RNA–Protein interactions for RNA: ENST00000550818.1

TSPAN8-205, Transcript of tetraspanin 8, humanhuman

TSL 1 (best)

Gene TSPAN8, Length 627 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN8-205ENST00000550818 ST20Q9HBF5 79 aa1.28□□□□□ -2.2
TSPAN8-205ENST00000550818 MRPL35Q9NZE8 188 aaKnown RBP1.28□□□□□ -2.2
TSPAN8-205ENST00000550818 CACFD1Q9UGQ2 172 aa1.28□□□□□ -2.2
TSPAN8-205ENST00000550818 PLEKHH2Q8IVE3 1493 aa1.28□□□□□ -2.2
TSPAN8-205ENST00000550818 EPRSP07814 1512 aaKnown RBP1.28□□□□□ -2.2
TSPAN8-205ENST00000550818 MAGI3Q5TCQ9 1506 aa1.28□□□□□ -2.2
TSPAN8-205ENST00000550818 ABCA8O94911 1581 aa1.28□□□□□ -2.2
TSPAN8-205ENST00000550818 DIP2BQ9P265 1576 aa1.28□□□□□ -2.2
TSPAN8-205ENST00000550818 SHROOM2Q13796 1616 aa1.28□□□□□ -2.2
TSPAN8-205ENST00000550818 MAP3K4Q9Y6R4 1608 aa1.28□□□□□ -2.2
TSPAN8-205ENST00000550818 LAMB2P55268 1798 aa1.28□□□□□ -2.2
TSPAN8-205ENST00000550818 TANC1Q9C0D5 1861 aa1.28□□□□□ -2.2
TSPAN8-205ENST00000550818 MICAL3Q7RTP6 2002 aa1.28□□□□□ -2.2
TSPAN8-205ENST00000550818 ZGRF1Q86YA3 2104 aa1.27□□□□□ -2.21
TSPAN8-205ENST00000550818 DOCK11Q5JSL3 2073 aa1.27□□□□□ -2.21
TSPAN8-205ENST00000550818 BTAF1O14981 1849 aa1.27□□□□□ -2.21
TSPAN8-205ENST00000550818 KIAA1549LQ6ZVL6 1849 aa1.27□□□□□ -2.21
TSPAN8-205ENST00000550818 PATJQ8NI35 1801 aa1.27□□□□□ -2.21
TSPAN8-205ENST00000550818 PPRC1Q5VV67 1664 aaKnown RBP1.27□□□□□ -2.21
TSPAN8-205ENST00000550818 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP1.27□□□□□ -2.21
TSPAN8-205ENST00000550818 IQSEC2Q5JU85 1478 aa1.27□□□□□ -2.21
TSPAN8-205ENST00000550818 BLMP54132 1417 aaPredicted RBP1.27□□□□□ -2.21
TSPAN8-205ENST00000550818 TRAV1-1A0A0B4J248 108 aa1.27□□□□□ -2.21
TSPAN8-205ENST00000550818 ASAH2BP0C7U1 165 aa1.27□□□□□ -2.21
TSPAN8-205ENST00000550818 PIRTP0C851 137 aa1.27□□□□□ -2.21
TSPAN8-205ENST00000550818 IGLC2P0DOY2 106 aa1.27□□□□□ -2.21
TSPAN8-205ENST00000550818 IGLC3P0DOY3 106 aa1.27□□□□□ -2.21
TSPAN8-205ENST00000550818 DEFA5Q01523 94 aa1.27□□□□□ -2.21
TSPAN8-205ENST00000550818 ADIRFQ15847 76 aa1.27□□□□□ -2.21
TSPAN8-205ENST00000550818 HEPN1Q6WQI6 88 aa1.27□□□□□ -2.21
TSPAN8-205ENST00000550818 ARPINQ7Z6K5 226 aa1.27□□□□□ -2.21
TSPAN8-205ENST00000550818 NDUFA11Q86Y39 141 aa1.27□□□□□ -2.21
TSPAN8-205ENST00000550818 FAM19A2Q8N3H0 131 aa1.27□□□□□ -2.21
TSPAN8-205ENST00000550818 PPDPFLQ8WWR9 84 aa1.27□□□□□ -2.21
TSPAN8-205ENST00000550818 TMEM141Q96I45 108 aa1.27□□□□□ -2.21
TSPAN8-205ENST00000550818 MGST2Q99735 147 aa1.27□□□□□ -2.21
TSPAN8-205ENST00000550818 SMIM7Q9BQ49 75 aa1.27□□□□□ -2.21
TSPAN8-205ENST00000550818 C20orf78Q9BR46 151 aa1.27□□□□□ -2.21
TSPAN8-205ENST00000550818 CYP4F30PQ9H0H9 118 aa1.27□□□□□ -2.21
TSPAN8-205ENST00000550818 CST11Q9H112 138 aa1.27□□□□□ -2.21
TSPAN8-205ENST00000550818 CYSTM1Q9H1C7 97 aa1.27□□□□□ -2.21
TSPAN8-205ENST00000550818 EXPH5Q8NEV8 1989 aa1.27□□□□□ -2.21
TSPAN8-205ENST00000550818 PCDH15Q96QU1 1955 aa1.27□□□□□ -2.21
TSPAN8-205ENST00000550818 TRPM7Q96QT4 1865 aa1.26□□□□□ -2.21
TSPAN8-205ENST00000550818 PLXNA1Q9UIW2 1896 aa1.26□□□□□ -2.21
TSPAN8-205ENST00000550818 RGPD2P0DJD1 1756 aa1.26□□□□□ -2.21
TSPAN8-205ENST00000550818 SCN11AQ9UI33 1791 aa1.26□□□□□ -2.21
TSPAN8-205ENST00000550818 TNS1Q9HBL0 1735 aaKnown RBP1.26□□□□□ -2.21
TSPAN8-205ENST00000550818 TET3O43151 1660 aa1.26□□□□□ -2.21
TSPAN8-205ENST00000550818 CUX1P39880 1505 aa1.26□□□□□ -2.21
TSPAN8-205ENST00000550818 KCPQ6ZWJ8 1503 aa1.26□□□□□ -2.21
TSPAN8-205ENST00000550818 LMTK2Q8IWU2 1503 aa1.26□□□□□ -2.21
TSPAN8-205ENST00000550818 LRRC9Q6ZRR7 1453 aa1.26□□□□□ -2.21
TSPAN8-205ENST00000550818 RP1P56715 2156 aa1.26□□□□□ -2.21
TSPAN8-205ENST00000550818 IGKV2D-26A0A0A0MRZ7 120 aa1.26□□□□□ -2.21
TSPAN8-205ENST00000550818 TRAV17A0A0B4J275 112 aa1.26□□□□□ -2.21
TSPAN8-205ENST00000550818 TCRBV4S1A1TA0A5B7 111 aa1.26□□□□□ -2.21
TSPAN8-205ENST00000550818 M0R233 179 aa1.26□□□□□ -2.21
TSPAN8-205ENST00000550818 GNGT2O14610 69 aa1.26□□□□□ -2.21
TSPAN8-205ENST00000550818 CCL16O15467 120 aa1.26□□□□□ -2.21
TSPAN8-205ENST00000550818 CFDP00746 253 aaPredicted RBP1.26□□□□□ -2.21
TSPAN8-205ENST00000550818 LYNX1P0DP58 116 aa1.26□□□□□ -2.21
TSPAN8-205ENST00000550818 MGST1P10620 155 aaKnown RBP1.26□□□□□ -2.21
TSPAN8-205ENST00000550818 RHOHQ15669 191 aa1.26□□□□□ -2.21
TSPAN8-205ENST00000550818 C1orf134Q5TEV5 83 aa1.26□□□□□ -2.21
TSPAN8-205ENST00000550818 KRTAP26-1Q6PEX3 210 aa1.26□□□□□ -2.21
TSPAN8-205ENST00000550818 SERP2Q8N6R1 65 aa1.26□□□□□ -2.21
TSPAN8-205ENST00000550818 MUCL1Q96DR8 90 aa1.26□□□□□ -2.21
TSPAN8-205ENST00000550818 PMCHL2Q9BQD1 86 aa1.26□□□□□ -2.21
TSPAN8-205ENST00000550818 RGPD8O14715 1765 aaPredicted RBP1.26□□□□□ -2.21
TSPAN8-205ENST00000550818 RGPD5Q99666 1765 aa1.26□□□□□ -2.21
TSPAN8-205ENST00000550818 MON2Q7Z3U7 1717 aa1.26□□□□□ -2.21
TSPAN8-205ENST00000550818 MYO5CQ9NQX4 1742 aa1.26□□□□□ -2.21
TSPAN8-205ENST00000550818 SIPA1L2Q9P2F8 1722 aaPredicted RBP1.26□□□□□ -2.21
TSPAN8-205ENST00000550818 KIF14Q15058 1648 aa1.26□□□□□ -2.21
TSPAN8-205ENST00000550818 PREX2Q70Z35 1606 aa1.26□□□□□ -2.21
TSPAN8-205ENST00000550818 ABCA9Q8IUA7 1624 aa1.26□□□□□ -2.21
TSPAN8-205ENST00000550818 SETBP1Q9Y6X0 1596 aa1.25□□□□□ -2.21
TSPAN8-205ENST00000550818 MED13Q9UHV7 2174 aa1.25□□□□□ -2.21
TSPAN8-205ENST00000550818 ABCC1P33527 1531 aa1.25□□□□□ -2.21
TSPAN8-205ENST00000550818 UGGT2Q9NYU1 1516 aa1.25□□□□□ -2.21
TSPAN8-205ENST00000550818 HEATR1Q9H583 2144 aaKnown RBP1.25□□□□□ -2.21
TSPAN8-205ENST00000550818 ATP10BO94823 1461 aa1.25□□□□□ -2.21
TSPAN8-205ENST00000550818 NLRP1Q9C000 1473 aa1.25□□□□□ -2.21
TSPAN8-205ENST00000550818 HFM1A2PYH4 1435 aa1.25□□□□□ -2.21
TSPAN8-205ENST00000550818 RP1L1Q8IWN7 2480 aaPredicted RBP1.25□□□□□ -2.21
TSPAN8-205ENST00000550818 IGKV3D-7A0A0C4DH55 119 aa1.25□□□□□ -2.21
TSPAN8-205ENST00000550818 IGKV3OR2-268A0A0C4DH90 116 aa1.25□□□□□ -2.21
TSPAN8-205ENST00000550818 A0A1W2PPM0 123 aa1.25□□□□□ -2.21
TSPAN8-205ENST00000550818 hADV29S1A0JD25 119 aa1.25□□□□□ -2.21
TSPAN8-205ENST00000550818 NAP1L6A6NFF2 107 aa1.25□□□□□ -2.21
TSPAN8-205ENST00000550818 B4DSR2 109 aa1.25□□□□□ -2.21
TSPAN8-205ENST00000550818 NUPR1O60356 82 aa1.25□□□□□ -2.21
TSPAN8-205ENST00000550818 CXCL8P10145 99 aa1.25□□□□□ -2.21
TSPAN8-205ENST00000550818 ADCYAP1P18509 176 aa1.25□□□□□ -2.21
TSPAN8-205ENST00000550818 INSL4Q14641 139 aa1.25□□□□□ -2.21
TSPAN8-205ENST00000550818 C9orf116Q5BN46 136 aaPredicted RBP1.25□□□□□ -2.21
TSPAN8-205ENST00000550818 BVES-AS1Q5T3Y7 98 aa1.25□□□□□ -2.21
TSPAN8-205ENST00000550818 LINC00301Q8NCQ3 95 aa1.25□□□□□ -2.21
TSPAN8-205ENST00000550818 OR10AG1Q8NH19 301 aa1.25□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms