RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 C9orf62Q8N4C0 152 aa0.94□□□□□ -2.26
SRP54-204ENST00000553923 ZCCHC13Q8WW36 166 aaKnown RBP0.94□□□□□ -2.26
SRP54-204ENST00000553923 CYSTM1Q9H1C7 97 aa0.94□□□□□ -2.26
SRP54-204ENST00000553923 DYNLRB1Q9NP97 96 aa0.94□□□□□ -2.26
SRP54-204ENST00000553923 FAIMQ9NVQ4 179 aa0.94□□□□□ -2.26
SRP54-204ENST00000553923 ABCC5O15440 1437 aa0.94□□□□□ -2.26
SRP54-204ENST00000553923 BAZ1AQ9NRL2 1556 aaPredicted RBP0.94□□□□□ -2.26
SRP54-204ENST00000553923 COL5A3P25940 1745 aaPredicted RBP0.94□□□□□ -2.26
SRP54-204ENST00000553923 ARAP2Q8WZ64 1704 aa0.94□□□□□ -2.26
SRP54-204ENST00000553923 MYH6P13533 1939 aa0.93□□□□□ -2.26
SRP54-204ENST00000553923 MYH13Q9UKX3 1938 aa0.93□□□□□ -2.26
SRP54-204ENST00000553923 ANK1P16157 1881 aa0.93□□□□□ -2.26
SRP54-204ENST00000553923 BCORL1Q5H9F3 1711 aa0.93□□□□□ -2.26
SRP54-204ENST00000553923 VWDEQ8N2E2 1590 aa0.93□□□□□ -2.26
SRP54-204ENST00000553923 CLPSL1A2RUU4 121 aa0.93□□□□□ -2.26
SRP54-204ENST00000553923 IGLC1P0CG04 106 aa0.93□□□□□ -2.26
SRP54-204ENST00000553923 EFNA4P52798 201 aa0.93□□□□□ -2.26
SRP54-204ENST00000553923 TMEM170BQ5T4T1 132 aa0.93□□□□□ -2.26
SRP54-204ENST00000553923 NPVFQ9HCQ7 196 aa0.93□□□□□ -2.26
SRP54-204ENST00000553923 TMEM14BQ9NUH8 114 aa0.93□□□□□ -2.26
SRP54-204ENST00000553923 R4GMQ9 66 aa0.93□□□□□ -2.26
SRP54-204ENST00000553923 V9GYH0 126 aa0.93□□□□□ -2.26
SRP54-204ENST00000553923 ANKRD36BQ8N2N9 1353 aa0.93□□□□□ -2.26
SRP54-204ENST00000553923 STRCP1A6NGW2 1772 aa0.93□□□□□ -2.26
SRP54-204ENST00000553923 PLEKHH2Q8IVE3 1493 aa0.92□□□□□ -2.26
SRP54-204ENST00000553923 TEX14Q8IWB6 1497 aa0.92□□□□□ -2.26
SRP54-204ENST00000553923 FYCO1Q9BQS8 1478 aa0.92□□□□□ -2.26
SRP54-204ENST00000553923 TRPM7Q96QT4 1865 aa0.92□□□□□ -2.26
SRP54-204ENST00000553923 KIAA1549Q9HCM3 1950 aa0.92□□□□□ -2.26
SRP54-204ENST00000553923 ADGRB2O60241 1585 aa0.92□□□□□ -2.26
SRP54-204ENST00000553923 MPDZO75970 2070 aa0.92□□□□□ -2.26
SRP54-204ENST00000553923 ROBO1Q9Y6N7 1651 aa0.92□□□□□ -2.26
SRP54-204ENST00000553923 CEP192Q8TEP8 1941 aa0.92□□□□□ -2.26
SRP54-204ENST00000553923 UQCRHLA0A096LP55 91 aa0.92□□□□□ -2.26
SRP54-204ENST00000553923 TRAV22A0A0B4J277 110 aa0.92□□□□□ -2.26
SRP54-204ENST00000553923 J3QKU1 62 aa0.92□□□□□ -2.26
SRP54-204ENST00000553923 HMGN4O00479 90 aa0.92□□□□□ -2.26
SRP54-204ENST00000553923 NDUFC1O43677 76 aa0.92□□□□□ -2.26
SRP54-204ENST00000553923 SFT2D2O95562 160 aa0.92□□□□□ -2.26
SRP54-204ENST00000553923 COX6CP09669 75 aa0.92□□□□□ -2.26
SRP54-204ENST00000553923 ACYP2P14621 99 aa0.92□□□□□ -2.26
SRP54-204ENST00000553923 ASIPP42127 132 aa0.92□□□□□ -2.26
SRP54-204ENST00000553923 KLKP1Q107X0 134 aa0.92□□□□□ -2.26
SRP54-204ENST00000553923 PEA15Q15121 130 aa0.92□□□□□ -2.26
SRP54-204ENST00000553923 DEFB132Q7Z7B7 95 aa0.92□□□□□ -2.26
SRP54-204ENST00000553923 DEFB119Q8N690 84 aa0.92□□□□□ -2.26
SRP54-204ENST00000553923 Q8N6K4 173 aa0.92□□□□□ -2.26
SRP54-204ENST00000553923 NXT2Q9NPJ8 142 aaKnown RBP0.92□□□□□ -2.26
SRP54-204ENST00000553923 NDUFA4L2Q9NRX3 87 aa0.92□□□□□ -2.26
SRP54-204ENST00000553923 PRO1854Q9UHT4 67 aa0.92□□□□□ -2.26
SRP54-204ENST00000553923 LENEPQ9Y5L5 61 aa0.92□□□□□ -2.26
SRP54-204ENST00000553923 ARL2-SNX15V9GYD0 113 aa0.92□□□□□ -2.26
SRP54-204ENST00000553923 CC2D2AQ9P2K1 1620 aa0.92□□□□□ -2.26
SRP54-204ENST00000553923 RAPGEF2Q9Y4G8 1499 aa0.92□□□□□ -2.26
SRP54-204ENST00000553923 CTTNBP2Q8WZ74 1663 aa0.91□□□□□ -2.26
SRP54-204ENST00000553923 SCN3AQ9NY46 2000 aa0.91□□□□□ -2.26
SRP54-204ENST00000553923 BLMP54132 1417 aaPredicted RBP0.91□□□□□ -2.26
SRP54-204ENST00000553923 TRGV1A0A0A0MS02 117 aa0.91□□□□□ -2.26
SRP54-204ENST00000553923 TRAV1-2A0A0B4J238 106 aa0.91□□□□□ -2.26
SRP54-204ENST00000553923 LOC285095A0A1B0GVY8 99 aa0.91□□□□□ -2.26
SRP54-204ENST00000553923 F2Z2F3 143 aa0.91□□□□□ -2.26
SRP54-204ENST00000553923 CYB5AP00167 134 aa0.91□□□□□ -2.26
SRP54-204ENST00000553923 GYPAP02724 150 aa0.91□□□□□ -2.26
SRP54-204ENST00000553923 LYNX1P0DP58 116 aa0.91□□□□□ -2.26
SRP54-204ENST00000553923 SERP2Q8N6R1 65 aa0.91□□□□□ -2.26
SRP54-204ENST00000553923 CACFD1Q9UGQ2 172 aa0.91□□□□□ -2.26
SRP54-204ENST00000553923 ATG2AQ2TAZ0 1938 aa0.91□□□□□ -2.26
SRP54-204ENST00000553923 ALPK3Q96L96 1907 aa0.91□□□□□ -2.26
SRP54-204ENST00000553923 FBN3Q75N90 2809 aa0.91□□□□□ -2.26
SRP54-204ENST00000553923 TTC37Q6PGP7 1564 aa0.91□□□□□ -2.26
SRP54-204ENST00000553923 PCNX2A6NKB5 2137 aa0.91□□□□□ -2.26
SRP54-204ENST00000553923 FREM3P0C091 2139 aa0.91□□□□□ -2.26
SRP54-204ENST00000553923 MUC22E2RYF6 1773 aaPredicted RBP0.91□□□□□ -2.26
SRP54-204ENST00000553923 SPHKAPQ2M3C7 1700 aa0.9□□□□□ -2.27
SRP54-204ENST00000553923 SIP14410 1827 aa0.9□□□□□ -2.27
SRP54-204ENST00000553923 PTPRFP10586 1907 aa0.9□□□□□ -2.27
SRP54-204ENST00000553923 A0A087WTM6 91 aa0.9□□□□□ -2.27
SRP54-204ENST00000553923 IGLC7A0M8Q6 106 aa0.9□□□□□ -2.27
SRP54-204ENST00000553923 F8VRH5 84 aa0.9□□□□□ -2.27
SRP54-204ENST00000553923 K7EP34 96 aa0.9□□□□□ -2.27
SRP54-204ENST00000553923 M0R135 149 aa0.9□□□□□ -2.27
SRP54-204ENST00000553923 LY6G6CO95867 125 aa0.9□□□□□ -2.27
SRP54-204ENST00000553923 UQCRHP07919 91 aa0.9□□□□□ -2.27
SRP54-204ENST00000553923 KRTAP6-3Q3LI67 103 aa0.9□□□□□ -2.27
SRP54-204ENST00000553923 BAGE3Q86Y29 109 aa0.9□□□□□ -2.27
SRP54-204ENST00000553923 FAM167A-AS1Q96KT0 104 aa0.9□□□□□ -2.27
SRP54-204ENST00000553923 TRGV9Q99603 122 aa0.9□□□□□ -2.27
SRP54-204ENST00000553923 RREB1Q92766 1687 aa0.9□□□□□ -2.27
SRP54-204ENST00000553923 GBF1Q92538 1859 aa0.9□□□□□ -2.27
SRP54-204ENST00000553923 NUMA1Q14980 2115 aa0.89□□□□□ -2.27
SRP54-204ENST00000553923 RP1P56715 2156 aa0.89□□□□□ -2.27
SRP54-204ENST00000553923 BAZ2BQ9UIF8 2168 aaKnown RBP0.89□□□□□ -2.27
SRP54-204ENST00000553923 EML5Q05BV3 1969 aa0.89□□□□□ -2.27
SRP54-204ENST00000553923 RB1CC1Q8TDY2 1594 aa0.89□□□□□ -2.27
SRP54-204ENST00000553923 ADGRL2O95490 1459 aa0.89□□□□□ -2.27
SRP54-204ENST00000553923 MRC1P22897 1456 aa0.89□□□□□ -2.27
SRP54-204ENST00000553923 GAPVD1Q14C86 1478 aa0.89□□□□□ -2.27
SRP54-204ENST00000553923 M0R3E3 92 aa0.89□□□□□ -2.27
SRP54-204ENST00000553923 CCL18P55774 89 aa0.89□□□□□ -2.27
SRP54-204ENST00000553923 UBE2D3P61077 147 aa0.89□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms