RNA–Protein interactions for RNA: ENST00000550914.6

PTCH1-221, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-221ENST00000550914 CHCHD5Q9BSY4 110 aa8.3□□□□□ -1.08
PTCH1-221ENST00000550914 SSBP4Q9BWG4 385 aaPredicted RBP8.3□□□□□ -1.08
PTCH1-221ENST00000550914 PRR34Q9NV39 138 aa8.3□□□□□ -1.08
PTCH1-221ENST00000550914 PLA2G2DQ9UNK4 145 aa8.3□□□□□ -1.08
PTCH1-221ENST00000550914 HLA-DQA1P01909 254 aa8.29□□□□□ -1.08
PTCH1-221ENST00000550914 PRSS1P07477 247 aa8.29□□□□□ -1.08
PTCH1-221ENST00000550914 OR5AL1P0C617 328 aa8.29□□□□□ -1.08
PTCH1-221ENST00000550914 RPL19P84098 196 aaKnown RBP8.29□□□□□ -1.08
PTCH1-221ENST00000550914 OR10AG1Q8NH19 301 aa8.29□□□□□ -1.08
PTCH1-221ENST00000550914 MLST8Q9BVC4 326 aa8.28□□□□□ -1.08
PTCH1-221ENST00000550914 RBX1P62877 108 aa8.27□□□□□ -1.09
PTCH1-221ENST00000550914 SPANXN1Q5VSR9 72 aa8.27□□□□□ -1.09
PTCH1-221ENST00000550914 KRTAP26-1Q6PEX3 210 aa8.27□□□□□ -1.09
PTCH1-221ENST00000550914 NTM-AS1Q6ZSK4 140 aa8.27□□□□□ -1.09
PTCH1-221ENST00000550914 CLRN3Q8NCR9 226 aa8.27□□□□□ -1.09
PTCH1-221ENST00000550914 DAZAP1Q96EP5 407 aaKnown RBP8.27□□□□□ -1.09
PTCH1-221ENST00000550914 CYTL1Q9NRR1 136 aa8.27□□□□□ -1.09
PTCH1-221ENST00000550914 TRBV25-1A0A075B6N4 114 aa8.26□□□□□ -1.09
PTCH1-221ENST00000550914 F5H697 171 aa8.26□□□□□ -1.09
PTCH1-221ENST00000550914 G3V3Q6 166 aa8.26□□□□□ -1.09
PTCH1-221ENST00000550914 PAGE4O60829 102 aa8.26□□□□□ -1.09
PTCH1-221ENST00000550914 IQCJQ1A5X6 159 aa8.26□□□□□ -1.09
PTCH1-221ENST00000550914 SDIM1Q6ZPB5 146 aa8.26□□□□□ -1.09
PTCH1-221ENST00000550914 KIF25-AS1Q9Y6Z4 181 aa8.26□□□□□ -1.09
PTCH1-221ENST00000550914 SMIM17P0DL12 118 aa8.25□□□□□ -1.09
PTCH1-221ENST00000550914 HNRNPA3P51991 378 aaKnown RBP8.25□□□□□ -1.09
PTCH1-221ENST00000550914 CNBPP62633 177 aaKnown RBP8.25□□□□□ -1.09
PTCH1-221ENST00000550914 CIRBPQ14011 172 aaKnown RBP8.25□□□□□ -1.09
PTCH1-221ENST00000550914 BAGE2Q86Y30 109 aa8.25□□□□□ -1.09
PTCH1-221ENST00000550914 LINC00269Q8N2A0 174 aa8.25□□□□□ -1.09
PTCH1-221ENST00000550914 MBD3L1Q8WWY6 194 aa8.25□□□□□ -1.09
PTCH1-221ENST00000550914 AP1S3Q96PC3 154 aa8.25□□□□□ -1.09
PTCH1-221ENST00000550914 DERL1Q9BUN8 251 aa8.25□□□□□ -1.09
PTCH1-221ENST00000550914 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.25□□□□□ -1.09
PTCH1-221ENST00000550914 TRAV8-4A0A0B4J246 113 aa8.24□□□□□ -1.09
PTCH1-221ENST00000550914 A0A0D9SG52 128 aa8.24□□□□□ -1.09
PTCH1-221ENST00000550914 SCO2A0A1W2PP80 73 aa8.24□□□□□ -1.09
PTCH1-221ENST00000550914 UMAD1C9J7I0 102 aa8.24□□□□□ -1.09
PTCH1-221ENST00000550914 ARPC5O15511 151 aa8.24□□□□□ -1.09
PTCH1-221ENST00000550914 PFDN1O60925 122 aa8.24□□□□□ -1.09
PTCH1-221ENST00000550914 P01737 135 aa8.24□□□□□ -1.09
PTCH1-221ENST00000550914 SFT2D1Q8WV19 159 aa8.24□□□□□ -1.09
PTCH1-221ENST00000550914 BATF3Q9NR55 127 aa8.24□□□□□ -1.09
PTCH1-221ENST00000550914 IGHV1-24A0A0C4DH33 117 aa8.23□□□□□ -1.09
PTCH1-221ENST00000550914 H7C1H1 209 aa8.23□□□□□ -1.09
PTCH1-221ENST00000550914 GAGE6Q13070 117 aa8.23□□□□□ -1.09
PTCH1-221ENST00000550914 Q6ZRU5 148 aa8.23□□□□□ -1.09
PTCH1-221ENST00000550914 MUC21A0A0G2JKD1 596 aa8.22□□□□□ -1.09
PTCH1-221ENST00000550914 MUC21A0A140T8X8 626 aa8.22□□□□□ -1.09
PTCH1-221ENST00000550914 A0A1B0GUV1 79 aa8.22□□□□□ -1.09
PTCH1-221ENST00000550914 PANO1I0J062 215 aa8.22□□□□□ -1.09
PTCH1-221ENST00000550914 M0QY20 66 aa8.22□□□□□ -1.09
PTCH1-221ENST00000550914 REG3AQ06141 175 aa8.22□□□□□ -1.09
PTCH1-221ENST00000550914 ZNF345Q14585 488 aa8.22□□□□□ -1.09
PTCH1-221ENST00000550914 CLPSL2Q6UWE3 100 aa8.22□□□□□ -1.09
PTCH1-221ENST00000550914 TMUB2Q71RG4 321 aa8.22□□□□□ -1.09
PTCH1-221ENST00000550914 RNF185Q96GF1 192 aa8.22□□□□□ -1.09
PTCH1-221ENST00000550914 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.21□□□□□ -1.1
PTCH1-221ENST00000550914 MT1HL1P0DM35 61 aa8.21□□□□□ -1.1
PTCH1-221ENST00000550914 GZMBP10144 247 aa8.21□□□□□ -1.1
PTCH1-221ENST00000550914 FAM213BQ8TBF2 198 aa8.21□□□□□ -1.1
PTCH1-221ENST00000550914 IGHV3-64A0A075B6Q5 118 aa8.2□□□□□ -1.1
PTCH1-221ENST00000550914 hDV102S1A0JD36 115 aa8.2□□□□□ -1.1
PTCH1-221ENST00000550914 RPS20P60866 119 aaKnown RBP8.2□□□□□ -1.1
PTCH1-221ENST00000550914 KCNRGQ8N5I3 272 aa8.2□□□□□ -1.1
PTCH1-221ENST00000550914 C20orf203Q8NBC4 194 aa8.2□□□□□ -1.1
PTCH1-221ENST00000550914 AP5S1Q9NUS5 200 aa8.2□□□□□ -1.1
PTCH1-221ENST00000550914 IGLV10-54A0A075B6I4 117 aa8.19□□□□□ -1.1
PTCH1-221ENST00000550914 IGLC6P0CF74 106 aa8.19□□□□□ -1.1
PTCH1-221ENST00000550914 RPL35P42766 123 aaKnown RBP8.19□□□□□ -1.1
PTCH1-221ENST00000550914 SSTP61278 116 aa8.19□□□□□ -1.1
PTCH1-221ENST00000550914 CACNG7P62955 275 aa8.19□□□□□ -1.1
PTCH1-221ENST00000550914 C11orf52Q96A22 123 aa8.19□□□□□ -1.1
PTCH1-221ENST00000550914 PGLYRP4Q96LB8 373 aa8.19□□□□□ -1.1
PTCH1-221ENST00000550914 TMEM243Q9BU79 118 aa8.19□□□□□ -1.1
PTCH1-221ENST00000550914 H2AFB1P0C5Y9 115 aa8.18□□□□□ -1.1
PTCH1-221ENST00000550914 SUMO4Q6EEV6 95 aa8.18□□□□□ -1.1
PTCH1-221ENST00000550914 FER1L6-AS1Q8NA97 138 aa8.18□□□□□ -1.1
PTCH1-221ENST00000550914 SPACA4Q8TDM5 124 aa8.18□□□□□ -1.1
PTCH1-221ENST00000550914 IGLV4-60A0A075B6I1 120 aa8.17□□□□□ -1.1
PTCH1-221ENST00000550914 A0A1B0GV50 99 aa8.17□□□□□ -1.1
PTCH1-221ENST00000550914 F2Z2F3 143 aa8.17□□□□□ -1.1
PTCH1-221ENST00000550914 MGPP08493 103 aa8.17□□□□□ -1.1
PTCH1-221ENST00000550914 RASL11AQ6T310 242 aa8.17□□□□□ -1.1
PTCH1-221ENST00000550914 SMIM12Q96EX1 92 aa8.17□□□□□ -1.1
PTCH1-221ENST00000550914 MANBALQ9NQG1 85 aa8.17□□□□□ -1.1
PTCH1-221ENST00000550914 A0A087WYN8 130 aa8.16□□□□□ -1.1
PTCH1-221ENST00000550914 XKRY2A2RUG3 117 aa8.16□□□□□ -1.1
PTCH1-221ENST00000550914 C19orf71A6NCJ1 209 aa8.16□□□□□ -1.1
PTCH1-221ENST00000550914 HMSDA8MTL9 139 aa8.16□□□□□ -1.1
PTCH1-221ENST00000550914 SLPIP03973 132 aa8.16□□□□□ -1.1
PTCH1-221ENST00000550914 TRGC1P0CF51 173 aa8.16□□□□□ -1.1
PTCH1-221ENST00000550914 NKX2-5P52952 324 aaPredicted RBP8.16□□□□□ -1.1
PTCH1-221ENST00000550914 EIF5AP63241 154 aaKnown RBP8.16□□□□□ -1.1
PTCH1-221ENST00000550914 WDR73Q6P4I2 378 aa8.16□□□□□ -1.1
PTCH1-221ENST00000550914 OR2D3Q8NGH3 330 aa8.16□□□□□ -1.1
PTCH1-221ENST00000550914 DPH3Q96FX2 82 aa8.16□□□□□ -1.1
PTCH1-221ENST00000550914 TPPP3Q9BW30 176 aa8.16□□□□□ -1.1
PTCH1-221ENST00000550914 GFRA4Q9GZZ7 299 aa8.16□□□□□ -1.1
PTCH1-221ENST00000550914 NIT2Q9NQR4 276 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms