RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 ZNRF2Q8NHG8 242 aa9.9□□□□□ -0.82
CHD8-208ENST00000555301 MRAP2Q96G30 205 aa9.9□□□□□ -0.82
CHD8-208ENST00000555301 LINC00694P0DN24 101 aa9.89□□□□□ -0.83
CHD8-208ENST00000555301 UBE2DNLQ8IWF7 75 aa9.89□□□□□ -0.83
CHD8-208ENST00000555301 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.89□□□□□ -0.83
CHD8-208ENST00000555301 ATP6V0E2Q8NHE4 81 aa9.89□□□□□ -0.83
CHD8-208ENST00000555301 RNF185Q96GF1 192 aa9.89□□□□□ -0.83
CHD8-208ENST00000555301 NIT2Q9NQR4 276 aa9.89□□□□□ -0.83
CHD8-208ENST00000555301 Q9UF83 564 aa9.89□□□□□ -0.83
CHD8-208ENST00000555301 TNFRSF18Q9Y5U5 241 aa9.89□□□□□ -0.83
CHD8-208ENST00000555301 TRAV26-2A0A0B4J265 109 aa9.88□□□□□ -0.83
CHD8-208ENST00000555301 TIRAPP58753 221 aa9.88□□□□□ -0.83
CHD8-208ENST00000555301 UBE2D3P61077 147 aa9.88□□□□□ -0.83
CHD8-208ENST00000555301 UBE2D2P62837 147 aa9.88□□□□□ -0.83
CHD8-208ENST00000555301 ESRGQ1W209 222 aa9.88□□□□□ -0.83
CHD8-208ENST00000555301 ATRAIDQ6UW56 229 aa9.88□□□□□ -0.83
CHD8-208ENST00000555301 LYPD5Q6UWN5 251 aa9.88□□□□□ -0.83
CHD8-208ENST00000555301 LINC00476Q8WZB0 136 aa9.88□□□□□ -0.83
CHD8-208ENST00000555301 LY6G6CO95867 125 aa9.87□□□□□ -0.83
CHD8-208ENST00000555301 PPP1R17O96001 155 aa9.87□□□□□ -0.83
CHD8-208ENST00000555301 COX19Q49B96 90 aa9.87□□□□□ -0.83
CHD8-208ENST00000555301 GTSF1LQ9H1H1 148 aa9.87□□□□□ -0.83
CHD8-208ENST00000555301 NACAE9PAV3 2078 aa9.86□□□□□ -0.83
CHD8-208ENST00000555301 MRPL51Q4U2R6 128 aaKnown RBP9.86□□□□□ -0.83
CHD8-208ENST00000555301 DAZ4Q86SG3 579 aaKnown RBP9.86□□□□□ -0.83
CHD8-208ENST00000555301 DAZ3Q9NR90 486 aaKnown RBP9.86□□□□□ -0.83
CHD8-208ENST00000555301 SMCO4Q9NRQ5 59 aa9.86□□□□□ -0.83
CHD8-208ENST00000555301 LINC00588Q9Y4M8 146 aa9.86□□□□□ -0.83
CHD8-208ENST00000555301 LCE6AA0A183 80 aa9.85□□□□□ -0.83
CHD8-208ENST00000555301 PPBPP02775 128 aa9.85□□□□□ -0.83
CHD8-208ENST00000555301 CKS2P33552 79 aa9.85□□□□□ -0.83
CHD8-208ENST00000555301 ELOBQ15370 118 aa9.85□□□□□ -0.83
CHD8-208ENST00000555301 OR10J3Q5JRS4 329 aa9.85□□□□□ -0.83
CHD8-208ENST00000555301 MRPS16Q9Y3D3 137 aaKnown RBP9.85□□□□□ -0.83
CHD8-208ENST00000555301 TRBV24-1A0A075B6N3 115 aa9.84□□□□□ -0.83
CHD8-208ENST00000555301 TRBV6-5A0A0K0K1A5 114 aa9.84□□□□□ -0.83
CHD8-208ENST00000555301 TMEM97Q5BJF2 176 aa9.84□□□□□ -0.83
CHD8-208ENST00000555301 TMEM136Q6ZRR5 245 aa9.84□□□□□ -0.83
CHD8-208ENST00000555301 RPL39LQ96EH5 51 aaKnown RBP9.84□□□□□ -0.83
CHD8-208ENST00000555301 UPK3BQ9BT76 320 aa9.84□□□□□ -0.83
CHD8-208ENST00000555301 GNB1LQ9BYB4 327 aa9.84□□□□□ -0.83
CHD8-208ENST00000555301 NCR2O95944 276 aa9.83□□□□□ -0.84
CHD8-208ENST00000555301 HLA-DQA1P01909 254 aa9.83□□□□□ -0.84
CHD8-208ENST00000555301 MT-ND6P03923 174 aa9.83□□□□□ -0.84
CHD8-208ENST00000555301 LELP1Q5T871 98 aa9.83□□□□□ -0.84
CHD8-208ENST00000555301 ORMDL3Q8N138 153 aa9.83□□□□□ -0.84
CHD8-208ENST00000555301 ST20Q9HBF5 79 aa9.83□□□□□ -0.84
CHD8-208ENST00000555301 TGIF2-C20orf24A0A0A6YYL0 155 aa9.82□□□□□ -0.84
CHD8-208ENST00000555301 TRAV8-6A0A0B4J262 113 aa9.82□□□□□ -0.84
CHD8-208ENST00000555301 IGHV3-38A0A0C4DH36 116 aa9.82□□□□□ -0.84
CHD8-208ENST00000555301 D6R8Y8 96 aa9.82□□□□□ -0.84
CHD8-208ENST00000555301 SMKR1H3BMG3 65 aa9.82□□□□□ -0.84
CHD8-208ENST00000555301 GAS8-AS1O95177 125 aa9.82□□□□□ -0.84
CHD8-208ENST00000555301 CBLN2Q8IUK8 224 aa9.82□□□□□ -0.84
CHD8-208ENST00000555301 SDHAF1A6NFY7 115 aa9.81□□□□□ -0.84
CHD8-208ENST00000555301 PHOX2AO14813 284 aa9.81□□□□□ -0.84
CHD8-208ENST00000555301 APCSP02743 223 aa9.81□□□□□ -0.84
CHD8-208ENST00000555301 S100A1P23297 94 aa9.81□□□□□ -0.84
CHD8-208ENST00000555301 RPS10P46783 165 aaKnown RBP9.81□□□□□ -0.84
CHD8-208ENST00000555301 NRACQ8N912 160 aa9.81□□□□□ -0.84
CHD8-208ENST00000555301 YPEL4Q96NS1 127 aa9.81□□□□□ -0.84
CHD8-208ENST00000555301 TENM2Q9NT68 2774 aa9.8□□□□□ -0.84
CHD8-208ENST00000555301 SUMO2P61956 95 aaKnown RBP9.8□□□□□ -0.84
CHD8-208ENST00000555301 C20orf78Q9BR46 151 aa9.8□□□□□ -0.84
CHD8-208ENST00000555301 Q9H8V8 135 aa9.8□□□□□ -0.84
CHD8-208ENST00000555301 LAMTOR2Q9Y2Q5 125 aa9.8□□□□□ -0.84
CHD8-208ENST00000555301 TRBV6-8A0A0A6YYG3 113 aa9.79□□□□□ -0.84
CHD8-208ENST00000555301 I3L3M4 83 aa9.79□□□□□ -0.84
CHD8-208ENST00000555301 SIVA1O15304 175 aa9.79□□□□□ -0.84
CHD8-208ENST00000555301 TNFRSF6BO95407 300 aa9.79□□□□□ -0.84
CHD8-208ENST00000555301 POLR2KP53803 58 aaKnown RBP9.79□□□□□ -0.84
CHD8-208ENST00000555301 COTL1Q14019 142 aa9.79□□□□□ -0.84
CHD8-208ENST00000555301 PRELID3AQ96N28 172 aa9.79□□□□□ -0.84
CHD8-208ENST00000555301 TMEM70Q9BUB7 260 aa9.79□□□□□ -0.84
CHD8-208ENST00000555301 TRBV25-1A0A075B6N4 114 aa9.78□□□□□ -0.84
CHD8-208ENST00000555301 TRBV27A0A0K0K1C4 114 aa9.78□□□□□ -0.84
CHD8-208ENST00000555301 VCYO14598 125 aa9.78□□□□□ -0.84
CHD8-208ENST00000555301 ATP6V1G1O75348 118 aa9.78□□□□□ -0.84
CHD8-208ENST00000555301 PMCHP20382 165 aa9.78□□□□□ -0.84
CHD8-208ENST00000555301 LYSTQ99698 3801 aa9.78□□□□□ -0.84
CHD8-208ENST00000555301 MRPL18Q9H0U6 180 aaKnown RBP9.78□□□□□ -0.84
CHD8-208ENST00000555301 IGHV1-24A0A0C4DH33 117 aa9.77□□□□□ -0.85
CHD8-208ENST00000555301 NPYP01303 97 aa9.77□□□□□ -0.85
CHD8-208ENST00000555301 RPL32P62910 135 aaKnown RBP9.77□□□□□ -0.85
CHD8-208ENST00000555301 FABP9Q0Z7S8 132 aa9.77□□□□□ -0.85
CHD8-208ENST00000555301 IQCJQ1A5X6 159 aa9.77□□□□□ -0.85
CHD8-208ENST00000555301 WFDC10BQ8IUB3 73 aa9.77□□□□□ -0.85
CHD8-208ENST00000555301 TRAPPC1Q9Y5R8 145 aa9.77□□□□□ -0.85
CHD8-208ENST00000555301 ALMS1Q8TCU4 4167 aa9.77□□□□□ -0.85
CHD8-208ENST00000555301 KIAA1644Q3SXP7 199 aa9.76□□□□□ -0.85
CHD8-208ENST00000555301 NTM-AS1Q6ZSK4 140 aa9.76□□□□□ -0.85
CHD8-208ENST00000555301 KIR2DL4Q99706 377 aa9.76□□□□□ -0.85
CHD8-208ENST00000555301 TRAV9-2A0A087WT02 112 aa9.75□□□□□ -0.85
CHD8-208ENST00000555301 PRSS47A8MTI9 375 aa9.75□□□□□ -0.85
CHD8-208ENST00000555301 K7EP13 123 aa9.75□□□□□ -0.85
CHD8-208ENST00000555301 TCAPO15273 167 aa9.75□□□□□ -0.85
CHD8-208ENST00000555301 DNAH10OSP0CZ25 163 aa9.75□□□□□ -0.85
CHD8-208ENST00000555301 AMTP48728 403 aa9.75□□□□□ -0.85
CHD8-208ENST00000555301 PKIAP61925 76 aa9.75□□□□□ -0.85
CHD8-208ENST00000555301 TTC32Q5I0X7 151 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 101.7 ms