RNA–Protein interactions for RNA: ENST00000551544.5

CACNB3-219, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 2,825 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-219ENST00000551544 ODF3Q96PU9 254 aa9.65□□□□□ -0.86
CACNB3-219ENST00000551544 HOXD3P31249 432 aaPredicted RBP9.65□□□□□ -0.86
CACNB3-219ENST00000551544 ZNF876PQ49A33 203 aa9.65□□□□□ -0.86
CACNB3-219ENST00000551544 PAPPA-AS1Q5QFB9 102 aa9.65□□□□□ -0.86
CACNB3-219ENST00000551544 SFTA2Q6UW10 78 aa9.65□□□□□ -0.86
CACNB3-219ENST00000551544 TIMM17AQ99595 171 aa9.65□□□□□ -0.86
CACNB3-219ENST00000551544 ZNRF2Q8NHG8 242 aa9.64□□□□□ -0.87
CACNB3-219ENST00000551544 MYO18BQ8IUG5 2567 aa9.64□□□□□ -0.87
CACNB3-219ENST00000551544 TRBV6-5A0A0K0K1A5 114 aa9.64□□□□□ -0.87
CACNB3-219ENST00000551544 LINC01549A6NIU2 74 aa9.64□□□□□ -0.87
CACNB3-219ENST00000551544 CDIP1Q9H305 208 aa9.64□□□□□ -0.87
CACNB3-219ENST00000551544 ACACBO00763 2458 aa9.64□□□□□ -0.87
CACNB3-219ENST00000551544 TSPEAR-AS2P59090 65 aa9.64□□□□□ -0.87
CACNB3-219ENST00000551544 UBE2D3P61077 147 aa9.64□□□□□ -0.87
CACNB3-219ENST00000551544 UBE2D2P62837 147 aa9.64□□□□□ -0.87
CACNB3-219ENST00000551544 CACNA1AO00555 2505 aa9.63□□□□□ -0.87
CACNB3-219ENST00000551544 LYRM7Q5U5X0 104 aa9.63□□□□□ -0.87
CACNB3-219ENST00000551544 IGSF10Q6WRI0 2623 aa9.63□□□□□ -0.87
CACNB3-219ENST00000551544 TMEM89A2RUT3 159 aa9.63□□□□□ -0.87
CACNB3-219ENST00000551544 TSPAN13O95857 204 aa9.63□□□□□ -0.87
CACNB3-219ENST00000551544 VPREB3Q9UKI3 123 aa9.63□□□□□ -0.87
CACNB3-219ENST00000551544 ZANQ9Y493 2812 aa9.63□□□□□ -0.87
CACNB3-219ENST00000551544 FAM208BQ5VWN6 2430 aa9.62□□□□□ -0.87
CACNB3-219ENST00000551544 IGHV3-73A0A0B4J1V6 119 aa9.62□□□□□ -0.87
CACNB3-219ENST00000551544 KNCNA6PVL3 124 aa9.62□□□□□ -0.87
CACNB3-219ENST00000551544 DEFB136Q30KP8 78 aa9.62□□□□□ -0.87
CACNB3-219ENST00000551544 TRPT1Q86TN4 253 aaKnown RBP9.62□□□□□ -0.87
CACNB3-219ENST00000551544 NFE4Q86UQ8 179 aa9.62□□□□□ -0.87
CACNB3-219ENST00000551544 ZNF418Q8TF45 676 aaPredicted RBP9.62□□□□□ -0.87
CACNB3-219ENST00000551544 BEX4Q9NWD9 120 aaPredicted RBP9.62□□□□□ -0.87
CACNB3-219ENST00000551544 A0A0J9YY99 117 aa9.62□□□□□ -0.87
CACNB3-219ENST00000551544 HERV-K104P63124 156 aa9.61□□□□□ -0.87
CACNB3-219ENST00000551544 VCX2Q9H322 139 aa9.61□□□□□ -0.87
CACNB3-219ENST00000551544 ANKRD17O75179 2603 aaKnown RBP9.61□□□□□ -0.87
CACNB3-219ENST00000551544 P0DMU3 169 aa9.61□□□□□ -0.87
CACNB3-219ENST00000551544 FAM231AP0DMU4 169 aa9.61□□□□□ -0.87
CACNB3-219ENST00000551544 FAM231CP0DMU5 169 aa9.61□□□□□ -0.87
CACNB3-219ENST00000551544 C18orf65Q6ZTR6 163 aa9.61□□□□□ -0.87
CACNB3-219ENST00000551544 ZNF702PQ9H963 129 aa9.61□□□□□ -0.87
CACNB3-219ENST00000551544 IGHV3-64A0A075B6Q5 118 aa9.6□□□□□ -0.87
CACNB3-219ENST00000551544 A0A096LNT2 108 aa9.6□□□□□ -0.87
CACNB3-219ENST00000551544 LOC107984156A0A0G2JMH3 177 aa9.6□□□□□ -0.87
CACNB3-219ENST00000551544 PRM2P04554 102 aa9.6□□□□□ -0.87
CACNB3-219ENST00000551544 ELANEP08246 267 aa9.6□□□□□ -0.87
CACNB3-219ENST00000551544 RBMY1A1P0DJD3 496 aaKnown RBP9.6□□□□□ -0.87
CACNB3-219ENST00000551544 RBMY1CP0DJD4 496 aa9.6□□□□□ -0.87
CACNB3-219ENST00000551544 PSMB2P49721 201 aa9.6□□□□□ -0.87
CACNB3-219ENST00000551544 RBMY1FQ15415 496 aaKnown RBP9.6□□□□□ -0.87
CACNB3-219ENST00000551544 ARL17AQ8IVW1 177 aa9.6□□□□□ -0.87
CACNB3-219ENST00000551544 SLURP1P55000 103 aa9.6□□□□□ -0.87
CACNB3-219ENST00000551544 RHOHQ15669 191 aa9.6□□□□□ -0.87
CACNB3-219ENST00000551544 NSUN5P1Q3KNT7 163 aa9.6□□□□□ -0.87
CACNB3-219ENST00000551544 PPDPFLQ8WWR9 84 aa9.6□□□□□ -0.87
CACNB3-219ENST00000551544 UBE2E2Q96LR5 201 aa9.6□□□□□ -0.87
CACNB3-219ENST00000551544 GEMIN7Q9H840 131 aaKnown RBP9.6□□□□□ -0.87
CACNB3-219ENST00000551544 TRGV11A0A075B6L2 103 aa9.6□□□□□ -0.87
CACNB3-219ENST00000551544 I3L3M4 83 aa9.6□□□□□ -0.87
CACNB3-219ENST00000551544 J3QLI3 93 aa9.6□□□□□ -0.87
CACNB3-219ENST00000551544 J3QQQ9 107 aa9.6□□□□□ -0.87
CACNB3-219ENST00000551544 SPINK8P0C7L1 97 aa9.6□□□□□ -0.87
CACNB3-219ENST00000551544 LGALS3P17931 250 aaKnown RBP9.6□□□□□ -0.87
CACNB3-219ENST00000551544 DEFB131AP59861 70 aa9.6□□□□□ -0.87
CACNB3-219ENST00000551544 TEN1Q86WV5 123 aa9.6□□□□□ -0.87
CACNB3-219ENST00000551544 SBSPONQ8IVN8 264 aa9.6□□□□□ -0.87
CACNB3-219ENST00000551544 SS18L2Q9UHA2 77 aa9.6□□□□□ -0.87
CACNB3-219ENST00000551544 TRBV20-1A0A075B6N2 111 aa9.59□□□□□ -0.87
CACNB3-219ENST00000551544 NDUFA11Q86Y39 141 aa9.59□□□□□ -0.87
CACNB3-219ENST00000551544 C20orf203Q8NBC4 194 aa9.59□□□□□ -0.87
CACNB3-219ENST00000551544 PROK1P58294 105 aa9.59□□□□□ -0.87
CACNB3-219ENST00000551544 FHL3Q13643 280 aa9.59□□□□□ -0.87
CACNB3-219ENST00000551544 Q6ZUT4 128 aa9.59□□□□□ -0.87
CACNB3-219ENST00000551544 CENPEQ02224 2701 aa9.59□□□□□ -0.88
CACNB3-219ENST00000551544 Q6YL49 198 aa9.58□□□□□ -0.88
CACNB3-219ENST00000551544 DUX3Q96PT4 197 aa9.58□□□□□ -0.88
CACNB3-219ENST00000551544 PRB1P04280 392 aa9.58□□□□□ -0.88
CACNB3-219ENST00000551544 CARD19Q96LW7 228 aa9.58□□□□□ -0.88
CACNB3-219ENST00000551544 MT-ATP8P03928 68 aa9.57□□□□□ -0.88
CACNB3-219ENST00000551544 SLC25A29Q8N8R3 303 aa9.57□□□□□ -0.88
CACNB3-219ENST00000551544 A0A0J9YXV3 536 aa9.57□□□□□ -0.88
CACNB3-219ENST00000551544 IGHV3-30P01768 117 aa9.57□□□□□ -0.88
CACNB3-219ENST00000551544 IGHV3-30-5P0DP03 117 aa9.57□□□□□ -0.88
CACNB3-219ENST00000551544 XGP55808 180 aa9.57□□□□□ -0.88
CACNB3-219ENST00000551544 HIST2H2BDQ6DRA6 164 aa9.57□□□□□ -0.88
CACNB3-219ENST00000551544 AMELXQ99217 191 aa9.57□□□□□ -0.88
CACNB3-219ENST00000551544 TCL1BO95988 128 aa9.56□□□□□ -0.88
CACNB3-219ENST00000551544 KHDC1LQ5JSQ8 128 aa9.56□□□□□ -0.88
CACNB3-219ENST00000551544 IGLV4-3A0A075B6K6 122 aa9.56□□□□□ -0.88
CACNB3-219ENST00000551544 TMEM223A0PJW6 202 aa9.56□□□□□ -0.88
CACNB3-219ENST00000551544 ZFYVE26Q68DK2 2539 aa9.56□□□□□ -0.88
CACNB3-219ENST00000551544 FBN2P35556 2912 aa9.56□□□□□ -0.88
CACNB3-219ENST00000551544 CFC1BP0CG36 223 aa9.55□□□□□ -0.88
CACNB3-219ENST00000551544 CFC1P0CG37 223 aa9.55□□□□□ -0.88
CACNB3-219ENST00000551544 IGHV4-31P0DP07 118 aa9.55□□□□□ -0.88
CACNB3-219ENST00000551544 ZNF22P17026 224 aaPredicted RBP9.55□□□□□ -0.88
CACNB3-219ENST00000551544 FAM110AQ9BQ89 295 aa9.55□□□□□ -0.88
CACNB3-219ENST00000551544 A8MWV9 139 aa9.55□□□□□ -0.88
CACNB3-219ENST00000551544 CEMP1Q6PRD7 247 aaPredicted RBP9.55□□□□□ -0.88
CACNB3-219ENST00000551544 C10orf126Q8N4M7 172 aa9.55□□□□□ -0.88
CACNB3-219ENST00000551544 PTH2Q96A98 100 aa9.55□□□□□ -0.88
CACNB3-219ENST00000551544 PTPN13Q12923 2485 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms