00000556256 AKAP6Q13023 2319 aa-0.19□□□□□ -2.44
SCFD1-218ENST00000556256 HSPG2P98160 4391 aa-0.19□□□□□ -2.44
SCFD1-218ENST00000556256 CBLN1P23435 193 aa-0.19□□□□□ -2.44
SCFD1-218ENST00000556256 RPL7L1Q6DKI1 246 aaKnown RBP-0.19□□□□□ -2.44
SCFD1-218ENST00000556256 TSTD1Q8NFU3 115 aa-0.19□□□□□ -2.44
SCFD1-218ENST00000556256 CACNA1AO00555 2505 aa-0.19□□□□□ -2.44
SCFD1-218ENST00000556256 TENM4Q6N022 2769 aa-0.19□□□□□ -2.44
SCFD1-218ENST00000556256 SPTBN2O15020 2390 aa-0.19□□□□□ -2.44
SCFD1-218ENST00000556256 A6NIN4 97 aa-0.2□□□□□ -2.44
SCFD1-218ENST00000556256 APOC4-APOC2K7ER74 178 aa-0.2□□□□□ -2.44
SCFD1-218ENST00000556256 NDUFB6O95139 128 aa-0.2□□□□□ -2.44
SCFD1-218ENST00000556256 PIPP12273 146 aaPredicted RBP-0.2□□□□□ -2.44
SCFD1-218ENST00000556256 GUCA1AP43080 201 aaPredicted RBP-0.2□□□□□ -2.44
SCFD1-218ENST00000556256 SSBP3-AS1Q7Z2R9 100 aa-0.2□□□□□ -2.44
SCFD1-218ENST00000556256 SPTSSAQ969W0 71 aa-0.2□□□□□ -2.44
SCFD1-218ENST00000556256 SIPA1L3O60292 1781 aaPredicted RBP-0.2□□□□□ -2.44
SCFD1-218ENST00000556256 PKD1L1Q8TDX9 2849 aa-0.2□□□□□ -2.44
SCFD1-218ENST00000556256 C2CD3Q4AC94 2353 aa-0.2□□□□□ -2.44
SCFD1-218ENST00000556256 DCHS2Q6V1P9 2916 aa-0.2□□□□□ -2.44
SCFD1-218ENST00000556256 MYH9P35579 1960 aaKnown RBP-0.21□□□□□ -2.44
SCFD1-218ENST00000556256 UNC13AQ9UPW8 1703 aa-0.21□□□□□ -2.44
SCFD1-218ENST00000556256 STAB1Q9NY15 2570 aa-0.21□□□□□ -2.44
SCFD1-218ENST00000556256 TRAV1-2A0A0B4J238 106 aa-0.21□□□□□ -2.44
SCFD1-218ENST00000556256 TRBV10-3A0A0K0K1G6 114 aa-0.21□□□□□ -2.44
SCFD1-218ENST00000556256 ZNF815PA8K554 130 aa-0.21□□□□□ -2.44
SCFD1-218ENST00000556256 COPZ1P61923 177 aa-0.21□□□□□ -2.44
SCFD1-218ENST00000556256 CCL8P80075 99 aa-0.21□□□□□ -2.44
SCFD1-218ENST00000556256 UBE2DNLQ8IWF7 75 aa-0.21□□□□□ -2.44
SCFD1-218ENST00000556256 CYP4F30PQ9H0H9 118 aa-0.21□□□□□ -2.44
SCFD1-218ENST00000556256 FAT2Q9NYQ8 4349 aa-0.21□□□□□ -2.44
SCFD1-218ENST00000556256 PKDREJQ9NTG1 2253 aa-0.21□□□□□ -2.44
SCFD1-218ENST00000556256 ARFGEF1Q9Y6D6 1849 aa-0.22□□□□□ -2.44
SCFD1-218ENST00000556256 LPAP08519 4548 aa-0.22□□□□□ -2.44
SCFD1-218ENST00000556256 TNXBP22105 4242 aa-0.22□□□□□ -2.44
SCFD1-218ENST00000556256 SPTSSBQ8NFR3 76 aa-0.22□□□□□ -2.44
SCFD1-218ENST00000556256 DPH3Q96FX2 82 aa-0.22□□□□□ -2.44
SCFD1-218ENST00000556256 TMEM191AQ9H0A3 160 aa-0.22□□□□□ -2.44
SCFD1-218ENST00000556256 TPT1P8Q9HAU6 139 aa-0.22□□□□□ -2.44
SCFD1-218ENST00000556256 LINC00312Q9Y6C7 94 aa-0.22□□□□□ -2.44
SCFD1-218ENST00000556256 IFT140Q96RY7 1462 aa-0.22□□□□□ -2.45
SCFD1-218ENST00000556256 SPTBN1Q01082 2364 aaKnown RBP-0.23□□□□□ -2.45
SCFD1-218ENST00000556256 PIN1P1O15428 100 aa-0.23□□□□□ -2.45
SCFD1-218ENST00000556256 KCNRGQ8N5I3 272 aa-0.23□□□□□ -2.45
SCFD1-218ENST00000556256 TCEAL4Q96EI5 215 aa-0.23□□□□□ -2.45
SCFD1-218ENST00000556256 MYH6P13533 1939 aa-0.23□□□□□ -2.45
SCFD1-218ENST00000556256 MAP1BP46821 2468 aaKnown RBP-0.23□□□□□ -2.45
SCFD1-218ENST00000556256 FLNAP21333 2647 aaKnown RBP-0.23□□□□□ -2.45
SCFD1-218ENST00000556256 VWFP04275 2813 aa-0.23□□□□□ -2.45
SCFD1-218ENST00000556256 ZANQ9Y493 2812 aa-0.23□□□□□ -2.45
SCFD1-218ENST00000556256 LRRC37A3O60309 1634 aa-0.24□□□□□ -2.45
SCFD1-218ENST00000556256 PARP14Q460N5 1801 aa-0.24□□□□□ -2.45
SCFD1-218ENST00000556256 ALMS1Q8TCU4 4167 aa-0.24□□□□□ -2.45
SCFD1-218ENST00000556256 CHD6Q8TD26 2715 aa-0.24□□□□□ -2.45
SCFD1-218ENST00000556256 SNCGO76070 127 aa-0.24□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms