RNA–Protein interactions for RNA: ENST00000553686.5

ATXN3-223, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 869 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-223ENST00000553686 PLA2G10O15496 165 aa3.44□□□□□ -1.86
ATXN3-223ENST00000553686 MED6O75586 246 aa3.44□□□□□ -1.86
ATXN3-223ENST00000553686 MT-ND6P03923 174 aa3.44□□□□□ -1.86
ATXN3-223ENST00000553686 GZMBP10144 247 aa3.44□□□□□ -1.86
ATXN3-223ENST00000553686 AP3S2P59780 193 aa3.44□□□□□ -1.86
ATXN3-223ENST00000553686 MRPS10P82664 201 aaKnown RBP3.44□□□□□ -1.86
ATXN3-223ENST00000553686 ZNF266Q14584 549 aa3.44□□□□□ -1.86
ATXN3-223ENST00000553686 SURF2Q15527 256 aaPredicted RBP3.44□□□□□ -1.86
ATXN3-223ENST00000553686 TPRXLQ17RH7 258 aa3.44□□□□□ -1.86
ATXN3-223ENST00000553686 FAM162BQ5T6X4 162 aa3.44□□□□□ -1.86
ATXN3-223ENST00000553686 PRR9Q5T870 116 aa3.44□□□□□ -1.86
ATXN3-223ENST00000553686 KRTAP11-1Q8IUC1 163 aa3.44□□□□□ -1.86
ATXN3-223ENST00000553686 SLC7A5P1Q8MH63 180 aa3.44□□□□□ -1.86
ATXN3-223ENST00000553686 ASB13Q8WXK3 278 aa3.44□□□□□ -1.86
ATXN3-223ENST00000553686 C20orf85Q9H1P6 137 aa3.44□□□□□ -1.86
ATXN3-223ENST00000553686 MCUBQ9NWR8 336 aa3.44□□□□□ -1.86
ATXN3-223ENST00000553686 C14orf166Q9Y224 244 aaKnown RBP3.44□□□□□ -1.86
ATXN3-223ENST00000553686 KCNIP3Q9Y2W7 256 aa3.44□□□□□ -1.86
ATXN3-223ENST00000553686 TIMM9Q9Y5J7 89 aa3.44□□□□□ -1.86
ATXN3-223ENST00000553686 TRAV6A0A075B6T7 132 aa3.43□□□□□ -1.86
ATXN3-223ENST00000553686 LINC00862A6NCI5 91 aa3.43□□□□□ -1.86
ATXN3-223ENST00000553686 GNRH2O43555 120 aa3.43□□□□□ -1.86
ATXN3-223ENST00000553686 COX7A2P2O60397 106 aa3.43□□□□□ -1.86
ATXN3-223ENST00000553686 LINC00694P0DN24 101 aa3.43□□□□□ -1.86
ATXN3-223ENST00000553686 IAPPP10997 89 aa3.43□□□□□ -1.86
ATXN3-223ENST00000553686 IL18Q14116 193 aa3.43□□□□□ -1.86
ATXN3-223ENST00000553686 RNASE10Q5GAN6 216 aaKnown RBP3.43□□□□□ -1.86
ATXN3-223ENST00000553686 Q6AWC8 147 aa3.43□□□□□ -1.86
ATXN3-223ENST00000553686 ZFP2Q6ZN57 461 aa3.43□□□□□ -1.86
ATXN3-223ENST00000553686 LHFPL1Q86WI0 220 aa3.43□□□□□ -1.86
ATXN3-223ENST00000553686 C12orf45Q8N5I9 185 aaPredicted RBP3.43□□□□□ -1.86
ATXN3-223ENST00000553686 OR13C8Q8NGS7 320 aa3.43□□□□□ -1.86
ATXN3-223ENST00000553686 OR2G3Q8NGZ4 309 aa3.43□□□□□ -1.86
ATXN3-223ENST00000553686 KCNS1Q96KK3 526 aa3.43□□□□□ -1.86
ATXN3-223ENST00000553686 MED28Q9H204 178 aa3.43□□□□□ -1.86
ATXN3-223ENST00000553686 NAA60Q9H7X0 242 aa3.43□□□□□ -1.86
ATXN3-223ENST00000553686 COMMD3Q9UBI1 195 aa3.43□□□□□ -1.86
ATXN3-223ENST00000553686 NAGKQ9UJ70 344 aa3.43□□□□□ -1.86
ATXN3-223ENST00000553686 ALG5Q9Y673 324 aa3.43□□□□□ -1.86
ATXN3-223ENST00000553686 TRBV19A0A075B6N1 114 aa3.42□□□□□ -1.86
ATXN3-223ENST00000553686 A0A0B4J2A0 478 aa3.42□□□□□ -1.86
ATXN3-223ENST00000553686 K7EPK0 472 aa3.42□□□□□ -1.86
ATXN3-223ENST00000553686 HPGDSO60760 199 aa3.42□□□□□ -1.86
ATXN3-223ENST00000553686 ANXA3P12429 323 aa3.42□□□□□ -1.86
ATXN3-223ENST00000553686 TBPP20226 339 aa3.42□□□□□ -1.86
ATXN3-223ENST00000553686 SSBP1Q04837 148 aaKnown RBP3.42□□□□□ -1.86
ATXN3-223ENST00000553686 PDE6HQ13956 83 aa3.42□□□□□ -1.86
ATXN3-223ENST00000553686 UBE2NLQ5JXB2 153 aa3.42□□□□□ -1.86
ATXN3-223ENST00000553686 SPANXN5Q5MJ07 72 aa3.42□□□□□ -1.86
ATXN3-223ENST00000553686 C10orf113Q5VZT2 155 aa3.42□□□□□ -1.86
ATXN3-223ENST00000553686 KRTAP26-1Q6PEX3 210 aa3.42□□□□□ -1.86
ATXN3-223ENST00000553686 TOMM5Q8N4H5 51 aa3.42□□□□□ -1.86
ATXN3-223ENST00000553686 OR2T35Q8NGX2 323 aa3.42□□□□□ -1.86
ATXN3-223ENST00000553686 PTH2Q96A98 100 aa3.42□□□□□ -1.86
ATXN3-223ENST00000553686 SAMD10Q9BYL1 202 aa3.42□□□□□ -1.86
ATXN3-223ENST00000553686 NPVFQ9HCQ7 196 aa3.42□□□□□ -1.86
ATXN3-223ENST00000553686 MED9Q9NWA0 146 aa3.42□□□□□ -1.86
ATXN3-223ENST00000553686 EXTL2Q9UBQ6 330 aa3.42□□□□□ -1.86
ATXN3-223ENST00000553686 SHPKQ9UHJ6 478 aa3.42□□□□□ -1.86
ATXN3-223ENST00000553686 SCP2D1Q9UJQ7 156 aa3.42□□□□□ -1.86
ATXN3-223ENST00000553686 CARHSP1Q9Y2V2 147 aaKnown RBP3.42□□□□□ -1.86
ATXN3-223ENST00000553686 STRAPQ9Y3F4 350 aaKnown RBP3.42□□□□□ -1.86
ATXN3-223ENST00000553686 SSPOA2VEC9 5147 aa3.42□□□□□ -1.86
ATXN3-223ENST00000553686 IGKV2-40A0A087WW87 121 aaPredicted RBP3.41□□□□□ -1.86
ATXN3-223ENST00000553686 TRAV8-4A0A0B4J246 113 aa3.41□□□□□ -1.86
ATXN3-223ENST00000553686 H0Y9J4 135 aa3.41□□□□□ -1.86
ATXN3-223ENST00000553686 IGKV2D-40P01614 121 aaPredicted RBP3.41□□□□□ -1.86
ATXN3-223ENST00000553686 P01737 135 aa3.41□□□□□ -1.86
ATXN3-223ENST00000553686 NKX2-5P52952 324 aaPredicted RBP3.41□□□□□ -1.86
ATXN3-223ENST00000553686 RAB14P61106 215 aa3.41□□□□□ -1.86
ATXN3-223ENST00000553686 SCGB2B2Q4G0G5 96 aa3.41□□□□□ -1.86
ATXN3-223ENST00000553686 C1orf137Q5JT78 98 aa3.41□□□□□ -1.86
ATXN3-223ENST00000553686 CLLU1Q5K131 121 aa3.41□□□□□ -1.86
ATXN3-223ENST00000553686 LCE3AQ5TA76 89 aa3.41□□□□□ -1.86
ATXN3-223ENST00000553686 Q6ZRG5 221 aa3.41□□□□□ -1.86
ATXN3-223ENST00000553686 SAMD12Q8N8I0 201 aa3.41□□□□□ -1.86
ATXN3-223ENST00000553686 SUN5Q8TC36 379 aa3.41□□□□□ -1.86
ATXN3-223ENST00000553686 C9orf85Q96MD7 179 aa3.41□□□□□ -1.86
ATXN3-223ENST00000553686 LENEPQ9Y5L5 61 aa3.41□□□□□ -1.86
ATXN3-223ENST00000553686 A0A096LNI7 61 aa3.4□□□□□ -1.87
ATXN3-223ENST00000553686 TRBV6-8A0A0A6YYG3 113 aa3.4□□□□□ -1.87
ATXN3-223ENST00000553686 TRAV21A0A0B4J279 112 aa3.4□□□□□ -1.87
ATXN3-223ENST00000553686 A8MWV9 139 aa3.4□□□□□ -1.87
ATXN3-223ENST00000553686 AGPAT2O15120 278 aa3.4□□□□□ -1.87
ATXN3-223ENST00000553686 SYNGR2O43760 224 aa3.4□□□□□ -1.87
ATXN3-223ENST00000553686 FAUP35544 74 aaKnown RBP3.4□□□□□ -1.87
ATXN3-223ENST00000553686 CSN1S1P47710 185 aa3.4□□□□□ -1.87
ATXN3-223ENST00000553686 FHITP49789 147 aa3.4□□□□□ -1.87
ATXN3-223ENST00000553686 MPV17L2Q567V2 206 aa3.4□□□□□ -1.87
ATXN3-223ENST00000553686 TEX261Q6UWH6 196 aa3.4□□□□□ -1.87
ATXN3-223ENST00000553686 LYZL2Q7Z4W2 148 aa3.4□□□□□ -1.87
ATXN3-223ENST00000553686 LINC00269Q8N2A0 174 aa3.4□□□□□ -1.87
ATXN3-223ENST00000553686 C9orf62Q8N4C0 152 aa3.4□□□□□ -1.87
ATXN3-223ENST00000553686 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.4□□□□□ -1.87
ATXN3-223ENST00000553686 SMIM4Q8WVI0 70 aa3.4□□□□□ -1.87
ATXN3-223ENST00000553686 RTBDNQ9BSG5 229 aaPredicted RBP3.4□□□□□ -1.87
ATXN3-223ENST00000553686 HSPB11Q9Y547 144 aa3.4□□□□□ -1.87
ATXN3-223ENST00000553686 RBAKDNA6NC62 111 aa3.39□□□□□ -1.87
ATXN3-223ENST00000553686 HMSDA8MTL9 139 aa3.39□□□□□ -1.87
ATXN3-223ENST00000553686 FNDC10F2Z333 226 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms