RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 AKR1C8PQ5T2L2 129 aa3.17□□□□□ -1.9
ATXN3-228ENST00000554592 LINC00242Q5T6M2 205 aa3.17□□□□□ -1.9
ATXN3-228ENST00000554592 SH2D6Q7Z4S9 175 aa3.17□□□□□ -1.9
ATXN3-228ENST00000554592 TMEM252Q8N6L7 170 aa3.17□□□□□ -1.9
ATXN3-228ENST00000554592 C11orf72Q8NBR9 251 aa3.17□□□□□ -1.9
ATXN3-228ENST00000554592 OR2G3Q8NGZ4 309 aa3.17□□□□□ -1.9
ATXN3-228ENST00000554592 CIRBP-AS1Q8TBR5 109 aa3.17□□□□□ -1.9
ATXN3-228ENST00000554592 MBD3L1Q8WWY6 194 aa3.17□□□□□ -1.9
ATXN3-228ENST00000554592 TVP23CQ96ET8 276 aa3.17□□□□□ -1.9
ATXN3-228ENST00000554592 YPEL4Q96NS1 127 aa3.17□□□□□ -1.9
ATXN3-228ENST00000554592 ODF3Q96PU9 254 aa3.17□□□□□ -1.9
ATXN3-228ENST00000554592 ATP5SQ99766 215 aa3.17□□□□□ -1.9
ATXN3-228ENST00000554592 TXNDC17Q9BRA2 123 aa3.17□□□□□ -1.9
ATXN3-228ENST00000554592 SMIM3Q9BZL3 60 aa3.17□□□□□ -1.9
ATXN3-228ENST00000554592 PSENENQ9NZ42 101 aa3.17□□□□□ -1.9
ATXN3-228ENST00000554592 HIGD1AQ9Y241 93 aa3.17□□□□□ -1.9
ATXN3-228ENST00000554592 KLF12Q9Y4X4 402 aa3.17□□□□□ -1.9
ATXN3-228ENST00000554592 TIMM9Q9Y5J7 89 aa3.17□□□□□ -1.9
ATXN3-228ENST00000554592 TRGV4A0A0C4DH28 118 aa3.16□□□□□ -1.9
ATXN3-228ENST00000554592 FAM24AA6NFZ4 105 aa3.16□□□□□ -1.9
ATXN3-228ENST00000554592 C9JQL5 133 aa3.16□□□□□ -1.9
ATXN3-228ENST00000554592 F8WDY8 70 aa3.16□□□□□ -1.9
ATXN3-228ENST00000554592 H3BP45 60 aa3.16□□□□□ -1.9
ATXN3-228ENST00000554592 HMGB3O15347 200 aaKnown RBP3.16□□□□□ -1.9
ATXN3-228ENST00000554592 IGLV2-8P01709 118 aa3.16□□□□□ -1.9
ATXN3-228ENST00000554592 SLC25A5P05141 298 aaKnown RBP3.16□□□□□ -1.9
ATXN3-228ENST00000554592 SRP19P09132 144 aaKnown RBP3.16□□□□□ -1.9
ATXN3-228ENST00000554592 MT1HL1P0DM35 61 aa3.16□□□□□ -1.9
ATXN3-228ENST00000554592 PRB4P10163 310 aaPredicted RBP3.16□□□□□ -1.9
ATXN3-228ENST00000554592 IAPPP10997 89 aa3.16□□□□□ -1.9
ATXN3-228ENST00000554592 ATP6V0CP27449 155 aa3.16□□□□□ -1.9
ATXN3-228ENST00000554592 S100A2P29034 98 aa3.16□□□□□ -1.9
ATXN3-228ENST00000554592 TCL1AP56279 114 aa3.16□□□□□ -1.9
ATXN3-228ENST00000554592 PLP1P60201 277 aa3.16□□□□□ -1.9
ATXN3-228ENST00000554592 LINC01556Q5JQF7 62 aa3.16□□□□□ -1.9
ATXN3-228ENST00000554592 LCE3CQ5T5A8 94 aa3.16□□□□□ -1.9
ATXN3-228ENST00000554592 LCN15Q6UWW0 184 aa3.16□□□□□ -1.9
ATXN3-228ENST00000554592 HSD17B11Q8NBQ5 300 aa3.16□□□□□ -1.9
ATXN3-228ENST00000554592 OR10P1Q8NGE3 313 aa3.16□□□□□ -1.9
ATXN3-228ENST00000554592 OR5C1Q8NGR4 320 aa3.16□□□□□ -1.9
ATXN3-228ENST00000554592 FAM213BQ8TBF2 198 aa3.16□□□□□ -1.9
ATXN3-228ENST00000554592 SCGB1C1Q8TD33 95 aa3.16□□□□□ -1.9
ATXN3-228ENST00000554592 RASL10AQ92737 203 aa3.16□□□□□ -1.9
ATXN3-228ENST00000554592 SLC50A1Q9BRV3 221 aa3.16□□□□□ -1.9
ATXN3-228ENST00000554592 WFDC1Q9HC57 220 aa3.16□□□□□ -1.9
ATXN3-228ENST00000554592 ZNF331Q9NQX6 463 aaPredicted RBP3.16□□□□□ -1.9
ATXN3-228ENST00000554592 KCNIP2Q9NS61 270 aa3.16□□□□□ -1.9
ATXN3-228ENST00000554592 LRP2P98164 4655 aa3.16□□□□□ -1.9
ATXN3-228ENST00000554592 RNF213Q63HN8 5207 aa3.15□□□□□ -1.9
ATXN3-228ENST00000554592 TRBV24-1A0A075B6N3 115 aa3.15□□□□□ -1.91
ATXN3-228ENST00000554592 TRAV8-6A0A0B4J262 113 aa3.15□□□□□ -1.91
ATXN3-228ENST00000554592 UBE2L5PA0A1B0GUS4 154 aa3.15□□□□□ -1.91
ATXN3-228ENST00000554592 C7orf71A4D174 169 aa3.15□□□□□ -1.91
ATXN3-228ENST00000554592 PCP4L1A6NKN8 68 aa3.15□□□□□ -1.91
ATXN3-228ENST00000554592 C17orf112F2Z3M2 114 aa3.15□□□□□ -1.91
ATXN3-228ENST00000554592 TMEM250H0YL14 139 aa3.15□□□□□ -1.91
ATXN3-228ENST00000554592 H3BQ15 152 aa3.15□□□□□ -1.91
ATXN3-228ENST00000554592 AGPAT2O15120 278 aa3.15□□□□□ -1.91
ATXN3-228ENST00000554592 MRPS12O15235 138 aaKnown RBP3.15□□□□□ -1.91
ATXN3-228ENST00000554592 MPDU1O75352 247 aa3.15□□□□□ -1.91
ATXN3-228ENST00000554592 CST7O76096 145 aa3.15□□□□□ -1.91
ATXN3-228ENST00000554592 OR5G3P0C626 314 aa3.15□□□□□ -1.91
ATXN3-228ENST00000554592 METTL15P1P0C7V9 234 aa3.15□□□□□ -1.91
ATXN3-228ENST00000554592 RPL37AP61513 92 aaKnown RBP3.15□□□□□ -1.91
ATXN3-228ENST00000554592 SELENOTP62341 195 aa3.15□□□□□ -1.91
ATXN3-228ENST00000554592 SLC38A11Q08AI6 406 aa3.15□□□□□ -1.91
ATXN3-228ENST00000554592 FABP9Q0Z7S8 132 aa3.15□□□□□ -1.91
ATXN3-228ENST00000554592 SPANXN5Q5MJ07 72 aa3.15□□□□□ -1.91
ATXN3-228ENST00000554592 IBA57Q5T440 356 aaKnown RBP3.15□□□□□ -1.91
ATXN3-228ENST00000554592 TMEM14EPQ6UXP3 125 aa3.15□□□□□ -1.91
ATXN3-228ENST00000554592 CYP2G1PQ6ZSU1 146 aa3.15□□□□□ -1.91
ATXN3-228ENST00000554592 BLNKQ8WV28 456 aa3.15□□□□□ -1.91
ATXN3-228ENST00000554592 MRPL16Q9NX20 251 aaKnown RBP3.15□□□□□ -1.91
ATXN3-228ENST00000554592 VAX2Q9UIW0 290 aa3.15□□□□□ -1.91
ATXN3-228ENST00000554592 PXMP4Q9Y6I8 212 aa3.15□□□□□ -1.91
ATXN3-228ENST00000554592 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.14□□□□□ -1.91
ATXN3-228ENST00000554592 TRAV8-3A0A0A6YYJ7 113 aa3.14□□□□□ -1.91
ATXN3-228ENST00000554592 SMCO3A2RU48 225 aa3.14□□□□□ -1.91
ATXN3-228ENST00000554592 KLLNB2CW77 178 aa3.14□□□□□ -1.91
ATXN3-228ENST00000554592 C9JCJ5 164 aa3.14□□□□□ -1.91
ATXN3-228ENST00000554592 PPP1R2P9O14990 202 aa3.14□□□□□ -1.91
ATXN3-228ENST00000554592 PFN1P07737 140 aaKnown RBP3.14□□□□□ -1.91
ATXN3-228ENST00000554592 SNRPCP09234 159 aaKnown RBP3.14□□□□□ -1.91
ATXN3-228ENST00000554592 LINC00869P0C866 280 aa3.14□□□□□ -1.91
ATXN3-228ENST00000554592 BCL2P10415 239 aa3.14□□□□□ -1.91
ATXN3-228ENST00000554592 RNASE4P34096 147 aaKnown RBP3.14□□□□□ -1.91
ATXN3-228ENST00000554592 RPS10P46783 165 aaKnown RBP3.14□□□□□ -1.91
ATXN3-228ENST00000554592 WFDC2Q14508 124 aa3.14□□□□□ -1.91
ATXN3-228ENST00000554592 LAGE3Q14657 143 aa3.14□□□□□ -1.91
ATXN3-228ENST00000554592 ELOBQ15370 118 aa3.14□□□□□ -1.91
ATXN3-228ENST00000554592 LINC01620Q4KN68 170 aa3.14□□□□□ -1.91
ATXN3-228ENST00000554592 COA6Q5JTJ3 125 aaKnown RBP3.14□□□□□ -1.91
ATXN3-228ENST00000554592 PATE2Q6UY27 113 aa3.14□□□□□ -1.91
ATXN3-228ENST00000554592 Q6ZRU5 148 aa3.14□□□□□ -1.91
ATXN3-228ENST00000554592 BPIFA4PQ86YQ2 179 aa3.14□□□□□ -1.91
ATXN3-228ENST00000554592 Q8N976 141 aa3.14□□□□□ -1.91
ATXN3-228ENST00000554592 LINC00477Q96M19 166 aa3.14□□□□□ -1.91
ATXN3-228ENST00000554592 IMMP2LQ96T52 175 aa3.14□□□□□ -1.91
ATXN3-228ENST00000554592 PAXXQ9BUH6 204 aa3.14□□□□□ -1.91
ATXN3-228ENST00000554592 GGACTQ9BVM4 153 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 195.3 ms