RNA–Protein interactions for RNA: ENST00000555116.5

SHMT2-217, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,885 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-217ENST00000555116 LINC01559Q495D7 138 aa9.91□□□□□ -0.82
SHMT2-217ENST00000555116 PTH2Q96A98 100 aa9.91□□□□□ -0.82
SHMT2-217ENST00000555116 VSIG2Q96IQ7 327 aa9.91□□□□□ -0.82
SHMT2-217ENST00000555116 KMT2AQ03164 3969 aa9.91□□□□□ -0.82
SHMT2-217ENST00000555116 DNAH6Q9C0G6 4158 aa9.91□□□□□ -0.82
SHMT2-217ENST00000555116 A0A0J9YY99 117 aa9.91□□□□□ -0.82
SHMT2-217ENST00000555116 H3BNG1 76 aa9.91□□□□□ -0.82
SHMT2-217ENST00000555116 NUDT3O95989 172 aa9.91□□□□□ -0.82
SHMT2-217ENST00000555116 RIGQ13278 110 aa9.91□□□□□ -0.82
SHMT2-217ENST00000555116 ZNF479Q96JC4 524 aa9.91□□□□□ -0.82
SHMT2-217ENST00000555116 SAMD10Q9BYL1 202 aa9.91□□□□□ -0.82
SHMT2-217ENST00000555116 TMSB15BA0A087X1C1 80 aa9.9□□□□□ -0.82
SHMT2-217ENST00000555116 TRAV4A0A0B4J268 109 aa9.9□□□□□ -0.82
SHMT2-217ENST00000555116 A0A1B0GW15 77 aa9.9□□□□□ -0.82
SHMT2-217ENST00000555116 ASIPP42127 132 aa9.9□□□□□ -0.82
SHMT2-217ENST00000555116 ZNF876PQ49A33 203 aa9.89□□□□□ -0.83
SHMT2-217ENST00000555116 GATD1Q8NB37 220 aa9.89□□□□□ -0.83
SHMT2-217ENST00000555116 S100A4P26447 101 aaKnown RBP9.89□□□□□ -0.83
SHMT2-217ENST00000555116 RPS20P60866 119 aaKnown RBP9.89□□□□□ -0.83
SHMT2-217ENST00000555116 LYZL1Q6UWQ5 148 aa9.89□□□□□ -0.83
SHMT2-217ENST00000555116 TPPP3Q9BW30 176 aa9.89□□□□□ -0.83
SHMT2-217ENST00000555116 PRO0255Q9UI72 69 aa9.89□□□□□ -0.83
SHMT2-217ENST00000555116 H3BVH4 76 aa9.88□□□□□ -0.83
SHMT2-217ENST00000555116 RS1O15537 224 aa9.88□□□□□ -0.83
SHMT2-217ENST00000555116 CRYBA4P53673 196 aa9.88□□□□□ -0.83
SHMT2-217ENST00000555116 OR4C5Q8NGB2 326 aa9.88□□□□□ -0.83
SHMT2-217ENST00000555116 BORCS7Q96B45 105 aa9.88□□□□□ -0.83
SHMT2-217ENST00000555116 TRGV4A0A0C4DH28 118 aa9.87□□□□□ -0.83
SHMT2-217ENST00000555116 PAX4O43316 350 aa9.87□□□□□ -0.83
SHMT2-217ENST00000555116 AMTP48728 403 aa9.87□□□□□ -0.83
SHMT2-217ENST00000555116 UBE2DNLQ8IWF7 75 aa9.87□□□□□ -0.83
SHMT2-217ENST00000555116 HHLA3Q9XRX5 114 aa9.87□□□□□ -0.83
SHMT2-217ENST00000555116 CFAP126Q5VTH2 177 aa9.87□□□□□ -0.83
SHMT2-217ENST00000555116 SCRT2Q9NQ03 307 aa9.87□□□□□ -0.83
SHMT2-217ENST00000555116 A0A096LPF7 62 aa9.86□□□□□ -0.83
SHMT2-217ENST00000555116 IGLC6P0CF74 106 aa9.86□□□□□ -0.83
SHMT2-217ENST00000555116 RAB4AP20338 218 aa9.86□□□□□ -0.83
SHMT2-217ENST00000555116 PMCHP20382 165 aa9.86□□□□□ -0.83
SHMT2-217ENST00000555116 CTRLP40313 264 aa9.86□□□□□ -0.83
SHMT2-217ENST00000555116 PIK3CD-AS1Q5SR53 167 aa9.86□□□□□ -0.83
SHMT2-217ENST00000555116 FER1L6-AS1Q8NA97 138 aa9.86□□□□□ -0.83
SHMT2-217ENST00000555116 EREGO14944 169 aa9.85□□□□□ -0.83
SHMT2-217ENST00000555116 NIT1Q86X76 327 aa9.85□□□□□ -0.83
SHMT2-217ENST00000555116 FAM19A2Q8N3H0 131 aa9.85□□□□□ -0.83
SHMT2-217ENST00000555116 SNHG12Q9BXW3 62 aa9.85□□□□□ -0.83
SHMT2-217ENST00000555116 MED14OSP0DP75 135 aa9.85□□□□□ -0.83
SHMT2-217ENST00000555116 DMRTA1Q5VZB9 504 aa9.85□□□□□ -0.83
SHMT2-217ENST00000555116 URB1-AS1Q96HZ7 61 aa9.85□□□□□ -0.83
SHMT2-217ENST00000555116 LINC00588Q9Y4M8 146 aa9.85□□□□□ -0.83
SHMT2-217ENST00000555116 CIDEAO60543 219 aa9.84□□□□□ -0.83
SHMT2-217ENST00000555116 GATA1P15976 413 aaPredicted RBP9.84□□□□□ -0.83
SHMT2-217ENST00000555116 RNASEKQ6P5S7 137 aaKnown RBP9.84□□□□□ -0.83
SHMT2-217ENST00000555116 ICOSQ9Y6W8 199 aa9.84□□□□□ -0.83
SHMT2-217ENST00000555116 HSBP1O75506 76 aa9.83□□□□□ -0.84
SHMT2-217ENST00000555116 NTF3P20783 257 aa9.83□□□□□ -0.84
SHMT2-217ENST00000555116 CCL18P55774 89 aa9.83□□□□□ -0.84
SHMT2-217ENST00000555116 ESRGQ1W209 222 aa9.83□□□□□ -0.84
SHMT2-217ENST00000555116 TEX43Q6ZNM6 134 aa9.83□□□□□ -0.84
SHMT2-217ENST00000555116 MIEN1Q9BRT3 115 aa9.83□□□□□ -0.84
SHMT2-217ENST00000555116 JPT2Q9H910 190 aa9.83□□□□□ -0.84
SHMT2-217ENST00000555116 PHLDA3Q9Y5J5 127 aa9.83□□□□□ -0.84
SHMT2-217ENST00000555116 IGHV3-73A0A0B4J1V6 119 aa9.83□□□□□ -0.84
SHMT2-217ENST00000555116 MUC21A0A0G2JKD1 596 aa9.83□□□□□ -0.84
SHMT2-217ENST00000555116 MUC21A0A140T8X8 626 aa9.83□□□□□ -0.84
SHMT2-217ENST00000555116 A8MWV9 139 aa9.83□□□□□ -0.84
SHMT2-217ENST00000555116 SYT8Q8NBV8 401 aa9.83□□□□□ -0.84
SHMT2-217ENST00000555116 CNFNQ9BYD5 112 aa9.83□□□□□ -0.84
SHMT2-217ENST00000555116 SNAI2O43623 268 aa9.82□□□□□ -0.84
SHMT2-217ENST00000555116 KRTDAPP60985 99 aa9.82□□□□□ -0.84
SHMT2-217ENST00000555116 MRPL23Q16540 153 aaKnown RBP9.82□□□□□ -0.84
SHMT2-217ENST00000555116 FAM104BQ5XKR9 115 aa9.82□□□□□ -0.84
SHMT2-217ENST00000555116 UFSP1Q6NVU6 142 aa9.82□□□□□ -0.84
SHMT2-217ENST00000555116 VAMP8Q9BV40 100 aa9.82□□□□□ -0.84
SHMT2-217ENST00000555116 K7EQD1 137 aa9.81□□□□□ -0.84
SHMT2-217ENST00000555116 NXPH4O95158 308 aa9.81□□□□□ -0.84
SHMT2-217ENST00000555116 GYPEP15421 78 aa9.81□□□□□ -0.84
SHMT2-217ENST00000555116 TWIST1Q15672 202 aa9.81□□□□□ -0.84
SHMT2-217ENST00000555116 ZFP2Q6ZN57 461 aa9.81□□□□□ -0.84
SHMT2-217ENST00000555116 OR10AG1Q8NH19 301 aa9.81□□□□□ -0.84
SHMT2-217ENST00000555116 ZNRF2Q8NHG8 242 aa9.81□□□□□ -0.84
SHMT2-217ENST00000555116 CHCHD1Q96BP2 118 aaKnown RBP9.81□□□□□ -0.84
SHMT2-217ENST00000555116 LOC100131303A0A0U1RQF7 123 aa9.81□□□□□ -0.84
SHMT2-217ENST00000555116 M0R381 172 aa9.81□□□□□ -0.84
SHMT2-217ENST00000555116 OR5AL1P0C617 328 aa9.81□□□□□ -0.84
SHMT2-217ENST00000555116 LINC00614P0C842 121 aa9.81□□□□□ -0.84
SHMT2-217ENST00000555116 Q6ZSN1 163 aa9.81□□□□□ -0.84
SHMT2-217ENST00000555116 SLC25A29Q8N8R3 303 aa9.81□□□□□ -0.84
SHMT2-217ENST00000555116 IGLV2-18A0A075B6J9 118 aa9.8□□□□□ -0.84
SHMT2-217ENST00000555116 TRBV6-4A0A1B0GX49 114 aa9.8□□□□□ -0.84
SHMT2-217ENST00000555116 C3orf79P0CE67 100 aa9.8□□□□□ -0.84
SHMT2-217ENST00000555116 AMN1Q8IY45 258 aa9.8□□□□□ -0.84
SHMT2-217ENST00000555116 Q8N976 141 aa9.8□□□□□ -0.84
SHMT2-217ENST00000555116 MSRB1Q9NZV6 116 aa9.8□□□□□ -0.84
SHMT2-217ENST00000555116 MRPS16Q9Y3D3 137 aaKnown RBP9.8□□□□□ -0.84
SHMT2-217ENST00000555116 Q6ZR54 194 aa9.79□□□□□ -0.84
SHMT2-217ENST00000555116 UPK3BQ9BT76 320 aa9.79□□□□□ -0.84
SHMT2-217ENST00000555116 TMEM191AQ9H0A3 160 aa9.79□□□□□ -0.84
SHMT2-217ENST00000555116 D6R8Y8 96 aa9.79□□□□□ -0.84
SHMT2-217ENST00000555116 M0R2N4 97 aa9.79□□□□□ -0.84
SHMT2-217ENST00000555116 CRYGDP07320 174 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms