RNA–Protein interactions for RNA: ENST00000551425.1

PTCH1-222, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 241 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-222ENST00000551425 IFITM2Q01629 132 aa7.49□□□□□ -1.21
PTCH1-222ENST00000551425 PIK3CD-AS1Q5SR53 167 aa7.49□□□□□ -1.21
PTCH1-222ENST00000551425 LCE2AQ5TA79 106 aaPredicted RBP7.49□□□□□ -1.21
PTCH1-222ENST00000551425 UFSP1Q6NVU6 142 aa7.49□□□□□ -1.21
PTCH1-222ENST00000551425 C14orf178Q8N769 122 aaPredicted RBP7.49□□□□□ -1.21
PTCH1-222ENST00000551425 CLRN3Q8NCR9 226 aa7.49□□□□□ -1.21
PTCH1-222ENST00000551425 HIST1H2BAQ96A08 127 aa7.49□□□□□ -1.21
PTCH1-222ENST00000551425 C11orf21Q9P2W6 132 aa7.49□□□□□ -1.21
PTCH1-222ENST00000551425 IGHV3-64A0A075B6Q5 118 aa7.48□□□□□ -1.21
PTCH1-222ENST00000551425 TCRAP04437 139 aa7.48□□□□□ -1.21
PTCH1-222ENST00000551425 CHTF8P0CG12 524 aa7.48□□□□□ -1.21
PTCH1-222ENST00000551425 RNASE3P12724 160 aaKnown RBP7.48□□□□□ -1.21
PTCH1-222ENST00000551425 MIAQ16674 131 aa7.48□□□□□ -1.21
PTCH1-222ENST00000551425 SPINK6Q6UWN8 80 aa7.48□□□□□ -1.21
PTCH1-222ENST00000551425 VAX2Q9UIW0 290 aa7.48□□□□□ -1.21
PTCH1-222ENST00000551425 PEX7O00628 323 aa7.47□□□□□ -1.21
PTCH1-222ENST00000551425 BCL2P10415 239 aa7.47□□□□□ -1.21
PTCH1-222ENST00000551425 GNG5P63218 68 aa7.47□□□□□ -1.21
PTCH1-222ENST00000551425 CLLU1Q5K131 121 aa7.47□□□□□ -1.21
PTCH1-222ENST00000551425 KRTAP26-1Q6PEX3 210 aa7.47□□□□□ -1.21
PTCH1-222ENST00000551425 GOLT1AQ6ZVE7 132 aa7.47□□□□□ -1.21
PTCH1-222ENST00000551425 C15orf54Q8N8G6 183 aa7.47□□□□□ -1.21
PTCH1-222ENST00000551425 TMEM262E9PQX1 116 aa7.46□□□□□ -1.22
PTCH1-222ENST00000551425 PDE6DO43924 150 aa7.46□□□□□ -1.22
PTCH1-222ENST00000551425 S100A9P06702 114 aaKnown RBP7.46□□□□□ -1.22
PTCH1-222ENST00000551425 MEF2BQ02080 365 aaPredicted RBP7.46□□□□□ -1.22
PTCH1-222ENST00000551425 FAM210AQ96ND0 272 aa7.46□□□□□ -1.22
PTCH1-222ENST00000551425 EIF5A2Q9GZV4 153 aaKnown RBP7.46□□□□□ -1.22
PTCH1-222ENST00000551425 NDUFS6O75380 124 aaKnown RBP7.45□□□□□ -1.22
PTCH1-222ENST00000551425 ANGP03950 147 aaKnown RBP7.45□□□□□ -1.22
PTCH1-222ENST00000551425 AKR1C3P42330 323 aa7.45□□□□□ -1.22
PTCH1-222ENST00000551425 ZNF80P51504 273 aaPredicted RBP7.45□□□□□ -1.22
PTCH1-222ENST00000551425 FLI1Q01543 452 aaPredicted RBP7.45□□□□□ -1.22
PTCH1-222ENST00000551425 MPV17L2Q567V2 206 aa7.45□□□□□ -1.22
PTCH1-222ENST00000551425 TMEM75Q8N9X5 138 aa7.45□□□□□ -1.22
PTCH1-222ENST00000551425 PSG8Q9UQ74 426 aa7.45□□□□□ -1.22
PTCH1-222ENST00000551425 SCO2A0A1W2PP80 73 aa7.44□□□□□ -1.22
PTCH1-222ENST00000551425 RHODO00212 210 aa7.44□□□□□ -1.22
PTCH1-222ENST00000551425 UBE2G1P62253 170 aa7.44□□□□□ -1.22
PTCH1-222ENST00000551425 GTSF1Q8WW33 167 aa7.44□□□□□ -1.22
PTCH1-222ENST00000551425 FMC1Q96HJ9 113 aa7.44□□□□□ -1.22
PTCH1-222ENST00000551425 NDFIP1Q9BT67 221 aa7.44□□□□□ -1.22
PTCH1-222ENST00000551425 JPT2Q9H910 190 aa7.44□□□□□ -1.22
PTCH1-222ENST00000551425 PRR34Q9NV39 138 aa7.44□□□□□ -1.22
PTCH1-222ENST00000551425 TRBV6-8A0A0A6YYG3 113 aa7.43□□□□□ -1.22
PTCH1-222ENST00000551425 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.43□□□□□ -1.22
PTCH1-222ENST00000551425 TRAV34A0A0B4J273 112 aa7.43□□□□□ -1.22
PTCH1-222ENST00000551425 TRBV6-1A0A0K0K1D8 114 aa7.43□□□□□ -1.22
PTCH1-222ENST00000551425 hDV102S1A0JD36 115 aa7.43□□□□□ -1.22
PTCH1-222ENST00000551425 UBE2D3P61077 147 aa7.43□□□□□ -1.22
PTCH1-222ENST00000551425 UBE2D2P62837 147 aa7.43□□□□□ -1.22
PTCH1-222ENST00000551425 SRSF9Q13242 221 aaKnown RBP eCLIP7.43□□□□□ -1.22
PTCH1-222ENST00000551425 PEA15Q15121 130 aa7.43□□□□□ -1.22
PTCH1-222ENST00000551425 SAPCD1Q5SSQ6 148 aa7.43□□□□□ -1.22
PTCH1-222ENST00000551425 PRNTQ86SH4 94 aa7.43□□□□□ -1.22
PTCH1-222ENST00000551425 C11orf52Q96A22 123 aa7.43□□□□□ -1.22
PTCH1-222ENST00000551425 SGK494Q96LW2 274 aa7.43□□□□□ -1.22
PTCH1-222ENST00000551425 SMDT1Q9H4I9 107 aa7.43□□□□□ -1.22
PTCH1-222ENST00000551425 MED9Q9NWA0 146 aa7.43□□□□□ -1.22
PTCH1-222ENST00000551425 TRBV10-1A0A0K0K1A3 114 aa7.42□□□□□ -1.22
PTCH1-222ENST00000551425 TMEM250H0YL14 139 aa7.42□□□□□ -1.22
PTCH1-222ENST00000551425 GCGP01275 180 aa7.42□□□□□ -1.22
PTCH1-222ENST00000551425 SLPIP03973 132 aa7.42□□□□□ -1.22
PTCH1-222ENST00000551425 PKIAP61925 76 aa7.42□□□□□ -1.22
PTCH1-222ENST00000551425 ZFP30Q9Y2G7 519 aa7.42□□□□□ -1.22
PTCH1-222ENST00000551425 TRBV7-3A0A075B6L6 115 aa7.41□□□□□ -1.22
PTCH1-222ENST00000551425 RAB19A4D1S5 217 aa7.41□□□□□ -1.22
PTCH1-222ENST00000551425 RPL35P42766 123 aaKnown RBP7.41□□□□□ -1.22
PTCH1-222ENST00000551425 RPL36AP83881 106 aaKnown RBP7.41□□□□□ -1.22
PTCH1-222ENST00000551425 RPL36ALQ969Q0 106 aaKnown RBP7.41□□□□□ -1.22
PTCH1-222ENST00000551425 AP5S1Q9NUS5 200 aa7.41□□□□□ -1.22
PTCH1-222ENST00000551425 A0A087WWL8 130 aa7.4□□□□□ -1.22
PTCH1-222ENST00000551425 LTAP01374 205 aa7.4□□□□□ -1.22
PTCH1-222ENST00000551425 SRP19P09132 144 aaKnown RBP7.4□□□□□ -1.22
PTCH1-222ENST00000551425 S100A4P26447 101 aaKnown RBP7.4□□□□□ -1.22
PTCH1-222ENST00000551425 SMUG1Q53HV7 270 aa7.4□□□□□ -1.22
PTCH1-222ENST00000551425 Q86TA4 180 aa7.4□□□□□ -1.22
PTCH1-222ENST00000551425 BAGE2Q86Y30 109 aa7.4□□□□□ -1.22
PTCH1-222ENST00000551425 IGKV3D-20A0A0C4DH25 116 aa7.39□□□□□ -1.23
PTCH1-222ENST00000551425 CEBPGP53567 150 aa7.39□□□□□ -1.23
PTCH1-222ENST00000551425 FAM74A4Q5TZK3 123 aa7.39□□□□□ -1.23
PTCH1-222ENST00000551425 COX8CQ7Z4L0 72 aa7.39□□□□□ -1.23
PTCH1-222ENST00000551425 LINC00269Q8N2A0 174 aa7.39□□□□□ -1.23
PTCH1-222ENST00000551425 OR10G8Q8NGN5 311 aa7.39□□□□□ -1.23
PTCH1-222ENST00000551425 IL36BQ9NZH7 164 aa7.39□□□□□ -1.23
PTCH1-222ENST00000551425 GNG4P50150 75 aa7.38□□□□□ -1.23
PTCH1-222ENST00000551425 SRSF3P84103 164 aaKnown RBP7.38□□□□□ -1.23
PTCH1-222ENST00000551425 COX6A2Q02221 97 aa7.38□□□□□ -1.23
PTCH1-222ENST00000551425 ZNF674Q2M3X9 581 aa7.38□□□□□ -1.23
PTCH1-222ENST00000551425 MAJINQ3KP22 176 aa7.38□□□□□ -1.23
PTCH1-222ENST00000551425 FAM74A3Q4VXF1 159 aa7.38□□□□□ -1.23
PTCH1-222ENST00000551425 CLPSL2Q6UWE3 100 aa7.38□□□□□ -1.23
PTCH1-222ENST00000551425 SMIM12Q96EX1 92 aa7.38□□□□□ -1.23
PTCH1-222ENST00000551425 CHCHD5Q9BSY4 110 aa7.38□□□□□ -1.23
PTCH1-222ENST00000551425 DERL1Q9BUN8 251 aa7.38□□□□□ -1.23
PTCH1-222ENST00000551425 MUC21A0A0G2JKD1 596 aa7.37□□□□□ -1.23
PTCH1-222ENST00000551425 LINC00862A6NCI5 91 aa7.37□□□□□ -1.23
PTCH1-222ENST00000551425 FAM231BA6NCW3 169 aa7.37□□□□□ -1.23
PTCH1-222ENST00000551425 FABP5P3A8MUU1 101 aa7.37□□□□□ -1.23
PTCH1-222ENST00000551425 H7C1H1 209 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms