RNA–Protein interactions for RNA: ENST00000552343.1

HCFC2-206, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 992 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-206ENST00000552343 GINS4Q9BRT9 223 aa2.5□□□□□ -2.01
HCFC2-206ENST00000552343 RERGLQ9H628 205 aa2.5□□□□□ -2.01
HCFC2-206ENST00000552343 RPRMQ9NS64 109 aa2.5□□□□□ -2.01
HCFC2-206ENST00000552343 FKBP11Q9NYL4 201 aa2.5□□□□□ -2.01
HCFC2-206ENST00000552343 METTL1Q9UBP6 276 aaKnown RBP2.5□□□□□ -2.01
HCFC2-206ENST00000552343 ZNF443Q9Y2A4 671 aaPredicted RBP2.5□□□□□ -2.01
HCFC2-206ENST00000552343 ANK2Q01484 3957 aa2.5□□□□□ -2.01
HCFC2-206ENST00000552343 IGHV3-73A0A0B4J1V6 119 aa2.49□□□□□ -2.01
HCFC2-206ENST00000552343 C17orf98A8MV24 154 aa2.49□□□□□ -2.01
HCFC2-206ENST00000552343 NPYP01303 97 aa2.49□□□□□ -2.01
HCFC2-206ENST00000552343 TNFP01375 233 aa2.49□□□□□ -2.01
HCFC2-206ENST00000552343 CD3DP04234 171 aa2.49□□□□□ -2.01
HCFC2-206ENST00000552343 SPINK8P0C7L1 97 aa2.49□□□□□ -2.01
HCFC2-206ENST00000552343 DEFA4P12838 97 aa2.49□□□□□ -2.01
HCFC2-206ENST00000552343 RPL28P46779 137 aaKnown RBP2.49□□□□□ -2.01
HCFC2-206ENST00000552343 PABPC1L2AQ5JQF8 200 aa2.49□□□□□ -2.01
HCFC2-206ENST00000552343 NOXRED1Q6NXP6 359 aa2.49□□□□□ -2.01
HCFC2-206ENST00000552343 KCNRGQ8N5I3 272 aa2.49□□□□□ -2.01
HCFC2-206ENST00000552343 SPANXA2-OT1Q8N9U9 137 aa2.49□□□□□ -2.01
HCFC2-206ENST00000552343 RNF5Q99942 180 aa2.49□□□□□ -2.01
HCFC2-206ENST00000552343 SEC11CQ9BY50 192 aa2.49□□□□□ -2.01
HCFC2-206ENST00000552343 Q9H521 79 aa2.49□□□□□ -2.01
HCFC2-206ENST00000552343 TAS2R8Q9NYW2 309 aa2.49□□□□□ -2.01
HCFC2-206ENST00000552343 SCP2D1Q9UJQ7 156 aa2.49□□□□□ -2.01
HCFC2-206ENST00000552343 NCOA6Q14686 2063 aaPredicted RBP2.49□□□□□ -2.01
HCFC2-206ENST00000552343 ZANQ9Y493 2812 aa2.49□□□□□ -2.01
HCFC2-206ENST00000552343 ABCA4P78363 2273 aa2.48□□□□□ -2.01
HCFC2-206ENST00000552343 IGLV3-12A0A075B6K2 115 aa2.48□□□□□ -2.01
HCFC2-206ENST00000552343 TRAV12-2A0A075B6T6 113 aa2.48□□□□□ -2.01
HCFC2-206ENST00000552343 LRCOL1A6NCL2 159 aa2.48□□□□□ -2.01
HCFC2-206ENST00000552343 PRB2P02812 416 aaPredicted RBP2.48□□□□□ -2.01
HCFC2-206ENST00000552343 XCL1P47992 114 aa2.48□□□□□ -2.01
HCFC2-206ENST00000552343 ZNF816Q0VGE8 651 aaPredicted RBP2.48□□□□□ -2.01
HCFC2-206ENST00000552343 CDK5R1Q15078 307 aa2.48□□□□□ -2.01
HCFC2-206ENST00000552343 MRPL54Q6P161 138 aaKnown RBP2.48□□□□□ -2.01
HCFC2-206ENST00000552343 Q6ZUT4 128 aa2.48□□□□□ -2.01
HCFC2-206ENST00000552343 SLC35E3Q7Z769 313 aa2.48□□□□□ -2.01
HCFC2-206ENST00000552343 Q8NDZ9 215 aa2.48□□□□□ -2.01
HCFC2-206ENST00000552343 MUC7Q8TAX7 377 aa2.48□□□□□ -2.01
HCFC2-206ENST00000552343 AQP3Q92482 292 aa2.48□□□□□ -2.01
HCFC2-206ENST00000552343 AGPAT4-IT1Q9H0P7 198 aa2.48□□□□□ -2.01
HCFC2-206ENST00000552343 PRO1933Q9H354 126 aa2.48□□□□□ -2.01
HCFC2-206ENST00000552343 SMDT1Q9H4I9 107 aa2.48□□□□□ -2.01
HCFC2-206ENST00000552343 ASF1BQ9NVP2 202 aa2.48□□□□□ -2.01
HCFC2-206ENST00000552343 TRAPPC1Q9Y5R8 145 aa2.48□□□□□ -2.01
HCFC2-206ENST00000552343 TGP01266 2768 aa2.48□□□□□ -2.01
HCFC2-206ENST00000552343 CACNA1CQ13936 2221 aa2.48□□□□□ -2.01
HCFC2-206ENST00000552343 TRBV20-1A0A075B6N2 111 aa2.47□□□□□ -2.01
HCFC2-206ENST00000552343 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.47□□□□□ -2.01
HCFC2-206ENST00000552343 A0A1W2PQD3 144 aa2.47□□□□□ -2.01
HCFC2-206ENST00000552343 GRIFINA4D1Z8 144 aa2.47□□□□□ -2.01
HCFC2-206ENST00000552343 CRYGAP11844 174 aa2.47□□□□□ -2.01
HCFC2-206ENST00000552343 SLC25A4P12235 298 aa2.47□□□□□ -2.01
HCFC2-206ENST00000552343 KLRD1Q13241 179 aa2.47□□□□□ -2.01
HCFC2-206ENST00000552343 KHDC3LQ587J8 217 aa2.47□□□□□ -2.01
HCFC2-206ENST00000552343 FOXI2Q6ZQN5 318 aa2.47□□□□□ -2.01
HCFC2-206ENST00000552343 Q8N2B8 174 aa2.47□□□□□ -2.01
HCFC2-206ENST00000552343 TTC9CQ8N5M4 171 aa2.47□□□□□ -2.01
HCFC2-206ENST00000552343 FAM216BQ8N7L0 139 aa2.47□□□□□ -2.01
HCFC2-206ENST00000552343 SLC35B3Q9H1N7 401 aa2.47□□□□□ -2.01
HCFC2-206ENST00000552343 CHCHD2Q9Y6H1 151 aaPredicted RBP2.47□□□□□ -2.01
HCFC2-206ENST00000552343 HSPE1-MOB4S4R3N1 261 aa2.47□□□□□ -2.01
HCFC2-206ENST00000552343 V9GYS6 101 aa2.47□□□□□ -2.01
HCFC2-206ENST00000552343 SVEP1Q4LDE5 3571 aa2.47□□□□□ -2.01
HCFC2-206ENST00000552343 HRNRQ86YZ3 2850 aaPredicted RBP2.47□□□□□ -2.01
HCFC2-206ENST00000552343 MEGF8Q7Z7M0 2845 aa2.46□□□□□ -2.01
HCFC2-206ENST00000552343 MUC19Q7Z5P9 8384 aa2.46□□□□□ -2.02
HCFC2-206ENST00000552343 AKAP6Q13023 2319 aa2.46□□□□□ -2.02
HCFC2-206ENST00000552343 CNTRLQ7Z7A1 2325 aa2.46□□□□□ -2.02
HCFC2-206ENST00000552343 SEC16AO15027 2179 aa2.46□□□□□ -2.02
HCFC2-206ENST00000552343 DOCK10Q96BY6 2186 aa2.46□□□□□ -2.02
HCFC2-206ENST00000552343 IGHV3-15A0A0B4J1V0 119 aa2.46□□□□□ -2.02
HCFC2-206ENST00000552343 H3BQ85 93 aa2.46□□□□□ -2.02
HCFC2-206ENST00000552343 GEMIN2O14893 280 aaKnown RBP2.46□□□□□ -2.02
HCFC2-206ENST00000552343 ZNF737O75373 536 aa2.46□□□□□ -2.02
HCFC2-206ENST00000552343 SHBGP04278 402 aa2.46□□□□□ -2.02
HCFC2-206ENST00000552343 CTSDP07339 412 aaPredicted RBP2.46□□□□□ -2.02
HCFC2-206ENST00000552343 IFITM1P13164 125 aa2.46□□□□□ -2.02
HCFC2-206ENST00000552343 ZNF22P17026 224 aaPredicted RBP2.46□□□□□ -2.02
HCFC2-206ENST00000552343 FUSP35637 526 aaKnown RBP eCLIP2.46□□□□□ -2.02
HCFC2-206ENST00000552343 BLCAPP62952 87 aa2.46□□□□□ -2.02
HCFC2-206ENST00000552343 ZNF90Q03938 601 aa2.46□□□□□ -2.02
HCFC2-206ENST00000552343 PYY3Q5JQD4 70 aa2.46□□□□□ -2.02
HCFC2-206ENST00000552343 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.46□□□□□ -2.02
HCFC2-206ENST00000552343 C9orf153Q5TBE3 101 aa2.46□□□□□ -2.02
HCFC2-206ENST00000552343 MIC13Q5XKP0 118 aa2.46□□□□□ -2.02
HCFC2-206ENST00000552343 HMGN2P46Q86SG4 172 aa2.46□□□□□ -2.02
HCFC2-206ENST00000552343 ATOH7Q8N100 152 aa2.46□□□□□ -2.02
HCFC2-206ENST00000552343 LSM10Q969L4 123 aaKnown RBP2.46□□□□□ -2.02
HCFC2-206ENST00000552343 MRPS24Q96EL2 167 aaKnown RBP2.46□□□□□ -2.02
HCFC2-206ENST00000552343 MCEEQ96PE7 176 aa2.46□□□□□ -2.02
HCFC2-206ENST00000552343 RPL26L1Q9UNX3 145 aaKnown RBP2.46□□□□□ -2.02
HCFC2-206ENST00000552343 CCDC88CQ9P219 2028 aa2.46□□□□□ -2.02
HCFC2-206ENST00000552343 ANKRD36A6QL64 1941 aa2.45□□□□□ -2.02
HCFC2-206ENST00000552343 OOSP1A8MZH6 123 aa2.45□□□□□ -2.02
HCFC2-206ENST00000552343 H3BQF6 201 aa2.45□□□□□ -2.02
HCFC2-206ENST00000552343 TIMM17BO60830 172 aa2.45□□□□□ -2.02
HCFC2-206ENST00000552343 MSMBP08118 114 aa2.45□□□□□ -2.02
HCFC2-206ENST00000552343 TPT1P13693 172 aaKnown RBP2.45□□□□□ -2.02
HCFC2-206ENST00000552343 MPV17P39210 176 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms