RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 SMCR5Q8TEV8 140 aa11.73□□□□□ -0.53
SYNE3-203ENST00000554873 IGHV3OR16-13A0A075B7E8 117 aa11.73□□□□□ -0.53
SYNE3-203ENST00000554873 IGHV3-74A0A0B4J1X5 117 aa11.73□□□□□ -0.53
SYNE3-203ENST00000554873 OVOL1O14753 267 aa11.73□□□□□ -0.53
SYNE3-203ENST00000554873 CDSNQ15517 529 aa11.73□□□□□ -0.53
SYNE3-203ENST00000554873 CLEC2BQ92478 149 aa11.73□□□□□ -0.53
SYNE3-203ENST00000554873 CEP295Q9C0D2 2601 aa11.72□□□□□ -0.53
SYNE3-203ENST00000554873 ZFP36P26651 326 aaKnown RBP11.72□□□□□ -0.53
SYNE3-203ENST00000554873 FBXL19-AS1Q494R0 122 aa11.72□□□□□ -0.53
SYNE3-203ENST00000554873 C5orf38Q86SI9 138 aa11.72□□□□□ -0.53
SYNE3-203ENST00000554873 GPHB5Q86YW7 130 aa11.72□□□□□ -0.53
SYNE3-203ENST00000554873 PTPRQQ9UMZ3 2332 aa11.72□□□□□ -0.53
SYNE3-203ENST00000554873 CLPSL1A2RUU4 121 aa11.72□□□□□ -0.53
SYNE3-203ENST00000554873 HRNRQ86YZ3 2850 aaPredicted RBP11.72□□□□□ -0.53
SYNE3-203ENST00000554873 TRACP01848 142 aa11.71□□□□□ -0.53
SYNE3-203ENST00000554873 ECSCRQ19T08 205 aa11.71□□□□□ -0.53
SYNE3-203ENST00000554873 MINOS1Q5TGZ0 78 aa11.71□□□□□ -0.53
SYNE3-203ENST00000554873 MINOS1-NBL1R4GNA1 71 aa11.71□□□□□ -0.53
SYNE3-203ENST00000554873 ASH1LQ9NR48 2969 aaKnown RBP11.71□□□□□ -0.53
SYNE3-203ENST00000554873 FAM110DQ8TAY7 271 aaPredicted RBP11.71□□□□□ -0.54
SYNE3-203ENST00000554873 IGHV3-49A0A0A0MS15 119 aa11.7□□□□□ -0.54
SYNE3-203ENST00000554873 RPL39P62891 51 aaKnown RBP11.7□□□□□ -0.54
SYNE3-203ENST00000554873 DPH3Q96FX2 82 aa11.7□□□□□ -0.54
SYNE3-203ENST00000554873 A0A0J9YXY3 114 aa11.7□□□□□ -0.54
SYNE3-203ENST00000554873 hADV29S1A0JD25 119 aa11.7□□□□□ -0.54
SYNE3-203ENST00000554873 SDIM1Q6ZPB5 146 aa11.7□□□□□ -0.54
SYNE3-203ENST00000554873 EEF1AKMT3Q96AZ1 226 aa11.7□□□□□ -0.54
SYNE3-203ENST00000554873 ATOX1O00244 68 aa11.69□□□□□ -0.54
SYNE3-203ENST00000554873 TMEM258P61165 79 aa11.69□□□□□ -0.54
SYNE3-203ENST00000554873 C11orf71Q6IPW1 123 aa11.69□□□□□ -0.54
SYNE3-203ENST00000554873 CLEC19AQ6UXS0 136 aa11.69□□□□□ -0.54
SYNE3-203ENST00000554873 CCL21O00585 134 aa11.69□□□□□ -0.54
SYNE3-203ENST00000554873 CCDC140Q96MF4 163 aa11.69□□□□□ -0.54
SYNE3-203ENST00000554873 TRAV8-3A0A0A6YYJ7 113 aa11.68□□□□□ -0.54
SYNE3-203ENST00000554873 TRAV41A0A0B4J266 112 aa11.68□□□□□ -0.54
SYNE3-203ENST00000554873 ATP6V0E1O15342 81 aa11.68□□□□□ -0.54
SYNE3-203ENST00000554873 DCANP1Q8TF63 244 aa11.68□□□□□ -0.54
SYNE3-203ENST00000554873 G3V318 75 aa11.68□□□□□ -0.54
SYNE3-203ENST00000554873 SPRY2O43597 315 aa11.68□□□□□ -0.54
SYNE3-203ENST00000554873 C9orf47Q6ZRZ4 202 aa11.68□□□□□ -0.54
SYNE3-203ENST00000554873 PHLDA3Q9Y5J5 127 aa11.68□□□□□ -0.54
SYNE3-203ENST00000554873 I3L3M4 83 aa11.68□□□□□ -0.54
SYNE3-203ENST00000554873 S100A4P26447 101 aaKnown RBP11.68□□□□□ -0.54
SYNE3-203ENST00000554873 MRAPQ8TCY5 172 aa11.68□□□□□ -0.54
SYNE3-203ENST00000554873 SPTBN1Q01082 2364 aaKnown RBP11.67□□□□□ -0.54
SYNE3-203ENST00000554873 K7ENP7 123 aa11.67□□□□□ -0.54
SYNE3-203ENST00000554873 HIST1H4AP62805 103 aaKnown RBP11.67□□□□□ -0.54
SYNE3-203ENST00000554873 MRPL53Q96EL3 112 aaKnown RBP11.67□□□□□ -0.54
SYNE3-203ENST00000554873 SIRPDQ9H106 197 aa11.67□□□□□ -0.54
SYNE3-203ENST00000554873 IGHV3-64A0A075B6Q5 118 aa11.67□□□□□ -0.54
SYNE3-203ENST00000554873 PRSS2P07478 247 aa11.67□□□□□ -0.54
SYNE3-203ENST00000554873 KLK9Q2XQG4 91 aa11.67□□□□□ -0.54
SYNE3-203ENST00000554873 LITAFQ99732 161 aa11.67□□□□□ -0.54
SYNE3-203ENST00000554873 KLK9Q9UKQ9 250 aa11.67□□□□□ -0.54
SYNE3-203ENST00000554873 POLR2KP53803 58 aaKnown RBP11.66□□□□□ -0.54
SYNE3-203ENST00000554873 KIR2DL5BQ8NHK3 375 aa11.66□□□□□ -0.54
SYNE3-203ENST00000554873 VCYO14598 125 aa11.66□□□□□ -0.54
SYNE3-203ENST00000554873 PEMTQ9UBM1 199 aa11.66□□□□□ -0.54
SYNE3-203ENST00000554873 IGHV4OR15-8A0A075B7B6 117 aa11.65□□□□□ -0.54
SYNE3-203ENST00000554873 A0A087WW49 117 aa11.65□□□□□ -0.54
SYNE3-203ENST00000554873 C4orf26Q17RF5 130 aa11.65□□□□□ -0.54
SYNE3-203ENST00000554873 PRR9Q5T870 116 aa11.65□□□□□ -0.54
SYNE3-203ENST00000554873 IGHV1-69P01742 117 aa11.64□□□□□ -0.55
SYNE3-203ENST00000554873 MED14OSP0DP75 135 aa11.64□□□□□ -0.55
SYNE3-203ENST00000554873 ADORA2A-AS1P86434 159 aa11.64□□□□□ -0.55
SYNE3-203ENST00000554873 TIMM21Q9BVV7 248 aa11.64□□□□□ -0.55
SYNE3-203ENST00000554873 CYSTM1Q9H1C7 97 aa11.64□□□□□ -0.55
SYNE3-203ENST00000554873 DEFB104AQ8WTQ1 72 aa11.64□□□□□ -0.55
SYNE3-203ENST00000554873 HRCT1Q6UXD1 115 aa11.63□□□□□ -0.55
SYNE3-203ENST00000554873 U3KQE9 123 aa11.63□□□□□ -0.55
SYNE3-203ENST00000554873 MUC6Q6W4X9 2439 aa11.63□□□□□ -0.55
SYNE3-203ENST00000554873 TRBV7-1A0A0A6YYK4 115 aa11.63□□□□□ -0.55
SYNE3-203ENST00000554873 OXTP01178 125 aa11.63□□□□□ -0.55
SYNE3-203ENST00000554873 IGF1P05019 195 aa11.63□□□□□ -0.55
SYNE3-203ENST00000554873 Q5XG85 94 aa11.63□□□□□ -0.55
SYNE3-203ENST00000554873 Q6ZSV7 163 aa11.63□□□□□ -0.55
SYNE3-203ENST00000554873 DUX5Q96PT3 197 aa11.63□□□□□ -0.55
SYNE3-203ENST00000554873 LENEPQ9Y5L5 61 aa11.63□□□□□ -0.55
SYNE3-203ENST00000554873 TMEM61Q8N0U2 210 aa11.62□□□□□ -0.55
SYNE3-203ENST00000554873 SAA4P35542 130 aa11.62□□□□□ -0.55
SYNE3-203ENST00000554873 RHOHQ15669 191 aa11.62□□□□□ -0.55
SYNE3-203ENST00000554873 TRAV21A0A0B4J279 112 aa11.61□□□□□ -0.55
SYNE3-203ENST00000554873 MIAQ16674 131 aa11.61□□□□□ -0.55
SYNE3-203ENST00000554873 ADAMTSL4-AS1Q5T5F5 129 aa11.61□□□□□ -0.55
SYNE3-203ENST00000554873 C16orf92Q96LL3 132 aa11.61□□□□□ -0.55
SYNE3-203ENST00000554873 C20orf173Q96LM9 149 aa11.61□□□□□ -0.55
SYNE3-203ENST00000554873 ZNF580Q9UK33 172 aa11.61□□□□□ -0.55
SYNE3-203ENST00000554873 LINC00315P59091 139 aa11.6□□□□□ -0.55
SYNE3-203ENST00000554873 AKAP6Q13023 2319 aa11.6□□□□□ -0.55
SYNE3-203ENST00000554873 ADARB2-AS1A8MUL3 147 aa11.6□□□□□ -0.55
SYNE3-203ENST00000554873 IGHV3-30-3P0DP02 117 aa11.6□□□□□ -0.55
SYNE3-203ENST00000554873 UCNP55089 124 aa11.6□□□□□ -0.55
SYNE3-203ENST00000554873 DSCR8Q96T75 97 aa11.6□□□□□ -0.55
SYNE3-203ENST00000554873 KIF25-AS1Q9Y6Z4 181 aa11.6□□□□□ -0.55
SYNE3-203ENST00000554873 ATRXP46100 2492 aa11.6□□□□□ -0.55
SYNE3-203ENST00000554873 A0A1W2PPR1 153 aa11.59□□□□□ -0.55
SYNE3-203ENST00000554873 RPL18AQ02543 176 aaKnown RBP11.59□□□□□ -0.55
SYNE3-203ENST00000554873 DAND5Q8N907 189 aa11.59□□□□□ -0.55
SYNE3-203ENST00000554873 OPRPNQ99935 248 aaPredicted RBP11.59□□□□□ -0.55
SYNE3-203ENST00000554873 TRBV27A0A0K0K1C4 114 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms