RNA–Protein interactions for RNA: ENST00000553405.1

MTHFD1-204, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-204ENST00000553405 TIRAPP58753 221 aa10.21□□□□□ -0.77
MTHFD1-204ENST00000553405 HBBP68871 147 aa10.21□□□□□ -0.77
MTHFD1-204ENST00000553405 LYPD5Q6UWN5 251 aa10.21□□□□□ -0.77
MTHFD1-204ENST00000553405 NEGR1Q7Z3B1 354 aa10.21□□□□□ -0.77
MTHFD1-204ENST00000553405 AMN1Q8IY45 258 aa10.21□□□□□ -0.77
MTHFD1-204ENST00000553405 TRAV9-1A0A075B6T8 112 aa10.2□□□□□ -0.78
MTHFD1-204ENST00000553405 GAGE12JA6NER3 117 aa10.2□□□□□ -0.78
MTHFD1-204ENST00000553405 F5H697 171 aa10.2□□□□□ -0.78
MTHFD1-204ENST00000553405 SRIP30626 198 aa10.2□□□□□ -0.78
MTHFD1-204ENST00000553405 CAMPP49913 170 aa10.2□□□□□ -0.78
MTHFD1-204ENST00000553405 GAGE1Q13065 139 aa10.2□□□□□ -0.78
MTHFD1-204ENST00000553405 GAGE4Q13068 117 aa10.2□□□□□ -0.78
MTHFD1-204ENST00000553405 GAGE5Q13069 117 aa10.2□□□□□ -0.78
MTHFD1-204ENST00000553405 GAGE13Q4V321 117 aa10.2□□□□□ -0.78
MTHFD1-204ENST00000553405 FAM104BQ5XKR9 115 aa10.2□□□□□ -0.78
MTHFD1-204ENST00000553405 BTF3L4Q96K17 158 aa10.2□□□□□ -0.78
MTHFD1-204ENST00000553405 YPEL4Q96NS1 127 aa10.2□□□□□ -0.78
MTHFD1-204ENST00000553405 RPS10P5Q9NQ39 176 aa10.2□□□□□ -0.78
MTHFD1-204ENST00000553405 FAT2Q9NYQ8 4349 aa10.2□□□□□ -0.78
MTHFD1-204ENST00000553405 TRBV7-3A0A075B6L6 115 aa10.19□□□□□ -0.78
MTHFD1-204ENST00000553405 RASL11AQ6T310 242 aa10.19□□□□□ -0.78
MTHFD1-204ENST00000553405 SMIM15Q7Z3B0 74 aa10.19□□□□□ -0.78
MTHFD1-204ENST00000553405 SH2D6Q7Z4S9 175 aa10.19□□□□□ -0.78
MTHFD1-204ENST00000553405 ZNRF2Q8NHG8 242 aa10.19□□□□□ -0.78
MTHFD1-204ENST00000553405 FRZBQ92765 325 aa10.19□□□□□ -0.78
MTHFD1-204ENST00000553405 UPK3BQ9BT76 320 aa10.19□□□□□ -0.78
MTHFD1-204ENST00000553405 MRPS16Q9Y3D3 137 aaKnown RBP10.19□□□□□ -0.78
MTHFD1-204ENST00000553405 MRPL51Q4U2R6 128 aaKnown RBP10.18□□□□□ -0.78
MTHFD1-204ENST00000553405 H7C1H1 209 aa10.17□□□□□ -0.78
MTHFD1-204ENST00000553405 RPS10P46783 165 aaKnown RBP10.17□□□□□ -0.78
MTHFD1-204ENST00000553405 RPL36AP83881 106 aaKnown RBP10.17□□□□□ -0.78
MTHFD1-204ENST00000553405 NRACQ8N912 160 aa10.17□□□□□ -0.78
MTHFD1-204ENST00000553405 ATP6V0E2Q8NHE4 81 aa10.17□□□□□ -0.78
MTHFD1-204ENST00000553405 RPL36ALQ969Q0 106 aaKnown RBP10.17□□□□□ -0.78
MTHFD1-204ENST00000553405 RPL39LQ96EH5 51 aaKnown RBP10.17□□□□□ -0.78
MTHFD1-204ENST00000553405 DNAJC30Q96LL9 226 aa10.17□□□□□ -0.78
MTHFD1-204ENST00000553405 GTSF1LQ9H1H1 148 aa10.17□□□□□ -0.78
MTHFD1-204ENST00000553405 NIT2Q9NQR4 276 aa10.17□□□□□ -0.78
MTHFD1-204ENST00000553405 URGCP-MRPS24S4R325 110 aa10.17□□□□□ -0.78
MTHFD1-204ENST00000553405 TRBV6-5A0A0K0K1A5 114 aa10.16□□□□□ -0.78
MTHFD1-204ENST00000553405 LY6G6CO95867 125 aa10.16□□□□□ -0.78
MTHFD1-204ENST00000553405 S100A8P05109 93 aa10.16□□□□□ -0.78
MTHFD1-204ENST00000553405 CCL18P55774 89 aa10.16□□□□□ -0.78
MTHFD1-204ENST00000553405 KCNIP4Q6PIL6 250 aa10.16□□□□□ -0.78
MTHFD1-204ENST00000553405 TMEM136Q6ZRR5 245 aa10.16□□□□□ -0.78
MTHFD1-204ENST00000553405 MRAP2Q96G30 205 aa10.16□□□□□ -0.78
MTHFD1-204ENST00000553405 SMKR1H3BMG3 65 aa10.15□□□□□ -0.78
MTHFD1-204ENST00000553405 ELOBQ15370 118 aa10.15□□□□□ -0.78
MTHFD1-204ENST00000553405 NCR2O95944 276 aa10.14□□□□□ -0.79
MTHFD1-204ENST00000553405 NTM-AS1Q6ZSK4 140 aa10.14□□□□□ -0.79
MTHFD1-204ENST00000553405 DNAH11Q96DT5 4516 aa10.14□□□□□ -0.79
MTHFD1-204ENST00000553405 TRBV24-1A0A075B6N3 115 aa10.13□□□□□ -0.79
MTHFD1-204ENST00000553405 IGHV3-38A0A0C4DH36 116 aa10.13□□□□□ -0.79
MTHFD1-204ENST00000553405 S100PP25815 95 aa10.13□□□□□ -0.79
MTHFD1-204ENST00000553405 LELP1Q5T871 98 aa10.13□□□□□ -0.79
MTHFD1-204ENST00000553405 TGIF2-C20orf24A0A0A6YYL0 155 aa10.12□□□□□ -0.79
MTHFD1-204ENST00000553405 POLR2KP53803 58 aaKnown RBP10.12□□□□□ -0.79
MTHFD1-204ENST00000553405 DAZ4Q86SG3 579 aaKnown RBP10.12□□□□□ -0.79
MTHFD1-204ENST00000553405 WFDC10BQ8IUB3 73 aa10.12□□□□□ -0.79
MTHFD1-204ENST00000553405 CBLN2Q8IUK8 224 aa10.12□□□□□ -0.79
MTHFD1-204ENST00000553405 UBE2DNLQ8IWF7 75 aa10.12□□□□□ -0.79
MTHFD1-204ENST00000553405 DAZ3Q9NR90 486 aaKnown RBP10.12□□□□□ -0.79
MTHFD1-204ENST00000553405 TNFRSF18Q9Y5U5 241 aa10.12□□□□□ -0.79
MTHFD1-204ENST00000553405 D6R8Y8 96 aa10.11□□□□□ -0.79
MTHFD1-204ENST00000553405 OR10J3Q5JRS4 329 aa10.11□□□□□ -0.79
MTHFD1-204ENST00000553405 Q6ZR54 194 aa10.11□□□□□ -0.79
MTHFD1-204ENST00000553405 TMEM70Q9BUB7 260 aa10.11□□□□□ -0.79
MTHFD1-204ENST00000553405 GNB1LQ9BYB4 327 aa10.11□□□□□ -0.79
MTHFD1-204ENST00000553405 KRTAP1-5Q9BYS1 174 aa10.11□□□□□ -0.79
MTHFD1-204ENST00000553405 SDHAF1A6NFY7 115 aa10.1□□□□□ -0.79
MTHFD1-204ENST00000553405 Q9H8V8 135 aa10.1□□□□□ -0.79
MTHFD1-204ENST00000553405 TRBV6-8A0A0A6YYG3 113 aa10.09□□□□□ -0.79
MTHFD1-204ENST00000553405 TRBV27A0A0K0K1C4 114 aa10.09□□□□□ -0.79
MTHFD1-204ENST00000553405 NPYP01303 97 aa10.09□□□□□ -0.79
MTHFD1-204ENST00000553405 PPBPP02775 128 aa10.09□□□□□ -0.79
MTHFD1-204ENST00000553405 DNAH10OSP0CZ25 163 aa10.09□□□□□ -0.79
MTHFD1-204ENST00000553405 CKS2P33552 79 aa10.09□□□□□ -0.79
MTHFD1-204ENST00000553405 PHOX2AO14813 284 aa10.08□□□□□ -0.8
MTHFD1-204ENST00000553405 SIVA1O15304 175 aa10.08□□□□□ -0.8
MTHFD1-204ENST00000553405 TNFRSF6BO95407 300 aa10.08□□□□□ -0.8
MTHFD1-204ENST00000553405 HLA-DQA1P01909 254 aa10.08□□□□□ -0.8
MTHFD1-204ENST00000553405 RPL32P62910 135 aaKnown RBP10.08□□□□□ -0.8
MTHFD1-204ENST00000553405 IQCJQ1A5X6 159 aa10.08□□□□□ -0.8
MTHFD1-204ENST00000553405 Q8N3U1 123 aa10.08□□□□□ -0.8
MTHFD1-204ENST00000553405 ST20Q9HBF5 79 aa10.08□□□□□ -0.8
MTHFD1-204ENST00000553405 SMCO4Q9NRQ5 59 aa10.08□□□□□ -0.8
MTHFD1-204ENST00000553405 IGLV2-18A0A075B6J9 118 aa10.07□□□□□ -0.8
MTHFD1-204ENST00000553405 NBDYA0A0U1RRE5 68 aa10.07□□□□□ -0.8
MTHFD1-204ENST00000553405 PPP1R17O96001 155 aa10.07□□□□□ -0.8
MTHFD1-204ENST00000553405 TSHBP01222 138 aa10.07□□□□□ -0.8
MTHFD1-204ENST00000553405 SUMO2P61956 95 aaKnown RBP10.07□□□□□ -0.8
MTHFD1-204ENST00000553405 ORMDL3Q8N138 153 aa10.07□□□□□ -0.8
MTHFD1-204ENST00000553405 C20orf78Q9BR46 151 aa10.07□□□□□ -0.8
MTHFD1-204ENST00000553405 PKD1P98161 4303 aa10.06□□□□□ -0.8
MTHFD1-204ENST00000553405 PRSS47A8MTI9 375 aa10.06□□□□□ -0.8
MTHFD1-204ENST00000553405 COX19Q49B96 90 aa10.06□□□□□ -0.8
MTHFD1-204ENST00000553405 TMEM97Q5BJF2 176 aa10.06□□□□□ -0.8
MTHFD1-204ENST00000553405 LINC01556Q5JQF7 62 aa10.06□□□□□ -0.8
MTHFD1-204ENST00000553405 NIT1Q86X76 327 aa10.06□□□□□ -0.8
MTHFD1-204ENST00000553405 DEFB104AQ8WTQ1 72 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms