RNA–Protein interactions for RNA: ENST00000551344.1

DDX54-208, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 872 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-208ENST00000551344 RPP21Q9H633 154 aaKnown RBP12.7□□□□□ -0.38
DDX54-208ENST00000551344 LRP1BQ9NZR2 4599 aa12.69□□□□□ -0.38
DDX54-208ENST00000551344 TRBV6-8A0A0A6YYG3 113 aa12.69□□□□□ -0.38
DDX54-208ENST00000551344 LRCOL1A6NCL2 159 aa12.69□□□□□ -0.38
DDX54-208ENST00000551344 TRGC1P0CF51 173 aa12.69□□□□□ -0.38
DDX54-208ENST00000551344 NTF3P20783 257 aa12.69□□□□□ -0.38
DDX54-208ENST00000551344 RNASE7Q9H1E1 156 aaKnown RBP12.69□□□□□ -0.38
DDX54-208ENST00000551344 A0A087WX48 190 aa12.68□□□□□ -0.38
DDX54-208ENST00000551344 H7C1H1 209 aa12.68□□□□□ -0.38
DDX54-208ENST00000551344 ELOBQ15370 118 aa12.68□□□□□ -0.38
DDX54-208ENST00000551344 TMEM97Q5BJF2 176 aa12.68□□□□□ -0.38
DDX54-208ENST00000551344 KCNIP4Q6PIL6 250 aa12.68□□□□□ -0.38
DDX54-208ENST00000551344 DNAJC30Q96LL9 226 aa12.68□□□□□ -0.38
DDX54-208ENST00000551344 FAM210AQ96ND0 272 aa12.68□□□□□ -0.38
DDX54-208ENST00000551344 CNFNQ9BYD5 112 aa12.68□□□□□ -0.38
DDX54-208ENST00000551344 M0QY20 66 aa12.67□□□□□ -0.38
DDX54-208ENST00000551344 CTRLP40313 264 aa12.67□□□□□ -0.38
DDX54-208ENST00000551344 COX11Q9Y6N1 276 aa12.67□□□□□ -0.38
DDX54-208ENST00000551344 MGPP08493 103 aa12.66□□□□□ -0.38
DDX54-208ENST00000551344 CEBPGP53567 150 aa12.66□□□□□ -0.38
DDX54-208ENST00000551344 FAM231DQ6ZW35 169 aa12.66□□□□□ -0.38
DDX54-208ENST00000551344 DPH3P1Q9H4G8 78 aa12.66□□□□□ -0.38
DDX54-208ENST00000551344 TMEM262E9PQX1 116 aa12.65□□□□□ -0.38
DDX54-208ENST00000551344 FUSP35637 526 aaKnown RBP eCLIP12.65□□□□□ -0.38
DDX54-208ENST00000551344 RMI2Q96E14 147 aa12.65□□□□□ -0.38
DDX54-208ENST00000551344 KLK12Q9UKR0 248 aa12.65□□□□□ -0.38
DDX54-208ENST00000551344 GATCO43716 136 aaKnown RBP12.64□□□□□ -0.39
DDX54-208ENST00000551344 PKIAP61925 76 aa12.64□□□□□ -0.39
DDX54-208ENST00000551344 TWIST1Q15672 202 aa12.64□□□□□ -0.39
DDX54-208ENST00000551344 SUMO4Q6EEV6 95 aa12.64□□□□□ -0.39
DDX54-208ENST00000551344 NTN5Q8WTR8 489 aaPredicted RBP12.64□□□□□ -0.39
DDX54-208ENST00000551344 A8MWL6 223 aa12.63□□□□□ -0.39
DDX54-208ENST00000551344 RASL11AQ6T310 242 aa12.63□□□□□ -0.39
DDX54-208ENST00000551344 Q8N814 137 aa12.63□□□□□ -0.39
DDX54-208ENST00000551344 GTSF1Q8WW33 167 aa12.63□□□□□ -0.39
DDX54-208ENST00000551344 SMIM7Q9BQ49 75 aa12.63□□□□□ -0.39
DDX54-208ENST00000551344 SRP19P09132 144 aaKnown RBP12.62□□□□□ -0.39
DDX54-208ENST00000551344 Q0VG73 95 aa12.62□□□□□ -0.39
DDX54-208ENST00000551344 CT83Q5H943 113 aa12.62□□□□□ -0.39
DDX54-208ENST00000551344 NTM-AS1Q6ZSK4 140 aa12.62□□□□□ -0.39
DDX54-208ENST00000551344 CHCHD5Q9BSY4 110 aa12.62□□□□□ -0.39
DDX54-208ENST00000551344 NIT2Q9NQR4 276 aa12.62□□□□□ -0.39
DDX54-208ENST00000551344 ZNF727A8MUV8 499 aa12.61□□□□□ -0.39
DDX54-208ENST00000551344 GCSHP23434 173 aa12.61□□□□□ -0.39
DDX54-208ENST00000551344 FOXA3P55318 350 aaPredicted RBP12.61□□□□□ -0.39
DDX54-208ENST00000551344 LINC01551Q86U37 167 aa12.61□□□□□ -0.39
DDX54-208ENST00000551344 UBE2WQ96B02 151 aa12.61□□□□□ -0.39
DDX54-208ENST00000551344 DNAH5Q8TE73 4624 aa12.61□□□□□ -0.39
DDX54-208ENST00000551344 RYR1P21817 5038 aa12.6□□□□□ -0.39
DDX54-208ENST00000551344 HSPG2P98160 4391 aa12.6□□□□□ -0.39
DDX54-208ENST00000551344 TRBV25-1A0A075B6N4 114 aa12.6□□□□□ -0.39
DDX54-208ENST00000551344 TEX261Q6UWH6 196 aa12.6□□□□□ -0.39
DDX54-208ENST00000551344 SMIM15Q7Z3B0 74 aa12.6□□□□□ -0.39
DDX54-208ENST00000551344 MAPKAPK5-AS1Q8N8E1 139 aa12.6□□□□□ -0.39
DDX54-208ENST00000551344 FRZBQ92765 325 aa12.6□□□□□ -0.39
DDX54-208ENST00000551344 IGLV5-52A0A0A0MRZ9 124 aa12.59□□□□□ -0.39
DDX54-208ENST00000551344 KRTAP10-1P60331 282 aa12.59□□□□□ -0.39
DDX54-208ENST00000551344 IQCJQ1A5X6 159 aa12.59□□□□□ -0.39
DDX54-208ENST00000551344 ATRAIDQ6UW56 229 aa12.59□□□□□ -0.39
DDX54-208ENST00000551344 IGKV2D-24A0A075B6R9 120 aa12.58□□□□□ -0.4
DDX54-208ENST00000551344 FAM74A3Q4VXF1 159 aa12.58□□□□□ -0.4
DDX54-208ENST00000551344 MPV17L2Q567V2 206 aa12.58□□□□□ -0.4
DDX54-208ENST00000551344 KRTAP17-1Q9BYP8 105 aa12.58□□□□□ -0.4
DDX54-208ENST00000551344 OSTCQ9NRP0 149 aa12.58□□□□□ -0.4
DDX54-208ENST00000551344 IGHV1-24A0A0C4DH33 117 aa12.57□□□□□ -0.4
DDX54-208ENST00000551344 Q8N1X5 172 aa12.57□□□□□ -0.4
DDX54-208ENST00000551344 C15orf54Q8N8G6 183 aa12.57□□□□□ -0.4
DDX54-208ENST00000551344 PGLYRP4Q96LB8 373 aa12.57□□□□□ -0.4
DDX54-208ENST00000551344 GFRA4Q9GZZ7 299 aa12.57□□□□□ -0.4
DDX54-208ENST00000551344 FAM231BA6NCW3 169 aa12.56□□□□□ -0.4
DDX54-208ENST00000551344 ANGP03950 147 aaKnown RBP12.56□□□□□ -0.4
DDX54-208ENST00000551344 TMEM241Q24JQ0 296 aa12.56□□□□□ -0.4
DDX54-208ENST00000551344 ENHOQ6UWT2 76 aa12.56□□□□□ -0.4
DDX54-208ENST00000551344 TSKUQ8WUA8 353 aa12.56□□□□□ -0.4
DDX54-208ENST00000551344 BAALCQ8WXS3 180 aa12.56□□□□□ -0.4
DDX54-208ENST00000551344 SMDT1Q9H4I9 107 aa12.56□□□□□ -0.4
DDX54-208ENST00000551344 CRPP02741 224 aa12.55□□□□□ -0.4
DDX54-208ENST00000551344 GAGE6Q13070 117 aa12.55□□□□□ -0.4
DDX54-208ENST00000551344 WFDC2Q14508 124 aa12.55□□□□□ -0.4
DDX54-208ENST00000551344 PEA15Q15121 130 aa12.55□□□□□ -0.4
DDX54-208ENST00000551344 Q8N976 141 aa12.55□□□□□ -0.4
DDX54-208ENST00000551344 GATD1Q8NB37 220 aa12.55□□□□□ -0.4
DDX54-208ENST00000551344 BORCS7Q96B45 105 aa12.55□□□□□ -0.4
DDX54-208ENST00000551344 KRTAP4-5Q9BYR2 181 aa12.55□□□□□ -0.4
DDX54-208ENST00000551344 APOBP04114 4563 aaKnown RBP12.54□□□□□ -0.4
DDX54-208ENST00000551344 XGP55808 180 aa12.54□□□□□ -0.4
DDX54-208ENST00000551344 RBX1P62877 108 aa12.54□□□□□ -0.4
DDX54-208ENST00000551344 C1orf43Q9BWL3 253 aa12.54□□□□□ -0.4
DDX54-208ENST00000551344 HIGD1CA8MV81 97 aa12.53□□□□□ -0.4
DDX54-208ENST00000551344 LECT2O14960 151 aa12.53□□□□□ -0.4
DDX54-208ENST00000551344 MIAQ16674 131 aa12.53□□□□□ -0.4
DDX54-208ENST00000551344 TMEM243Q9BU79 118 aa12.53□□□□□ -0.4
DDX54-208ENST00000551344 TRAV26-2A0A0B4J265 109 aa12.52□□□□□ -0.41
DDX54-208ENST00000551344 A0A1B0GUT8 65 aa12.52□□□□□ -0.41
DDX54-208ENST00000551344 A0A1B0GUV1 79 aa12.52□□□□□ -0.41
DDX54-208ENST00000551344 C9JQL5 133 aa12.52□□□□□ -0.41
DDX54-208ENST00000551344 COTL1Q14019 142 aa12.52□□□□□ -0.41
DDX54-208ENST00000551344 ISOC2Q96AB3 205 aa12.52□□□□□ -0.41
DDX54-208ENST00000551344 PRR34Q9NV39 138 aa12.52□□□□□ -0.41
DDX54-208ENST00000551344 RPL23P62829 140 aaKnown RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms