RNA–Protein interactions for RNA: ENST00000555746.5

SRP54-209, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-209ENST00000555746 SERP1Q9Y6X1 66 aa2.05□□□□□ -2.08
SRP54-209ENST00000555746 DNAH9Q9NYC9 4486 aa2.05□□□□□ -2.08
SRP54-209ENST00000555746 A0A0D9SEW6 157 aa2.04□□□□□ -2.08
SRP54-209ENST00000555746 TRBV27A0A0K0K1C4 114 aa2.04□□□□□ -2.08
SRP54-209ENST00000555746 ZNF860A6NHJ4 632 aa2.04□□□□□ -2.08
SRP54-209ENST00000555746 OOSP1A8MZH6 123 aa2.04□□□□□ -2.08
SRP54-209ENST00000555746 MCRIP1C9JLW8 97 aa2.04□□□□□ -2.08
SRP54-209ENST00000555746 H3BT86 120 aa2.04□□□□□ -2.08
SRP54-209ENST00000555746 TMEM256-PLSCR3K7ERE1 68 aa2.04□□□□□ -2.08
SRP54-209ENST00000555746 RTL8CO15255 209 aa2.04□□□□□ -2.08
SRP54-209ENST00000555746 SYNGR2O43760 224 aa2.04□□□□□ -2.08
SRP54-209ENST00000555746 GABARAPO95166 117 aa2.04□□□□□ -2.08
SRP54-209ENST00000555746 RBP4P02753 201 aa2.04□□□□□ -2.08
SRP54-209ENST00000555746 CD3DP04234 171 aa2.04□□□□□ -2.08
SRP54-209ENST00000555746 CXCL1P09341 107 aa2.04□□□□□ -2.08
SRP54-209ENST00000555746 IGLC2P0DOY2 106 aa2.04□□□□□ -2.08
SRP54-209ENST00000555746 IGLC3P0DOY3 106 aa2.04□□□□□ -2.08
SRP54-209ENST00000555746 ZNF32P17041 273 aa2.04□□□□□ -2.08
SRP54-209ENST00000555746 ZNF80P51504 273 aaPredicted RBP2.04□□□□□ -2.08
SRP54-209ENST00000555746 POLR2JP52435 117 aaKnown RBP2.04□□□□□ -2.08
SRP54-209ENST00000555746 ZNF136P52737 540 aa2.04□□□□□ -2.08
SRP54-209ENST00000555746 SNRPD3P62318 126 aaKnown RBP2.04□□□□□ -2.08
SRP54-209ENST00000555746 RPL23P62829 140 aaKnown RBP2.04□□□□□ -2.08
SRP54-209ENST00000555746 PCP2Q8IVA1 136 aa2.04□□□□□ -2.08
SRP54-209ENST00000555746 DEFB106AQ8N104 65 aa2.04□□□□□ -2.08
SRP54-209ENST00000555746 Q8N976 141 aa2.04□□□□□ -2.08
SRP54-209ENST00000555746 OR8A1Q8NGG7 326 aa2.04□□□□□ -2.08
SRP54-209ENST00000555746 VSTM2AQ8TAG5 236 aa2.04□□□□□ -2.08
SRP54-209ENST00000555746 FAM57AQ8TBR7 257 aa2.04□□□□□ -2.08
SRP54-209ENST00000555746 PRELID3AQ96N28 172 aa2.04□□□□□ -2.08
SRP54-209ENST00000555746 SHANK2-AS3Q9BTD1 123 aa2.04□□□□□ -2.08
SRP54-209ENST00000555746 SLC25A2Q9BXI2 301 aa2.04□□□□□ -2.08
SRP54-209ENST00000555746 MUC2Q02817 5179 aa2.04□□□□□ -2.08
SRP54-209ENST00000555746 SCN3AQ9NY46 2000 aa2.03□□□□□ -2.08
SRP54-209ENST00000555746 KMT2AQ03164 3969 aa2.03□□□□□ -2.08
SRP54-209ENST00000555746 TRGV5A0A0B4J1U4 118 aa2.03□□□□□ -2.08
SRP54-209ENST00000555746 IGKV1D-43A0A0B4J1Z2 117 aa2.03□□□□□ -2.08
SRP54-209ENST00000555746 MUC21A0A0G2JKD1 596 aa2.03□□□□□ -2.08
SRP54-209ENST00000555746 TMEM235A6NFC5 223 aa2.03□□□□□ -2.08
SRP54-209ENST00000555746 H3BRM9 83 aa2.03□□□□□ -2.08
SRP54-209ENST00000555746 PLA2G10O15496 165 aa2.03□□□□□ -2.08
SRP54-209ENST00000555746 SSSCA1O60232 199 aa2.03□□□□□ -2.08
SRP54-209ENST00000555746 SIX6O95475 246 aa2.03□□□□□ -2.08
SRP54-209ENST00000555746 SHBGP04278 402 aa2.03□□□□□ -2.08
SRP54-209ENST00000555746 IGKV3-11P04433 115 aa2.03□□□□□ -2.08
SRP54-209ENST00000555746 HLA-DPB1P04440 258 aa2.03□□□□□ -2.08
SRP54-209ENST00000555746 SLC25A5P05141 298 aaKnown RBP2.03□□□□□ -2.08
SRP54-209ENST00000555746 GYPBP06028 91 aa2.03□□□□□ -2.08
SRP54-209ENST00000555746 TRGC1P0CF51 173 aa2.03□□□□□ -2.08
SRP54-209ENST00000555746 COX7CP15954 63 aa2.03□□□□□ -2.08
SRP54-209ENST00000555746 ADCYAP1P18509 176 aa2.03□□□□□ -2.08
SRP54-209ENST00000555746 CSN1S1P47710 185 aa2.03□□□□□ -2.08
SRP54-209ENST00000555746 DAPP51397 102 aa2.03□□□□□ -2.08
SRP54-209ENST00000555746 DYNLT3P51808 116 aa2.03□□□□□ -2.08
SRP54-209ENST00000555746 YPEL3P61236 119 aaPredicted RBP2.03□□□□□ -2.08
SRP54-209ENST00000555746 NPC2P61916 151 aa2.03□□□□□ -2.08
SRP54-209ENST00000555746 LSM3P62310 102 aaKnown RBP2.03□□□□□ -2.08
SRP54-209ENST00000555746 MRPS36P82909 103 aaKnown RBP2.03□□□□□ -2.08
SRP54-209ENST00000555746 TMEM155Q4W5P6 130 aa2.03□□□□□ -2.08
SRP54-209ENST00000555746 SPRNQ5BIV9 151 aa2.03□□□□□ -2.08
SRP54-209ENST00000555746 DPPA3Q6W0C5 159 aa2.03□□□□□ -2.08
SRP54-209ENST00000555746 TMEM91Q6ZNR0 172 aa2.03□□□□□ -2.08
SRP54-209ENST00000555746 SCXQ7RTU7 201 aa2.03□□□□□ -2.08
SRP54-209ENST00000555746 PHF5AQ7RTV0 110 aaKnown RBP2.03□□□□□ -2.08
SRP54-209ENST00000555746 ZNF101Q8IZC7 436 aa2.03□□□□□ -2.08
SRP54-209ENST00000555746 MORN4Q8NDC4 146 aa2.03□□□□□ -2.08
SRP54-209ENST00000555746 CCL4L1Q8NHW4 92 aa2.03□□□□□ -2.08
SRP54-209ENST00000555746 RNASE6Q93091 150 aaKnown RBP2.03□□□□□ -2.08
SRP54-209ENST00000555746 YPEL2Q96QA6 119 aa2.03□□□□□ -2.08
SRP54-209ENST00000555746 PARP12Q9H0J9 701 aaKnown RBP2.03□□□□□ -2.08
SRP54-209ENST00000555746 C16orf95Q9H693 158 aa2.03□□□□□ -2.08
SRP54-209ENST00000555746 TP73-AS1Q9UF72 201 aa2.03□□□□□ -2.08
SRP54-209ENST00000555746 CACFD1Q9UGQ2 172 aa2.03□□□□□ -2.08
SRP54-209ENST00000555746 SPCS1Q9Y6A9 102 aa2.03□□□□□ -2.08
SRP54-209ENST00000555746 U3KQK5 164 aa2.03□□□□□ -2.08
SRP54-209ENST00000555746 DSCAML1Q8TD84 2053 aa2.03□□□□□ -2.08
SRP54-209ENST00000555746 ANKRD36A6QL64 1941 aa2.03□□□□□ -2.08
SRP54-209ENST00000555746 KIAA1549Q9HCM3 1950 aa2.02□□□□□ -2.09
SRP54-209ENST00000555746 A0A087WWC5 75 aa2.02□□□□□ -2.09
SRP54-209ENST00000555746 A0A1B0GW54 56 aa2.02□□□□□ -2.09
SRP54-209ENST00000555746 LOC107986453A0A1B0GWG9 222 aa2.02□□□□□ -2.09
SRP54-209ENST00000555746 A0A1W2PP18 115 aa2.02□□□□□ -2.09
SRP54-209ENST00000555746 C7orf66A4D0T2 115 aa2.02□□□□□ -2.09
SRP54-209ENST00000555746 C7orf77A4D0Y5 90 aa2.02□□□□□ -2.09
SRP54-209ENST00000555746 GRIFINA4D1Z8 144 aa2.02□□□□□ -2.09
SRP54-209ENST00000555746 HMSDA8MTL9 139 aa2.02□□□□□ -2.09
SRP54-209ENST00000555746 C11orf94C9JXX5 98 aa2.02□□□□□ -2.09
SRP54-209ENST00000555746 YPEL1O60688 119 aa2.02□□□□□ -2.09
SRP54-209ENST00000555746 HYPMO75409 117 aa2.02□□□□□ -2.09
SRP54-209ENST00000555746 LTAP01374 205 aa2.02□□□□□ -2.09
SRP54-209ENST00000555746 IGKV1-5P01602 117 aa2.02□□□□□ -2.09
SRP54-209ENST00000555746 HLA-DQA1P01909 254 aa2.02□□□□□ -2.09
SRP54-209ENST00000555746 PRM2P04554 102 aa2.02□□□□□ -2.09
SRP54-209ENST00000555746 INAFM2P0DMQ5 153 aa2.02□□□□□ -2.09
SRP54-209ENST00000555746 PRB4P10163 310 aaPredicted RBP2.02□□□□□ -2.09
SRP54-209ENST00000555746 CCL20P78556 96 aa2.02□□□□□ -2.09
SRP54-209ENST00000555746 CDK5R1Q15078 307 aa2.02□□□□□ -2.09
SRP54-209ENST00000555746 SPATA45Q537H7 98 aa2.02□□□□□ -2.09
SRP54-209ENST00000555746 ORMDL2Q53FV1 153 aa2.02□□□□□ -2.09
SRP54-209ENST00000555746 ZFP2Q6ZN57 461 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 109.4 ms