RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 PSCAO43653 123 aa10.33□□□□□ -0.76
SHMT2-204ENST00000553324 GATCO43716 136 aaKnown RBP10.33□□□□□ -0.76
SHMT2-204ENST00000553324 DNAJC30Q96LL9 226 aa10.33□□□□□ -0.76
SHMT2-204ENST00000553324 CHCHD7Q9BUK0 85 aa10.33□□□□□ -0.76
SHMT2-204ENST00000553324 TM2D2Q9BX73 214 aa10.33□□□□□ -0.76
SHMT2-204ENST00000553324 CNFNQ9BYD5 112 aa10.33□□□□□ -0.76
SHMT2-204ENST00000553324 ZNF727A8MUV8 499 aa10.32□□□□□ -0.76
SHMT2-204ENST00000553324 A8MWL6 223 aa10.32□□□□□ -0.76
SHMT2-204ENST00000553324 CTRLP40313 264 aa10.32□□□□□ -0.76
SHMT2-204ENST00000553324 ELOBQ15370 118 aa10.32□□□□□ -0.76
SHMT2-204ENST00000553324 TWIST1Q15672 202 aa10.32□□□□□ -0.76
SHMT2-204ENST00000553324 FAM74A3Q4VXF1 159 aa10.32□□□□□ -0.76
SHMT2-204ENST00000553324 DPH3P1Q9H4G8 78 aa10.32□□□□□ -0.76
SHMT2-204ENST00000553324 SMDT1Q9H4I9 107 aa10.32□□□□□ -0.76
SHMT2-204ENST00000553324 A0A087WTM6 91 aa10.31□□□□□ -0.76
SHMT2-204ENST00000553324 A0A087WX48 190 aa10.31□□□□□ -0.76
SHMT2-204ENST00000553324 TRBV6-8A0A0A6YYG3 113 aa10.31□□□□□ -0.76
SHMT2-204ENST00000553324 MGPP08493 103 aa10.31□□□□□ -0.76
SHMT2-204ENST00000553324 SRP19P09132 144 aaKnown RBP10.31□□□□□ -0.76
SHMT2-204ENST00000553324 PKIAP61925 76 aa10.31□□□□□ -0.76
SHMT2-204ENST00000553324 PEA15Q15121 130 aa10.31□□□□□ -0.76
SHMT2-204ENST00000553324 CT83Q5H943 113 aa10.31□□□□□ -0.76
SHMT2-204ENST00000553324 SMIM15Q7Z3B0 74 aa10.31□□□□□ -0.76
SHMT2-204ENST00000553324 NIT1Q86X76 327 aa10.31□□□□□ -0.76
SHMT2-204ENST00000553324 M0QY20 66 aa10.3□□□□□ -0.76
SHMT2-204ENST00000553324 FOXA3P55318 350 aaPredicted RBP10.3□□□□□ -0.76
SHMT2-204ENST00000553324 CDPF1Q6NVV7 123 aa10.3□□□□□ -0.76
SHMT2-204ENST00000553324 LINC01551Q86U37 167 aa10.3□□□□□ -0.76
SHMT2-204ENST00000553324 Q9HAA7 133 aa10.3□□□□□ -0.76
SHMT2-204ENST00000553324 COX11Q9Y6N1 276 aa10.3□□□□□ -0.76
SHMT2-204ENST00000553324 TMEM262E9PQX1 116 aa10.29□□□□□ -0.76
SHMT2-204ENST00000553324 FRZBQ92765 325 aa10.29□□□□□ -0.76
SHMT2-204ENST00000553324 LRP1BQ9NZR2 4599 aa10.29□□□□□ -0.76
SHMT2-204ENST00000553324 FAM231BA6NCW3 169 aa10.28□□□□□ -0.76
SHMT2-204ENST00000553324 KRTAP10-2P60368 255 aa10.28□□□□□ -0.76
SHMT2-204ENST00000553324 TMEM241Q24JQ0 296 aa10.28□□□□□ -0.76
SHMT2-204ENST00000553324 SUMO4Q6EEV6 95 aa10.28□□□□□ -0.76
SHMT2-204ENST00000553324 RASL11AQ6T310 242 aa10.28□□□□□ -0.76
SHMT2-204ENST00000553324 GTSF1Q8WW33 167 aa10.28□□□□□ -0.76
SHMT2-204ENST00000553324 BORCS7Q96B45 105 aa10.28□□□□□ -0.76
SHMT2-204ENST00000553324 RMI2Q96E14 147 aa10.28□□□□□ -0.76
SHMT2-204ENST00000553324 GFRA4Q9GZZ7 299 aa10.28□□□□□ -0.76
SHMT2-204ENST00000553324 OSTCQ9NRP0 149 aa10.28□□□□□ -0.76
SHMT2-204ENST00000553324 KIAA1109Q2LD37 5005 aa10.28□□□□□ -0.76
SHMT2-204ENST00000553324 HERC2O95714 4834 aa10.27□□□□□ -0.77
SHMT2-204ENST00000553324 C15orf54Q8N8G6 183 aa10.27□□□□□ -0.77
SHMT2-204ENST00000553324 NIT2Q9NQR4 276 aa10.27□□□□□ -0.77
SHMT2-204ENST00000553324 TRBV25-1A0A075B6N4 114 aa10.26□□□□□ -0.77
SHMT2-204ENST00000553324 CDK2AP2O75956 126 aa10.26□□□□□ -0.77
SHMT2-204ENST00000553324 Q0VG73 95 aa10.26□□□□□ -0.77
SHMT2-204ENST00000553324 TSKUQ8WUA8 353 aa10.26□□□□□ -0.77
SHMT2-204ENST00000553324 Q8N3U1 123 aa10.25□□□□□ -0.77
SHMT2-204ENST00000553324 PGLYRP4Q96LB8 373 aa10.25□□□□□ -0.77
SHMT2-204ENST00000553324 CHCHD5Q9BSY4 110 aa10.25□□□□□ -0.77
SHMT2-204ENST00000553324 KLK12Q9UKR0 248 aa10.25□□□□□ -0.77
SHMT2-204ENST00000553324 IGHV1-24A0A0C4DH33 117 aa10.24□□□□□ -0.77
SHMT2-204ENST00000553324 LRCOL1A6NCL2 159 aa10.24□□□□□ -0.77
SHMT2-204ENST00000553324 NAT8Q9UHE5 227 aa10.24□□□□□ -0.77
SHMT2-204ENST00000553324 DNAH5Q8TE73 4624 aa10.24□□□□□ -0.77
SHMT2-204ENST00000553324 A0A1B0GUT8 65 aa10.23□□□□□ -0.77
SHMT2-204ENST00000553324 HIGD1CA8MV81 97 aa10.23□□□□□ -0.77
SHMT2-204ENST00000553324 RAB14P61106 215 aa10.23□□□□□ -0.77
SHMT2-204ENST00000553324 IQCJQ1A5X6 159 aa10.23□□□□□ -0.77
SHMT2-204ENST00000553324 NTM-AS1Q6ZSK4 140 aa10.23□□□□□ -0.77
SHMT2-204ENST00000553324 NTN5Q8WTR8 489 aaPredicted RBP10.23□□□□□ -0.77
SHMT2-204ENST00000553324 ISOC2Q96AB3 205 aa10.23□□□□□ -0.77
SHMT2-204ENST00000553324 UBE2WQ96B02 151 aa10.23□□□□□ -0.77
SHMT2-204ENST00000553324 RPL23P62829 140 aaKnown RBP10.22□□□□□ -0.77
SHMT2-204ENST00000553324 C9JQL5 133 aa10.21□□□□□ -0.77
SHMT2-204ENST00000553324 CRPP02741 224 aa10.21□□□□□ -0.77
SHMT2-204ENST00000553324 ADIRFQ15847 76 aa10.21□□□□□ -0.77
SHMT2-204ENST00000553324 Q8N814 137 aa10.21□□□□□ -0.77
SHMT2-204ENST00000553324 GATD1Q8NB37 220 aa10.21□□□□□ -0.77
SHMT2-204ENST00000553324 V9GYV3 84 aa10.21□□□□□ -0.77
SHMT2-204ENST00000553324 IGKV2D-24A0A075B6R9 120 aa10.2□□□□□ -0.78
SHMT2-204ENST00000553324 ANGP03950 147 aaKnown RBP10.2□□□□□ -0.78
SHMT2-204ENST00000553324 SRSF3P84103 164 aaKnown RBP10.2□□□□□ -0.78
SHMT2-204ENST00000553324 RIGQ13278 110 aa10.2□□□□□ -0.78
SHMT2-204ENST00000553324 COTL1Q14019 142 aa10.2□□□□□ -0.78
SHMT2-204ENST00000553324 MPV17L2Q567V2 206 aa10.2□□□□□ -0.78
SHMT2-204ENST00000553324 ATRAIDQ6UW56 229 aa10.2□□□□□ -0.78
SHMT2-204ENST00000553324 TMEM191AQ9H0A3 160 aa10.2□□□□□ -0.78
SHMT2-204ENST00000553324 RYR1P21817 5038 aa10.2□□□□□ -0.78
SHMT2-204ENST00000553324 GCSHP23434 173 aa10.19□□□□□ -0.78
SHMT2-204ENST00000553324 TMEM243Q9BU79 118 aa10.19□□□□□ -0.78
SHMT2-204ENST00000553324 C1orf43Q9BWL3 253 aa10.19□□□□□ -0.78
SHMT2-204ENST00000553324 NAT8BQ9UHF3 227 aa10.19□□□□□ -0.78
SHMT2-204ENST00000553324 IGLV5-52A0A0A0MRZ9 124 aa10.18□□□□□ -0.78
SHMT2-204ENST00000553324 TRAV26-2A0A0B4J265 109 aa10.18□□□□□ -0.78
SHMT2-204ENST00000553324 A0A1B0GUV1 79 aa10.18□□□□□ -0.78
SHMT2-204ENST00000553324 RBX1P62877 108 aa10.18□□□□□ -0.78
SHMT2-204ENST00000553324 GAGE6Q13070 117 aa10.18□□□□□ -0.78
SHMT2-204ENST00000553324 MIAQ16674 131 aa10.18□□□□□ -0.78
SHMT2-204ENST00000553324 Q8N976 141 aa10.18□□□□□ -0.78
SHMT2-204ENST00000553324 NUP35Q8NFH5 326 aa10.18□□□□□ -0.78
SHMT2-204ENST00000553324 HSPG2P98160 4391 aa10.17□□□□□ -0.78
SHMT2-204ENST00000553324 UBE2L6O14933 153 aa10.17□□□□□ -0.78
SHMT2-204ENST00000553324 NCR2O95944 276 aa10.17□□□□□ -0.78
SHMT2-204ENST00000553324 ENHOQ6UWT2 76 aa10.17□□□□□ -0.78
SHMT2-204ENST00000553324 AMTP48728 403 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 108.1 ms