RNA–Protein interactions for RNA: ENST00000555648.1

SNX6-205, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-205ENST00000555648 SSBP4Q9BWG4 385 aaPredicted RBP10.2□□□□□ -0.78
SNX6-205ENST00000555648 C1orf43Q9BWL3 253 aa10.2□□□□□ -0.78
SNX6-205ENST00000555648 APOBP04114 4563 aaKnown RBP10.19□□□□□ -0.78
SNX6-205ENST00000555648 TRAV1-1A0A0B4J248 108 aa10.19□□□□□ -0.78
SNX6-205ENST00000555648 XKRY2A2RUG3 117 aa10.19□□□□□ -0.78
SNX6-205ENST00000555648 CCL20P78556 96 aa10.19□□□□□ -0.78
SNX6-205ENST00000555648 CENPWQ5EE01 88 aa10.19□□□□□ -0.78
SNX6-205ENST00000555648 C15orf54Q8N8G6 183 aa10.19□□□□□ -0.78
SNX6-205ENST00000555648 OR2D3Q8NGH3 330 aa10.19□□□□□ -0.78
SNX6-205ENST00000555648 C11orf52Q96A22 123 aa10.19□□□□□ -0.78
SNX6-205ENST00000555648 FAM30AQ9NZY2 134 aa10.19□□□□□ -0.78
SNX6-205ENST00000555648 ANGP03950 147 aaKnown RBP10.18□□□□□ -0.78
SNX6-205ENST00000555648 MGPP08493 103 aa10.18□□□□□ -0.78
SNX6-205ENST00000555648 GNG4P50150 75 aa10.18□□□□□ -0.78
SNX6-205ENST00000555648 C14orf177Q52M58 125 aa10.18□□□□□ -0.78
SNX6-205ENST00000555648 FER1L6-AS1Q8NA97 138 aa10.18□□□□□ -0.78
SNX6-205ENST00000555648 DERL1Q9BUN8 251 aa10.18□□□□□ -0.78
SNX6-205ENST00000555648 BIN3Q9NQY0 253 aa10.18□□□□□ -0.78
SNX6-205ENST00000555648 H7C1H1 209 aa10.17□□□□□ -0.78
SNX6-205ENST00000555648 PDE6DO43924 150 aa10.17□□□□□ -0.78
SNX6-205ENST00000555648 DNAJC30Q96LL9 226 aa10.17□□□□□ -0.78
SNX6-205ENST00000555648 P01737 135 aa10.16□□□□□ -0.78
SNX6-205ENST00000555648 PLA2G1BP04054 148 aaKnown RBP10.16□□□□□ -0.78
SNX6-205ENST00000555648 SULT1A2P50226 295 aa10.16□□□□□ -0.78
SNX6-205ENST00000555648 CACNG7P62955 275 aa10.16□□□□□ -0.78
SNX6-205ENST00000555648 MEF2BQ02080 365 aaPredicted RBP10.16□□□□□ -0.78
SNX6-205ENST00000555648 SMIM12Q96EX1 92 aa10.16□□□□□ -0.78
SNX6-205ENST00000555648 MED9Q9NWA0 146 aa10.16□□□□□ -0.78
SNX6-205ENST00000555648 TRBV25-1A0A075B6N4 114 aa10.15□□□□□ -0.78
SNX6-205ENST00000555648 GZMBP10144 247 aa10.15□□□□□ -0.78
SNX6-205ENST00000555648 MPV17L2Q567V2 206 aa10.15□□□□□ -0.78
SNX6-205ENST00000555648 ATRAIDQ6UW56 229 aa10.15□□□□□ -0.78
SNX6-205ENST00000555648 RAB19A4D1S5 217 aa10.14□□□□□ -0.79
SNX6-205ENST00000555648 F2Z2F3 143 aa10.14□□□□□ -0.79
SNX6-205ENST00000555648 LINC01620Q4KN68 170 aa10.14□□□□□ -0.79
SNX6-205ENST00000555648 HLA-DQA1P01909 254 aa10.13□□□□□ -0.79
SNX6-205ENST00000555648 TRGC1P0CF51 173 aa10.13□□□□□ -0.79
SNX6-205ENST00000555648 BCL2P10415 239 aa10.13□□□□□ -0.79
SNX6-205ENST00000555648 TAGLN2P37802 199 aaKnown RBP10.13□□□□□ -0.79
SNX6-205ENST00000555648 GAGE6Q13070 117 aa10.13□□□□□ -0.79
SNX6-205ENST00000555648 MIAQ16674 131 aa10.13□□□□□ -0.79
SNX6-205ENST00000555648 ENHOQ6UWT2 76 aa10.13□□□□□ -0.79
SNX6-205ENST00000555648 Q6ZSA8 131 aa10.13□□□□□ -0.79
SNX6-205ENST00000555648 SLC51BQ86UW2 128 aa10.13□□□□□ -0.79
SNX6-205ENST00000555648 VAX2Q9UIW0 290 aa10.13□□□□□ -0.79
SNX6-205ENST00000555648 KIF25-AS1Q9Y6Z4 181 aa10.13□□□□□ -0.79
SNX6-205ENST00000555648 IGHV1-24A0A0C4DH33 117 aa10.12□□□□□ -0.79
SNX6-205ENST00000555648 IGLC6P0CF74 106 aa10.12□□□□□ -0.79
SNX6-205ENST00000555648 TCTE3Q8IZS6 198 aa10.12□□□□□ -0.79
SNX6-205ENST00000555648 LINC00528Q8N1L1 170 aa10.12□□□□□ -0.79
SNX6-205ENST00000555648 C19orf71A6NCJ1 209 aa10.11□□□□□ -0.79
SNX6-205ENST00000555648 M0QY20 66 aa10.11□□□□□ -0.79
SNX6-205ENST00000555648 IGLV2-8P01709 118 aa10.11□□□□□ -0.79
SNX6-205ENST00000555648 RBX1P62877 108 aa10.11□□□□□ -0.79
SNX6-205ENST00000555648 J3QL48 77 aa10.1□□□□□ -0.79
SNX6-205ENST00000555648 NKX2-5P52952 324 aaPredicted RBP10.1□□□□□ -0.79
SNX6-205ENST00000555648 SUMO4Q6EEV6 95 aa10.1□□□□□ -0.79
SNX6-205ENST00000555648 RASL11AQ6T310 242 aa10.1□□□□□ -0.79
SNX6-205ENST00000555648 CLPSL2Q6UWE3 100 aa10.1□□□□□ -0.79
SNX6-205ENST00000555648 LYZL1Q6UWQ5 148 aa10.1□□□□□ -0.79
SNX6-205ENST00000555648 NTM-AS1Q6ZSK4 140 aa10.1□□□□□ -0.79
SNX6-205ENST00000555648 USP17L23D6RBM5 183 aa10.09□□□□□ -0.79
SNX6-205ENST00000555648 IQCJQ1A5X6 159 aa10.09□□□□□ -0.79
SNX6-205ENST00000555648 SCXQ7RTU7 201 aa10.09□□□□□ -0.79
SNX6-205ENST00000555648 LINC00269Q8N2A0 174 aa10.09□□□□□ -0.79
SNX6-205ENST00000555648 TMEM243Q9BU79 118 aa10.09□□□□□ -0.79
SNX6-205ENST00000555648 CHAC1Q9BUX1 264 aa10.09□□□□□ -0.79
SNX6-205ENST00000555648 DPH3P1Q9H4G8 78 aa10.09□□□□□ -0.79
SNX6-205ENST00000555648 UBE2L6O14933 153 aa10.08□□□□□ -0.8
SNX6-205ENST00000555648 NTF3P20783 257 aa10.08□□□□□ -0.8
SNX6-205ENST00000555648 TWIST1Q15672 202 aa10.08□□□□□ -0.8
SNX6-205ENST00000555648 SMIM15Q7Z3B0 74 aa10.07□□□□□ -0.8
SNX6-205ENST00000555648 C9orf62Q8N4C0 152 aa10.07□□□□□ -0.8
SNX6-205ENST00000555648 NUDT10Q8NFP7 164 aa10.07□□□□□ -0.8
SNX6-205ENST00000555648 NUDT11Q96G61 164 aa10.07□□□□□ -0.8
SNX6-205ENST00000555648 RPP21Q9H633 154 aaKnown RBP10.07□□□□□ -0.8
SNX6-205ENST00000555648 NIT2Q9NQR4 276 aa10.07□□□□□ -0.8
SNX6-205ENST00000555648 TRBV20OR9-2A0A075B6H5 130 aa10.06□□□□□ -0.8
SNX6-205ENST00000555648 REG3AQ06141 175 aa10.06□□□□□ -0.8
SNX6-205ENST00000555648 COTL1Q14019 142 aa10.06□□□□□ -0.8
SNX6-205ENST00000555648 WDR73Q6P4I2 378 aa10.06□□□□□ -0.8
SNX6-205ENST00000555648 DEFB104AQ8WTQ1 72 aa10.06□□□□□ -0.8
SNX6-205ENST00000555648 PRR34Q9NV39 138 aa10.06□□□□□ -0.8
SNX6-205ENST00000555648 DGAT2L7PQ6IED9 249 aa10.05□□□□□ -0.8
SNX6-205ENST00000555648 AKAP14Q86UN6 197 aa10.05□□□□□ -0.8
SNX6-205ENST00000555648 IGLV10-54A0A075B6I4 117 aa10.04□□□□□ -0.8
SNX6-205ENST00000555648 TRAV8-4A0A0B4J246 113 aa10.04□□□□□ -0.8
SNX6-205ENST00000555648 CTRLP40313 264 aa10.04□□□□□ -0.8
SNX6-205ENST00000555648 AMTP48728 403 aa10.04□□□□□ -0.8
SNX6-205ENST00000555648 BLOC1S1P78537 153 aa10.04□□□□□ -0.8
SNX6-205ENST00000555648 CIRBP-AS1Q8TBR5 109 aa10.04□□□□□ -0.8
SNX6-205ENST00000555648 PGLYRP4Q96LB8 373 aa10.04□□□□□ -0.8
SNX6-205ENST00000555648 RNASE7Q9H1E1 156 aaKnown RBP10.04□□□□□ -0.8
SNX6-205ENST00000555648 PRSS1P07477 247 aa10.03□□□□□ -0.8
SNX6-205ENST00000555648 CLRN3Q8NCR9 226 aa10.03□□□□□ -0.8
SNX6-205ENST00000555648 OCC1Q8TAD7 63 aa10.03□□□□□ -0.8
SNX6-205ENST00000555648 DMBT1Q9UGM3 2413 aaPredicted RBP10.02□□□□□ -0.81
SNX6-205ENST00000555648 A0A1B0GUV1 79 aa10.02□□□□□ -0.81
SNX6-205ENST00000555648 CEBPGP53567 150 aa10.02□□□□□ -0.81
SNX6-205ENST00000555648 C20orf203Q8NBC4 194 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms