RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 OR2D3Q8NGH3 330 aa8.58□□□□□ -1.04
NPAS3-209ENST00000551008 SMIM12Q96EX1 92 aa8.58□□□□□ -1.04
NPAS3-209ENST00000551008 VAX2Q9UIW0 290 aa8.58□□□□□ -1.04
NPAS3-209ENST00000551008 KLK12Q9UKR0 248 aa8.58□□□□□ -1.04
NPAS3-209ENST00000551008 hCG_2014768A0A024R1R8 64 aa8.57□□□□□ -1.04
NPAS3-209ENST00000551008 K7EN84 100 aa8.57□□□□□ -1.04
NPAS3-209ENST00000551008 PDE6DO43924 150 aa8.57□□□□□ -1.04
NPAS3-209ENST00000551008 GNG4P50150 75 aa8.57□□□□□ -1.04
NPAS3-209ENST00000551008 MPV17L2Q567V2 206 aa8.57□□□□□ -1.04
NPAS3-209ENST00000551008 FER1L6-AS1Q8NA97 138 aa8.57□□□□□ -1.04
NPAS3-209ENST00000551008 BAALCQ8WXS3 180 aa8.57□□□□□ -1.04
NPAS3-209ENST00000551008 TM2D2Q9BX73 214 aa8.57□□□□□ -1.04
NPAS3-209ENST00000551008 SRRM2Q9UQ35 2752 aaKnown RBP8.56□□□□□ -1.04
NPAS3-209ENST00000551008 M0QY20 66 aa8.56□□□□□ -1.04
NPAS3-209ENST00000551008 ENHOQ6UWT2 76 aa8.56□□□□□ -1.04
NPAS3-209ENST00000551008 Q6ZSA8 131 aa8.56□□□□□ -1.04
NPAS3-209ENST00000551008 AKAP14Q86UN6 197 aa8.56□□□□□ -1.04
NPAS3-209ENST00000551008 AP1S3Q96PC3 154 aa8.56□□□□□ -1.04
NPAS3-209ENST00000551008 TMEM70Q9BUB7 260 aa8.56□□□□□ -1.04
NPAS3-209ENST00000551008 CHCHD7Q9BUK0 85 aa8.56□□□□□ -1.04
NPAS3-209ENST00000551008 MED9Q9NWA0 146 aa8.56□□□□□ -1.04
NPAS3-209ENST00000551008 MYCBP2O75592 4640 aa8.56□□□□□ -1.04
NPAS3-209ENST00000551008 EPM2AB3EWF7 344 aa8.55□□□□□ -1.04
NPAS3-209ENST00000551008 TEX46H3BTG2 121 aa8.55□□□□□ -1.04
NPAS3-209ENST00000551008 SMR3BP02814 79 aaPredicted RBP8.55□□□□□ -1.04
NPAS3-209ENST00000551008 Q5VSD8 79 aa8.55□□□□□ -1.04
NPAS3-209ENST00000551008 SUMO4Q6EEV6 95 aa8.55□□□□□ -1.04
NPAS3-209ENST00000551008 ALKAL2Q6UX46 152 aa8.55□□□□□ -1.04
NPAS3-209ENST00000551008 NUDT10Q8NFP7 164 aa8.55□□□□□ -1.04
NPAS3-209ENST00000551008 LYPD6BQ8NI32 183 aa8.55□□□□□ -1.04
NPAS3-209ENST00000551008 UBE2WQ96B02 151 aa8.55□□□□□ -1.04
NPAS3-209ENST00000551008 NUDT11Q96G61 164 aa8.55□□□□□ -1.04
NPAS3-209ENST00000551008 IFNA1P01562 189 aa8.54□□□□□ -1.04
NPAS3-209ENST00000551008 CTRLP40313 264 aa8.54□□□□□ -1.04
NPAS3-209ENST00000551008 RPS20P60866 119 aaKnown RBP8.54□□□□□ -1.04
NPAS3-209ENST00000551008 LINC01620Q4KN68 170 aa8.54□□□□□ -1.04
NPAS3-209ENST00000551008 TOR2AQ5JU69 321 aa8.54□□□□□ -1.04
NPAS3-209ENST00000551008 KRTAP26-1Q6PEX3 210 aa8.54□□□□□ -1.04
NPAS3-209ENST00000551008 LYZL1Q6UWQ5 148 aa8.54□□□□□ -1.04
NPAS3-209ENST00000551008 Q8N976 141 aa8.54□□□□□ -1.04
NPAS3-209ENST00000551008 TPPP3Q9BW30 176 aa8.54□□□□□ -1.04
NPAS3-209ENST00000551008 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.53□□□□□ -1.04
NPAS3-209ENST00000551008 IGKV2D-24A0A075B6R9 120 aa8.53□□□□□ -1.04
NPAS3-209ENST00000551008 A0A087WX48 190 aa8.53□□□□□ -1.04
NPAS3-209ENST00000551008 A0A1B0GVG6 124 aa8.53□□□□□ -1.04
NPAS3-209ENST00000551008 F5H697 171 aa8.53□□□□□ -1.04
NPAS3-209ENST00000551008 P01737 135 aa8.53□□□□□ -1.04
NPAS3-209ENST00000551008 MGPP08493 103 aa8.53□□□□□ -1.04
NPAS3-209ENST00000551008 OCC1Q8TAD7 63 aa8.53□□□□□ -1.04
NPAS3-209ENST00000551008 CNFNQ9BYD5 112 aa8.53□□□□□ -1.04
NPAS3-209ENST00000551008 RNASE7Q9H1E1 156 aaKnown RBP8.53□□□□□ -1.04
NPAS3-209ENST00000551008 URGCP-MRPS24S4R325 110 aa8.53□□□□□ -1.04
NPAS3-209ENST00000551008 NKX2-5P52952 324 aaPredicted RBP8.52□□□□□ -1.05
NPAS3-209ENST00000551008 CACNG7P62955 275 aa8.52□□□□□ -1.05
NPAS3-209ENST00000551008 C15orf54Q8N8G6 183 aa8.52□□□□□ -1.05
NPAS3-209ENST00000551008 DAZAP1Q96EP5 407 aaKnown RBP8.52□□□□□ -1.05
NPAS3-209ENST00000551008 NTF3P20783 257 aa8.51□□□□□ -1.05
NPAS3-209ENST00000551008 TAGLN2P37802 199 aaKnown RBP8.51□□□□□ -1.05
NPAS3-209ENST00000551008 IQCJQ1A5X6 159 aa8.51□□□□□ -1.05
NPAS3-209ENST00000551008 GTSF1Q8WW33 167 aa8.51□□□□□ -1.05
NPAS3-209ENST00000551008 PRR34Q9NV39 138 aa8.51□□□□□ -1.05
NPAS3-209ENST00000551008 COX11Q9Y6N1 276 aa8.51□□□□□ -1.05
NPAS3-209ENST00000551008 DMBT1Q9UGM3 2413 aaPredicted RBP8.51□□□□□ -1.05
NPAS3-209ENST00000551008 TMEM262E9PQX1 116 aa8.5□□□□□ -1.05
NPAS3-209ENST00000551008 F2Z2F3 143 aa8.5□□□□□ -1.05
NPAS3-209ENST00000551008 SMIM17P0DL12 118 aa8.5□□□□□ -1.05
NPAS3-209ENST00000551008 RBX1P62877 108 aa8.5□□□□□ -1.05
NPAS3-209ENST00000551008 GAGE6Q13070 117 aa8.5□□□□□ -1.05
NPAS3-209ENST00000551008 ELOBQ15370 118 aa8.5□□□□□ -1.05
NPAS3-209ENST00000551008 RMI2Q96E14 147 aa8.5□□□□□ -1.05
NPAS3-209ENST00000551008 CHCHD5Q9BSY4 110 aa8.5□□□□□ -1.05
NPAS3-209ENST00000551008 RPP21Q9H633 154 aaKnown RBP8.5□□□□□ -1.05
NPAS3-209ENST00000551008 HERC1Q15751 4861 aa8.49□□□□□ -1.05
NPAS3-209ENST00000551008 TMEM250H0YL14 139 aa8.49□□□□□ -1.05
NPAS3-209ENST00000551008 ANGP03950 147 aaKnown RBP8.49□□□□□ -1.05
NPAS3-209ENST00000551008 WDR73Q6P4I2 378 aa8.49□□□□□ -1.05
NPAS3-209ENST00000551008 RASL11AQ6T310 242 aa8.49□□□□□ -1.05
NPAS3-209ENST00000551008 CLPSL2Q6UWE3 100 aa8.49□□□□□ -1.05
NPAS3-209ENST00000551008 DEFB104AQ8WTQ1 72 aa8.49□□□□□ -1.05
NPAS3-209ENST00000551008 FRZBQ92765 325 aa8.49□□□□□ -1.05
NPAS3-209ENST00000551008 GFRA4Q9GZZ7 299 aa8.49□□□□□ -1.05
NPAS3-209ENST00000551008 DPH3P1Q9H4G8 78 aa8.49□□□□□ -1.05
NPAS3-209ENST00000551008 BIN3Q9NQY0 253 aa8.49□□□□□ -1.05
NPAS3-209ENST00000551008 XKRY2A2RUG3 117 aa8.48□□□□□ -1.05
NPAS3-209ENST00000551008 TRGC1P0CF51 173 aa8.48□□□□□ -1.05
NPAS3-209ENST00000551008 INAFM2P0DMQ5 153 aa8.48□□□□□ -1.05
NPAS3-209ENST00000551008 FOXA3P55318 350 aaPredicted RBP8.48□□□□□ -1.05
NPAS3-209ENST00000551008 BLOC1S1P78537 153 aa8.48□□□□□ -1.05
NPAS3-209ENST00000551008 Q0VG73 95 aa8.48□□□□□ -1.05
NPAS3-209ENST00000551008 GATD1Q8NB37 220 aa8.48□□□□□ -1.05
NPAS3-209ENST00000551008 C20orf203Q8NBC4 194 aa8.48□□□□□ -1.05
NPAS3-209ENST00000551008 IGLV4-60A0A075B6I1 120 aa8.47□□□□□ -1.05
NPAS3-209ENST00000551008 TRBV25-1A0A075B6N4 114 aa8.47□□□□□ -1.05
NPAS3-209ENST00000551008 TRAV26-2A0A0B4J265 109 aa8.47□□□□□ -1.05
NPAS3-209ENST00000551008 IGHV1-24A0A0C4DH33 117 aa8.47□□□□□ -1.05
NPAS3-209ENST00000551008 TMEM97Q5BJF2 176 aa8.47□□□□□ -1.05
NPAS3-209ENST00000551008 C1orf43Q9BWL3 253 aa8.47□□□□□ -1.05
NPAS3-209ENST00000551008 NIT2Q9NQR4 276 aa8.47□□□□□ -1.05
NPAS3-209ENST00000551008 H7C1H1 209 aa8.46□□□□□ -1.06
NPAS3-209ENST00000551008 KCNIP4Q6PIL6 250 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms