RNA–Protein interactions for RNA: ENST00000551845.5

PTCH1-225, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 809 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-225ENST00000551845 HIGD1CA8MV81 97 aa7.27□□□□□ -1.25
PTCH1-225ENST00000551845 H7C1H1 209 aa7.27□□□□□ -1.25
PTCH1-225ENST00000551845 MGPP08493 103 aa7.27□□□□□ -1.25
PTCH1-225ENST00000551845 LINC00315P59091 139 aa7.27□□□□□ -1.25
PTCH1-225ENST00000551845 OR10J3Q5JRS4 329 aa7.27□□□□□ -1.25
PTCH1-225ENST00000551845 LELP1Q5T871 98 aa7.27□□□□□ -1.25
PTCH1-225ENST00000551845 C1orf134Q5TEV5 83 aa7.27□□□□□ -1.25
PTCH1-225ENST00000551845 UQCC3Q6UW78 93 aa7.27□□□□□ -1.25
PTCH1-225ENST00000551845 V9GYV3 84 aa7.27□□□□□ -1.25
PTCH1-225ENST00000551845 NACAE9PAV3 2078 aa7.27□□□□□ -1.25
PTCH1-225ENST00000551845 A0A1B0GUT8 65 aa7.26□□□□□ -1.25
PTCH1-225ENST00000551845 K7EP13 123 aa7.26□□□□□ -1.25
PTCH1-225ENST00000551845 LINC00336Q6ZUF6 198 aa7.26□□□□□ -1.25
PTCH1-225ENST00000551845 DNAJC30Q96LL9 226 aa7.26□□□□□ -1.25
PTCH1-225ENST00000551845 NAT8BQ9UHF3 227 aa7.26□□□□□ -1.25
PTCH1-225ENST00000551845 TNFRSF18Q9Y5U5 241 aa7.26□□□□□ -1.25
PTCH1-225ENST00000551845 IGHV3-38A0A0C4DH36 116 aa7.25□□□□□ -1.25
PTCH1-225ENST00000551845 M0QY20 66 aa7.25□□□□□ -1.25
PTCH1-225ENST00000551845 LINC00694P0DN24 101 aa7.25□□□□□ -1.25
PTCH1-225ENST00000551845 BTF3P20290 206 aaKnown RBP7.25□□□□□ -1.25
PTCH1-225ENST00000551845 UBE2D3P61077 147 aa7.25□□□□□ -1.25
PTCH1-225ENST00000551845 UBE2D2P62837 147 aa7.25□□□□□ -1.25
PTCH1-225ENST00000551845 PNRC1Q12796 327 aaPredicted RBP7.25□□□□□ -1.25
PTCH1-225ENST00000551845 RIGQ13278 110 aa7.25□□□□□ -1.25
PTCH1-225ENST00000551845 WFDC10BQ8IUB3 73 aa7.25□□□□□ -1.25
PTCH1-225ENST00000551845 C6orf223Q8N319 242 aa7.25□□□□□ -1.25
PTCH1-225ENST00000551845 NEXN-AS1Q8NBZ9 246 aa7.25□□□□□ -1.25
PTCH1-225ENST00000551845 VPS13DQ5THJ4 4388 aa7.25□□□□□ -1.25
PTCH1-225ENST00000551845 DNAH6Q9C0G6 4158 aa7.24□□□□□ -1.25
PTCH1-225ENST00000551845 PPP1R2P9O14990 202 aa7.24□□□□□ -1.25
PTCH1-225ENST00000551845 DNAH10OSP0CZ25 163 aa7.24□□□□□ -1.25
PTCH1-225ENST00000551845 SUMO4Q6EEV6 95 aa7.24□□□□□ -1.25
PTCH1-225ENST00000551845 RASL11AQ6T310 242 aa7.24□□□□□ -1.25
PTCH1-225ENST00000551845 DAZ4Q86SG3 579 aaKnown RBP7.24□□□□□ -1.25
PTCH1-225ENST00000551845 NUP35Q8NFH5 326 aa7.24□□□□□ -1.25
PTCH1-225ENST00000551845 DAZ3Q9NR90 486 aaKnown RBP7.24□□□□□ -1.25
PTCH1-225ENST00000551845 SMIM27A0A1W2PRY6 76 aa7.23□□□□□ -1.25
PTCH1-225ENST00000551845 TMEM218A2RU14 115 aa7.23□□□□□ -1.25
PTCH1-225ENST00000551845 MT-ND4LP03901 98 aa7.23□□□□□ -1.25
PTCH1-225ENST00000551845 TMEM97Q5BJF2 176 aa7.23□□□□□ -1.25
PTCH1-225ENST00000551845 C10orf126Q8N4M7 172 aa7.23□□□□□ -1.25
PTCH1-225ENST00000551845 FRZBQ92765 325 aa7.23□□□□□ -1.25
PTCH1-225ENST00000551845 KRTAP4-5Q9BYR2 181 aa7.23□□□□□ -1.25
PTCH1-225ENST00000551845 NIT2Q9NQR4 276 aa7.23□□□□□ -1.25
PTCH1-225ENST00000551845 PRSS29PA6NIE9 313 aa7.22□□□□□ -1.25
PTCH1-225ENST00000551845 F8W036 122 aa7.22□□□□□ -1.25
PTCH1-225ENST00000551845 RTL8CO15255 209 aa7.22□□□□□ -1.25
PTCH1-225ENST00000551845 LINC01556Q5JQF7 62 aa7.22□□□□□ -1.25
PTCH1-225ENST00000551845 ANAPC16Q96DE5 110 aa7.22□□□□□ -1.25
PTCH1-225ENST00000551845 TMEM191AQ9H0A3 160 aa7.22□□□□□ -1.25
PTCH1-225ENST00000551845 ABCA13Q86UQ4 5058 aa7.21□□□□□ -1.26
PTCH1-225ENST00000551845 TRBV6-8A0A0A6YYG3 113 aa7.21□□□□□ -1.26
PTCH1-225ENST00000551845 A0A1B0GVY2 172 aa7.21□□□□□ -1.26
PTCH1-225ENST00000551845 TMEM262E9PQX1 116 aa7.21□□□□□ -1.26
PTCH1-225ENST00000551845 KCNIP4Q6PIL6 250 aa7.21□□□□□ -1.26
PTCH1-225ENST00000551845 NFE4Q86UQ8 179 aa7.21□□□□□ -1.26
PTCH1-225ENST00000551845 COMMD7Q86VX2 200 aa7.21□□□□□ -1.26
PTCH1-225ENST00000551845 GATD1Q8NB37 220 aa7.21□□□□□ -1.26
PTCH1-225ENST00000551845 KRTAP1-5Q9BYS1 174 aa7.21□□□□□ -1.26
PTCH1-225ENST00000551845 URGCP-MRPS24S4R325 110 aa7.21□□□□□ -1.26
PTCH1-225ENST00000551845 A0A1B0GW15 77 aa7.2□□□□□ -1.26
PTCH1-225ENST00000551845 LINC00862A6NCI5 91 aa7.2□□□□□ -1.26
PTCH1-225ENST00000551845 IGHV3-30P01768 117 aa7.2□□□□□ -1.26
PTCH1-225ENST00000551845 IGHV3-33P01772 117 aa7.2□□□□□ -1.26
PTCH1-225ENST00000551845 S100A8P05109 93 aa7.2□□□□□ -1.26
PTCH1-225ENST00000551845 IGHV3-30-3P0DP02 117 aa7.2□□□□□ -1.26
PTCH1-225ENST00000551845 IGHV3-30-5P0DP03 117 aa7.2□□□□□ -1.26
PTCH1-225ENST00000551845 RAB4AP20338 218 aa7.2□□□□□ -1.26
PTCH1-225ENST00000551845 SEC11CQ9BY50 192 aa7.2□□□□□ -1.26
PTCH1-225ENST00000551845 DYNC1H1Q14204 4646 aaKnown RBP7.2□□□□□ -1.26
PTCH1-225ENST00000551845 A0A087WX48 190 aa7.19□□□□□ -1.26
PTCH1-225ENST00000551845 TRAV26-2A0A0B4J265 109 aa7.19□□□□□ -1.26
PTCH1-225ENST00000551845 CAMPP49913 170 aa7.19□□□□□ -1.26
PTCH1-225ENST00000551845 NIT1Q86X76 327 aa7.19□□□□□ -1.26
PTCH1-225ENST00000551845 TRBV25-1A0A075B6N4 114 aa7.18□□□□□ -1.26
PTCH1-225ENST00000551845 IBA57-AS1B1ANH7 110 aa7.18□□□□□ -1.26
PTCH1-225ENST00000551845 PPP1R17O96001 155 aa7.18□□□□□ -1.26
PTCH1-225ENST00000551845 PKIAP61925 76 aa7.18□□□□□ -1.26
PTCH1-225ENST00000551845 ELOBQ15370 118 aa7.18□□□□□ -1.26
PTCH1-225ENST00000551845 AMN1Q8IY45 258 aa7.18□□□□□ -1.26
PTCH1-225ENST00000551845 MRAP2Q96G30 205 aa7.18□□□□□ -1.26
PTCH1-225ENST00000551845 RNF185Q96GF1 192 aa7.18□□□□□ -1.26
PTCH1-225ENST00000551845 CHCHD5Q9BSY4 110 aa7.18□□□□□ -1.26
PTCH1-225ENST00000551845 CHCHD7Q9BUK0 85 aa7.18□□□□□ -1.26
PTCH1-225ENST00000551845 FAT2Q9NYQ8 4349 aa7.17□□□□□ -1.26
PTCH1-225ENST00000551845 DNAH17Q9UFH2 4485 aa7.17□□□□□ -1.26
PTCH1-225ENST00000551845 IGHV1-24A0A0C4DH33 117 aa7.17□□□□□ -1.26
PTCH1-225ENST00000551845 ADCYAP1P18509 176 aa7.17□□□□□ -1.26
PTCH1-225ENST00000551845 FAM104BQ5XKR9 115 aa7.17□□□□□ -1.26
PTCH1-225ENST00000551845 MRPL54Q6P161 138 aaKnown RBP7.17□□□□□ -1.26
PTCH1-225ENST00000551845 NTM-AS1Q6ZSK4 140 aa7.17□□□□□ -1.26
PTCH1-225ENST00000551845 RPL39LQ96EH5 51 aaKnown RBP7.17□□□□□ -1.26
PTCH1-225ENST00000551845 CTDSP1Q9GZU7 261 aa7.17□□□□□ -1.26
PTCH1-225ENST00000551845 PKHD1P08F94 4074 aa7.17□□□□□ -1.26
PTCH1-225ENST00000551845 TRAV8-3A0A0A6YYJ7 113 aa7.16□□□□□ -1.26
PTCH1-225ENST00000551845 TRBV6-5A0A0K0K1A5 114 aa7.16□□□□□ -1.26
PTCH1-225ENST00000551845 PMCHP20382 165 aa7.16□□□□□ -1.26
PTCH1-225ENST00000551845 HBBP68871 147 aa7.16□□□□□ -1.26
PTCH1-225ENST00000551845 COTL1Q14019 142 aa7.16□□□□□ -1.26
PTCH1-225ENST00000551845 IQCJQ1A5X6 159 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms