RNA–Protein interactions for RNA: ENST00000550771.5

CACNB3-218, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 4

Gene CACNB3, Length 586 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-218ENST00000550771 HLA-DQA1P01909 254 aa13.35□□□□□ -0.27
CACNB3-218ENST00000550771 SPANXN1Q5VSR9 72 aa13.35□□□□□ -0.27
CACNB3-218ENST00000550771 BAGE2Q86Y30 109 aa13.35□□□□□ -0.27
CACNB3-218ENST00000550771 PRR34Q9NV39 138 aa13.35□□□□□ -0.27
CACNB3-218ENST00000550771 FAT3Q8TDW7 4589 aa13.34□□□□□ -0.27
CACNB3-218ENST00000550771 PRSS1P07477 247 aa13.34□□□□□ -0.27
CACNB3-218ENST00000550771 RPL37AP61513 92 aaKnown RBP13.34□□□□□ -0.27
CACNB3-218ENST00000550771 NTM-AS1Q6ZSK4 140 aa13.34□□□□□ -0.27
CACNB3-218ENST00000550771 MBD3L1Q8WWY6 194 aa13.34□□□□□ -0.27
CACNB3-218ENST00000550771 SCO2A0A1W2PP80 73 aa13.33□□□□□ -0.28
CACNB3-218ENST00000550771 F5H697 171 aa13.33□□□□□ -0.28
CACNB3-218ENST00000550771 C9orf163Q8N9P6 203 aa13.33□□□□□ -0.28
CACNB3-218ENST00000550771 SFT2D1Q8WV19 159 aa13.33□□□□□ -0.28
CACNB3-218ENST00000550771 PFDN1O60925 122 aa13.32□□□□□ -0.28
CACNB3-218ENST00000550771 RBX1P62877 108 aa13.32□□□□□ -0.28
CACNB3-218ENST00000550771 KIF25-AS1Q9Y6Z4 181 aa13.32□□□□□ -0.28
CACNB3-218ENST00000550771 MUC21A0A0G2JKD1 596 aa13.31□□□□□ -0.28
CACNB3-218ENST00000550771 MUC21A0A140T8X8 626 aa13.31□□□□□ -0.28
CACNB3-218ENST00000550771 UMAD1C9J7I0 102 aa13.31□□□□□ -0.28
CACNB3-218ENST00000550771 SMIM17P0DL12 118 aa13.31□□□□□ -0.28
CACNB3-218ENST00000550771 KRTAP26-1Q6PEX3 210 aa13.31□□□□□ -0.28
CACNB3-218ENST00000550771 DERL1Q9BUN8 251 aa13.31□□□□□ -0.28
CACNB3-218ENST00000550771 TRBV25-1A0A075B6N4 114 aa13.3□□□□□ -0.28
CACNB3-218ENST00000550771 LINC00269Q8N2A0 174 aa13.3□□□□□ -0.28
CACNB3-218ENST00000550771 FAM213BQ8TBF2 198 aa13.3□□□□□ -0.28
CACNB3-218ENST00000550771 AP1S3Q96PC3 154 aa13.3□□□□□ -0.28
CACNB3-218ENST00000550771 GAGE6Q13070 117 aa13.29□□□□□ -0.28
CACNB3-218ENST00000550771 ZNF345Q14585 488 aa13.29□□□□□ -0.28
CACNB3-218ENST00000550771 IQCJQ1A5X6 159 aa13.29□□□□□ -0.28
CACNB3-218ENST00000550771 CLRN3Q8NCR9 226 aa13.29□□□□□ -0.28
CACNB3-218ENST00000550771 DAZAP1Q96EP5 407 aaKnown RBP13.29□□□□□ -0.28
CACNB3-218ENST00000550771 HMCN2Q8NDA2 5059 aa13.28□□□□□ -0.28
CACNB3-218ENST00000550771 CLPSL2Q6UWE3 100 aa13.28□□□□□ -0.28
CACNB3-218ENST00000550771 TMUB2Q71RG4 321 aa13.28□□□□□ -0.28
CACNB3-218ENST00000550771 KCNRGQ8N5I3 272 aa13.28□□□□□ -0.28
CACNB3-218ENST00000550771 PLA2G2DQ9UNK4 145 aa13.28□□□□□ -0.28
CACNB3-218ENST00000550771 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.28□□□□□ -0.28
CACNB3-218ENST00000550771 A0A1B0GV50 99 aa13.27□□□□□ -0.29
CACNB3-218ENST00000550771 HNRNPA3P51991 378 aaKnown RBP13.27□□□□□ -0.29
CACNB3-218ENST00000550771 SSTP61278 116 aa13.27□□□□□ -0.29
CACNB3-218ENST00000550771 SDIM1Q6ZPB5 146 aa13.27□□□□□ -0.29
CACNB3-218ENST00000550771 PKHD1L1Q86WI1 4243 aa13.26□□□□□ -0.29
CACNB3-218ENST00000550771 IGHV1-24A0A0C4DH33 117 aa13.26□□□□□ -0.29
CACNB3-218ENST00000550771 H7C1H1 209 aa13.25□□□□□ -0.29
CACNB3-218ENST00000550771 M0QY20 66 aa13.25□□□□□ -0.29
CACNB3-218ENST00000550771 RPL35P42766 123 aaKnown RBP13.25□□□□□ -0.29
CACNB3-218ENST00000550771 REG3AQ06141 175 aa13.25□□□□□ -0.29
CACNB3-218ENST00000550771 SMLR1H3BR10 107 aa13.24□□□□□ -0.29
CACNB3-218ENST00000550771 H2AFB1P0C5Y9 115 aa13.24□□□□□ -0.29
CACNB3-218ENST00000550771 CNBPP62633 177 aaKnown RBP13.24□□□□□ -0.29
CACNB3-218ENST00000550771 TRAV8-4A0A0B4J246 113 aa13.23□□□□□ -0.29
CACNB3-218ENST00000550771 PANO1I0J062 215 aa13.23□□□□□ -0.29
CACNB3-218ENST00000550771 P01737 135 aa13.23□□□□□ -0.29
CACNB3-218ENST00000550771 A0A1B0GUV1 79 aa13.22□□□□□ -0.29
CACNB3-218ENST00000550771 MGPP08493 103 aa13.22□□□□□ -0.29
CACNB3-218ENST00000550771 IGLC6P0CF74 106 aa13.22□□□□□ -0.29
CACNB3-218ENST00000550771 CIRBPQ14011 172 aaKnown RBP13.22□□□□□ -0.29
CACNB3-218ENST00000550771 FER1L6-AS1Q8NA97 138 aa13.22□□□□□ -0.29
CACNB3-218ENST00000550771 C20orf203Q8NBC4 194 aa13.22□□□□□ -0.29
CACNB3-218ENST00000550771 C11orf52Q96A22 123 aa13.22□□□□□ -0.29
CACNB3-218ENST00000550771 IGLV10-54A0A075B6I4 117 aa13.21□□□□□ -0.29
CACNB3-218ENST00000550771 A0A0D9SG52 128 aa13.21□□□□□ -0.29
CACNB3-218ENST00000550771 HMSDA8MTL9 139 aa13.21□□□□□ -0.29
CACNB3-218ENST00000550771 RPS20P60866 119 aaKnown RBP13.21□□□□□ -0.29
CACNB3-218ENST00000550771 CACNG7P62955 275 aa13.21□□□□□ -0.29
CACNB3-218ENST00000550771 SUMO4Q6EEV6 95 aa13.21□□□□□ -0.29
CACNB3-218ENST00000550771 hDV102S1A0JD36 115 aa13.2□□□□□ -0.3
CACNB3-218ENST00000550771 GZMBP10144 247 aa13.2□□□□□ -0.3
CACNB3-218ENST00000550771 TMEM243Q9BU79 118 aa13.2□□□□□ -0.3
CACNB3-218ENST00000550771 TPPP3Q9BW30 176 aa13.2□□□□□ -0.3
CACNB3-218ENST00000550771 MANBALQ9NQG1 85 aa13.2□□□□□ -0.3
CACNB3-218ENST00000550771 KANTRA0A1W2PQU2 76 aa13.19□□□□□ -0.3
CACNB3-218ENST00000550771 BCL2L11O43521 198 aa13.19□□□□□ -0.3
CACNB3-218ENST00000550771 EIF5AP63241 154 aaKnown RBP13.19□□□□□ -0.3
CACNB3-218ENST00000550771 CENPWQ5EE01 88 aa13.19□□□□□ -0.3
CACNB3-218ENST00000550771 Q6ZRU5 148 aa13.19□□□□□ -0.3
CACNB3-218ENST00000550771 OR2D3Q8NGH3 330 aa13.19□□□□□ -0.3
CACNB3-218ENST00000550771 NKX2-5P52952 324 aaPredicted RBP13.18□□□□□ -0.3
CACNB3-218ENST00000550771 RASL11AQ6T310 242 aa13.18□□□□□ -0.3
CACNB3-218ENST00000550771 SMIM12Q96EX1 92 aa13.18□□□□□ -0.3
CACNB3-218ENST00000550771 PGLYRP4Q96LB8 373 aa13.18□□□□□ -0.3
CACNB3-218ENST00000550771 AP5S1Q9NUS5 200 aa13.18□□□□□ -0.3
CACNB3-218ENST00000550771 IGLV4-60A0A075B6I1 120 aa13.17□□□□□ -0.3
CACNB3-218ENST00000550771 IGHV3-64A0A075B6Q5 118 aa13.17□□□□□ -0.3
CACNB3-218ENST00000550771 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.17□□□□□ -0.3
CACNB3-218ENST00000550771 C19orf71A6NCJ1 209 aa13.17□□□□□ -0.3
CACNB3-218ENST00000550771 F2Z2F3 143 aa13.17□□□□□ -0.3
CACNB3-218ENST00000550771 RNF185Q96GF1 192 aa13.17□□□□□ -0.3
CACNB3-218ENST00000550771 GNG13Q9P2W3 67 aa13.17□□□□□ -0.3
CACNB3-218ENST00000550771 TRAV1-1A0A0B4J248 108 aa13.16□□□□□ -0.3
CACNB3-218ENST00000550771 XKRY2A2RUG3 117 aa13.16□□□□□ -0.3
CACNB3-218ENST00000550771 TRGC1P0CF51 173 aa13.16□□□□□ -0.3
CACNB3-218ENST00000550771 MT1HL1P0DM35 61 aa13.16□□□□□ -0.3
CACNB3-218ENST00000550771 GFRA4Q9GZZ7 299 aa13.16□□□□□ -0.3
CACNB3-218ENST00000550771 NIT2Q9NQR4 276 aa13.16□□□□□ -0.3
CACNB3-218ENST00000550771 SLPIP03973 132 aa13.15□□□□□ -0.3
CACNB3-218ENST00000550771 CCL20P78556 96 aa13.15□□□□□ -0.3
CACNB3-218ENST00000550771 Q6ZNX1 250 aa13.14□□□□□ -0.31
CACNB3-218ENST00000550771 DPH3P1Q9H4G8 78 aa13.14□□□□□ -0.31
CACNB3-218ENST00000550771 A0A087WYN8 130 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms