RNA–Protein interactions for RNA: ENST00000554270.5

PTPN21-205, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

TSL 1 (best)

Gene PTPN21, Length 4,008 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-205ENST00000554270 B5MCH6 92 aa8.61□□□□□ -1.03
PTPN21-205ENST00000554270 SPINK8P0C7L1 97 aa8.61□□□□□ -1.03
PTPN21-205ENST00000554270 TNFRSF18Q9Y5U5 241 aa8.61□□□□□ -1.03
PTPN21-205ENST00000554270 PPP1R17O96001 155 aa8.6□□□□□ -1.03
PTPN21-205ENST00000554270 RNASE3P12724 160 aaKnown RBP8.6□□□□□ -1.03
PTPN21-205ENST00000554270 LYRM7Q5U5X0 104 aa8.6□□□□□ -1.03
PTPN21-205ENST00000554270 J3QQQ9 107 aa8.6□□□□□ -1.03
PTPN21-205ENST00000554270 Q8N1Y9 231 aa8.6□□□□□ -1.03
PTPN21-205ENST00000554270 NEXN-AS1Q8NBZ9 246 aa8.6□□□□□ -1.03
PTPN21-205ENST00000554270 PIFOQ8TCI5 191 aa8.6□□□□□ -1.03
PTPN21-205ENST00000554270 CSMD2Q7Z408 3487 aa8.6□□□□□ -1.03
PTPN21-205ENST00000554270 IGHV3-53P01767 116 aa8.6□□□□□ -1.03
PTPN21-205ENST00000554270 DEFB131AP59861 70 aa8.6□□□□□ -1.03
PTPN21-205ENST00000554270 TMEM190Q8WZ59 177 aa8.6□□□□□ -1.03
PTPN21-205ENST00000554270 SPANXB1Q9NS25 103 aaPredicted RBP8.6□□□□□ -1.03
PTPN21-205ENST00000554270 A8MWV9 139 aa8.59□□□□□ -1.03
PTPN21-205ENST00000554270 RNF223E7ERA6 249 aa8.59□□□□□ -1.03
PTPN21-205ENST00000554270 ZNF575Q86XF7 245 aa8.59□□□□□ -1.03
PTPN21-205ENST00000554270 USMG5Q96IX5 58 aa8.59□□□□□ -1.03
PTPN21-205ENST00000554270 ZFHX3Q15911 3703 aa8.59□□□□□ -1.03
PTPN21-205ENST00000554270 DYNLRB2Q8TF09 96 aa8.59□□□□□ -1.03
PTPN21-205ENST00000554270 TEX15Q9BXT5 2789 aa8.59□□□□□ -1.04
PTPN21-205ENST00000554270 PROK1P58294 105 aa8.58□□□□□ -1.04
PTPN21-205ENST00000554270 LINC01587Q99440 93 aa8.58□□□□□ -1.04
PTPN21-205ENST00000554270 GPHB5Q86YW7 130 aa8.58□□□□□ -1.04
PTPN21-205ENST00000554270 DAND5Q8N907 189 aa8.58□□□□□ -1.04
PTPN21-205ENST00000554270 UBE2E2Q96LR5 201 aa8.58□□□□□ -1.04
PTPN21-205ENST00000554270 ZMAT4Q9H898 229 aa8.58□□□□□ -1.04
PTPN21-205ENST00000554270 ERG28Q9UKR5 140 aa8.58□□□□□ -1.04
PTPN21-205ENST00000554270 VPS13CQ709C8 3753 aa8.58□□□□□ -1.04
PTPN21-205ENST00000554270 A4D1N5 150 aa8.58□□□□□ -1.04
PTPN21-205ENST00000554270 B4DSR2 109 aa8.58□□□□□ -1.04
PTPN21-205ENST00000554270 C10orf105Q8TEF2 133 aa8.58□□□□□ -1.04
PTPN21-205ENST00000554270 TTC32Q5I0X7 151 aa8.57□□□□□ -1.04
PTPN21-205ENST00000554270 TRPT1Q86TN4 253 aaKnown RBP8.57□□□□□ -1.04
PTPN21-205ENST00000554270 TRAV8-3A0A0A6YYJ7 113 aa8.57□□□□□ -1.04
PTPN21-205ENST00000554270 TSPAN13O95857 204 aa8.57□□□□□ -1.04
PTPN21-205ENST00000554270 MRPL53Q96EL3 112 aaKnown RBP8.57□□□□□ -1.04
PTPN21-205ENST00000554270 ZNF580Q9UK33 172 aa8.57□□□□□ -1.04
PTPN21-205ENST00000554270 A8MZ25 164 aa8.57□□□□□ -1.04
PTPN21-205ENST00000554270 IGHG2P01859 326 aa8.57□□□□□ -1.04
PTPN21-205ENST00000554270 TAL2Q16559 108 aa8.57□□□□□ -1.04
PTPN21-205ENST00000554270 SRSF2Q01130 221 aaKnown RBP8.56□□□□□ -1.04
PTPN21-205ENST00000554270 PAPPA-AS1Q5QFB9 102 aa8.56□□□□□ -1.04
PTPN21-205ENST00000554270 CHD6Q8TD26 2715 aa8.56□□□□□ -1.04
PTPN21-205ENST00000554270 FBN2P35556 2912 aa8.56□□□□□ -1.04
PTPN21-205ENST00000554270 TRBV7-3A0A075B6L6 115 aa8.56□□□□□ -1.04
PTPN21-205ENST00000554270 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.56□□□□□ -1.04
PTPN21-205ENST00000554270 IGHV1OR15-1A0A075B7D0 117 aa8.56□□□□□ -1.04
PTPN21-205ENST00000554270 IGKV2-29A2NJV5 120 aaPredicted RBP8.56□□□□□ -1.04
PTPN21-205ENST00000554270 NF1P21359 2839 aa8.56□□□□□ -1.04
PTPN21-205ENST00000554270 TRAV12-1A0A0B4J245 112 aa8.56□□□□□ -1.04
PTPN21-205ENST00000554270 COX8CQ7Z4L0 72 aa8.56□□□□□ -1.04
PTPN21-205ENST00000554270 PRO1854Q9UHT4 67 aa8.55□□□□□ -1.04
PTPN21-205ENST00000554270 TCL1BO95988 128 aa8.55□□□□□ -1.04
PTPN21-205ENST00000554270 LENEPQ9Y5L5 61 aa8.55□□□□□ -1.04
PTPN21-205ENST00000554270 MUC4Q99102 2169 aa8.55□□□□□ -1.04
PTPN21-205ENST00000554270 TSPEAR-AS2P59090 65 aa8.55□□□□□ -1.04
PTPN21-205ENST00000554270 TCTEX1D4Q5JR98 221 aa8.55□□□□□ -1.04
PTPN21-205ENST00000554270 MUSTN1Q8IVN3 82 aa8.55□□□□□ -1.04
PTPN21-205ENST00000554270 MORN3Q6PF18 240 aaPredicted RBP8.54□□□□□ -1.04
PTPN21-205ENST00000554270 APRG1Q8IVJ8 170 aa8.54□□□□□ -1.04
PTPN21-205ENST00000554270 XCL2Q9UBD3 114 aa8.54□□□□□ -1.04
PTPN21-205ENST00000554270 FOXI1Q12951 378 aa8.54□□□□□ -1.04
PTPN21-205ENST00000554270 ZNRF2Q8NHG8 242 aa8.54□□□□□ -1.04
PTPN21-205ENST00000554270 U3KQE9 123 aa8.54□□□□□ -1.04
PTPN21-205ENST00000554270 A6NDX4 124 aa8.54□□□□□ -1.04
PTPN21-205ENST00000554270 SLURP1P55000 103 aa8.54□□□□□ -1.04
PTPN21-205ENST00000554270 TIMM21Q9BVV7 248 aa8.54□□□□□ -1.04
PTPN21-205ENST00000554270 A0A0J9YY99 117 aa8.53□□□□□ -1.04
PTPN21-205ENST00000554270 TEX29Q8N6K0 151 aa8.53□□□□□ -1.04
PTPN21-205ENST00000554270 TRBV20-1A0A075B6N2 111 aa8.53□□□□□ -1.04
PTPN21-205ENST00000554270 IGHV4OR15-8A0A075B7B6 117 aa8.53□□□□□ -1.04
PTPN21-205ENST00000554270 A0A087WW49 117 aa8.53□□□□□ -1.04
PTPN21-205ENST00000554270 TRAV13-1A0A0B4J241 112 aa8.53□□□□□ -1.04
PTPN21-205ENST00000554270 MT-ATP8P03928 68 aa8.53□□□□□ -1.04
PTPN21-205ENST00000554270 C18orf65Q6ZTR6 163 aa8.53□□□□□ -1.04
PTPN21-205ENST00000554270 NDUFA11Q86Y39 141 aa8.53□□□□□ -1.04
PTPN21-205ENST00000554270 PSMG3-AS1Q96PY0 264 aa8.53□□□□□ -1.04
PTPN21-205ENST00000554270 MEIG1Q5JSS6 88 aa8.53□□□□□ -1.04
PTPN21-205ENST00000554270 NTN5Q8WTR8 489 aaPredicted RBP8.53□□□□□ -1.04
PTPN21-205ENST00000554270 HOXD3P31249 432 aaPredicted RBP8.52□□□□□ -1.04
PTPN21-205ENST00000554270 C3orf56Q8N813 242 aa8.52□□□□□ -1.04
PTPN21-205ENST00000554270 TOMM7Q9P0U1 55 aa8.52□□□□□ -1.04
PTPN21-205ENST00000554270 SLC25A20O43772 301 aa8.52□□□□□ -1.05
PTPN21-205ENST00000554270 CFHR3Q02985 330 aa8.52□□□□□ -1.05
PTPN21-205ENST00000554270 TRBV7-9A0A0J9YWB2 115 aa8.52□□□□□ -1.05
PTPN21-205ENST00000554270 I3L3M4 83 aa8.51□□□□□ -1.05
PTPN21-205ENST00000554270 CFC1BP0CG36 223 aa8.51□□□□□ -1.05
PTPN21-205ENST00000554270 CFC1P0CG37 223 aa8.51□□□□□ -1.05
PTPN21-205ENST00000554270 ANKRD29Q8N6D5 301 aa8.51□□□□□ -1.05
PTPN21-205ENST00000554270 C1QTNF4Q9BXJ3 329 aa8.51□□□□□ -1.05
PTPN21-205ENST00000554270 CRYGDP07320 174 aa8.51□□□□□ -1.05
PTPN21-205ENST00000554270 FLNAP21333 2647 aaKnown RBP8.51□□□□□ -1.05
PTPN21-205ENST00000554270 TSHBP01222 138 aa8.51□□□□□ -1.05
PTPN21-205ENST00000554270 COX6B1P14854 86 aa8.51□□□□□ -1.05
PTPN21-205ENST00000554270 C10orf126Q8N4M7 172 aa8.51□□□□□ -1.05
PTPN21-205ENST00000554270 TMEM141Q96I45 108 aa8.51□□□□□ -1.05
PTPN21-205ENST00000554270 Q6ZSV7 163 aa8.51□□□□□ -1.05
PTPN21-205ENST00000554270 NDUFA12Q9UI09 145 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms