RNA–Protein interactions for RNA: ENST00000550519.5

SMARCC2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-210ENST00000550519 DGAT2L7PQ6IED9 249 aa14□□□□□ -0.17
SMARCC2-210ENST00000550519 SREK1IP1Q8N9Q2 155 aaPredicted RBP14□□□□□ -0.17
SMARCC2-210ENST00000550519 BATF3Q9NR55 127 aa14□□□□□ -0.17
SMARCC2-210ENST00000550519 PRR34Q9NV39 138 aa14□□□□□ -0.17
SMARCC2-210ENST00000550519 RPL37AP61513 92 aaKnown RBP13.99□□□□□ -0.17
SMARCC2-210ENST00000550519 TMEM97Q5BJF2 176 aa13.99□□□□□ -0.17
SMARCC2-210ENST00000550519 C9orf163Q8N9P6 203 aa13.99□□□□□ -0.17
SMARCC2-210ENST00000550519 MUC21A0A0G2JKD1 596 aa13.98□□□□□ -0.17
SMARCC2-210ENST00000550519 MUC21A0A140T8X8 626 aa13.98□□□□□ -0.17
SMARCC2-210ENST00000550519 SCO2A0A1W2PP80 73 aa13.98□□□□□ -0.17
SMARCC2-210ENST00000550519 SPANXN1Q5VSR9 72 aa13.98□□□□□ -0.17
SMARCC2-210ENST00000550519 KRTAP26-1Q6PEX3 210 aa13.98□□□□□ -0.17
SMARCC2-210ENST00000550519 BAGE2Q86Y30 109 aa13.98□□□□□ -0.17
SMARCC2-210ENST00000550519 MBD3L1Q8WWY6 194 aa13.98□□□□□ -0.17
SMARCC2-210ENST00000550519 KIF25-AS1Q9Y6Z4 181 aa13.98□□□□□ -0.17
SMARCC2-210ENST00000550519 F5H697 171 aa13.97□□□□□ -0.17
SMARCC2-210ENST00000550519 RBX1P62877 108 aa13.97□□□□□ -0.17
SMARCC2-210ENST00000550519 SFT2D1Q8WV19 159 aa13.97□□□□□ -0.17
SMARCC2-210ENST00000550519 PKHD1L1Q86WI1 4243 aa13.96□□□□□ -0.17
SMARCC2-210ENST00000550519 HNRNPA3P51991 378 aaKnown RBP13.96□□□□□ -0.17
SMARCC2-210ENST00000550519 DAZAP1Q96EP5 407 aaKnown RBP13.96□□□□□ -0.17
SMARCC2-210ENST00000550519 LINC00269Q8N2A0 174 aa13.95□□□□□ -0.18
SMARCC2-210ENST00000550519 DERL1Q9BUN8 251 aa13.95□□□□□ -0.18
SMARCC2-210ENST00000550519 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.95□□□□□ -0.18
SMARCC2-210ENST00000550519 UBR4Q5T4S7 5183 aa13.94□□□□□ -0.18
SMARCC2-210ENST00000550519 GAGE6Q13070 117 aa13.94□□□□□ -0.18
SMARCC2-210ENST00000550519 CLPSL2Q6UWE3 100 aa13.94□□□□□ -0.18
SMARCC2-210ENST00000550519 FAM213BQ8TBF2 198 aa13.94□□□□□ -0.18
SMARCC2-210ENST00000550519 TRBV25-1A0A075B6N4 114 aa13.93□□□□□ -0.18
SMARCC2-210ENST00000550519 UMAD1C9J7I0 102 aa13.93□□□□□ -0.18
SMARCC2-210ENST00000550519 PFDN1O60925 122 aa13.93□□□□□ -0.18
SMARCC2-210ENST00000550519 SSTP61278 116 aa13.93□□□□□ -0.18
SMARCC2-210ENST00000550519 IQCJQ1A5X6 159 aa13.93□□□□□ -0.18
SMARCC2-210ENST00000550519 SDIM1Q6ZPB5 146 aa13.93□□□□□ -0.18
SMARCC2-210ENST00000550519 TMUB2Q71RG4 321 aa13.93□□□□□ -0.18
SMARCC2-210ENST00000550519 AP1S3Q96PC3 154 aa13.93□□□□□ -0.18
SMARCC2-210ENST00000550519 A0A1B0GV50 99 aa13.92□□□□□ -0.18
SMARCC2-210ENST00000550519 PANO1I0J062 215 aa13.92□□□□□ -0.18
SMARCC2-210ENST00000550519 SMIM17P0DL12 118 aa13.92□□□□□ -0.18
SMARCC2-210ENST00000550519 KCNRGQ8N5I3 272 aa13.92□□□□□ -0.18
SMARCC2-210ENST00000550519 PLA2G2DQ9UNK4 145 aa13.92□□□□□ -0.18
SMARCC2-210ENST00000550519 ZNF345Q14585 488 aa13.91□□□□□ -0.18
SMARCC2-210ENST00000550519 CLRN3Q8NCR9 226 aa13.91□□□□□ -0.18
SMARCC2-210ENST00000550519 SMLR1H3BR10 107 aa13.9□□□□□ -0.18
SMARCC2-210ENST00000550519 M0QY20 66 aa13.9□□□□□ -0.18
SMARCC2-210ENST00000550519 IGHV1-24A0A0C4DH33 117 aa13.89□□□□□ -0.19
SMARCC2-210ENST00000550519 REG3AQ06141 175 aa13.89□□□□□ -0.19
SMARCC2-210ENST00000550519 RPL35P42766 123 aaKnown RBP13.88□□□□□ -0.19
SMARCC2-210ENST00000550519 CNBPP62633 177 aaKnown RBP13.88□□□□□ -0.19
SMARCC2-210ENST00000550519 C20orf203Q8NBC4 194 aa13.88□□□□□ -0.19
SMARCC2-210ENST00000550519 IGLV10-54A0A075B6I4 117 aa13.87□□□□□ -0.19
SMARCC2-210ENST00000550519 H2AFB1P0C5Y9 115 aa13.87□□□□□ -0.19
SMARCC2-210ENST00000550519 IGLC6P0CF74 106 aa13.87□□□□□ -0.19
SMARCC2-210ENST00000550519 CIRBPQ14011 172 aaKnown RBP13.87□□□□□ -0.19
SMARCC2-210ENST00000550519 TRAV8-4A0A0B4J246 113 aa13.86□□□□□ -0.19
SMARCC2-210ENST00000550519 H7C1H1 209 aa13.86□□□□□ -0.19
SMARCC2-210ENST00000550519 P01737 135 aa13.86□□□□□ -0.19
SMARCC2-210ENST00000550519 A0A1B0GUV1 79 aa13.85□□□□□ -0.19
SMARCC2-210ENST00000550519 MGPP08493 103 aa13.85□□□□□ -0.19
SMARCC2-210ENST00000550519 GZMBP10144 247 aa13.85□□□□□ -0.19
SMARCC2-210ENST00000550519 SUMO4Q6EEV6 95 aa13.85□□□□□ -0.19
SMARCC2-210ENST00000550519 FER1L6-AS1Q8NA97 138 aa13.85□□□□□ -0.19
SMARCC2-210ENST00000550519 C11orf52Q96A22 123 aa13.85□□□□□ -0.19
SMARCC2-210ENST00000550519 HMSDA8MTL9 139 aa13.84□□□□□ -0.19
SMARCC2-210ENST00000550519 MT1HL1P0DM35 61 aa13.84□□□□□ -0.19
SMARCC2-210ENST00000550519 RGS21Q2M5E4 152 aa13.84□□□□□ -0.19
SMARCC2-210ENST00000550519 TPPP3Q9BW30 176 aa13.84□□□□□ -0.19
SMARCC2-210ENST00000550519 IGLV4-60A0A075B6I1 120 aa13.83□□□□□ -0.2
SMARCC2-210ENST00000550519 A0A0D9SG52 128 aa13.83□□□□□ -0.2
SMARCC2-210ENST00000550519 hDV102S1A0JD36 115 aa13.83□□□□□ -0.2
SMARCC2-210ENST00000550519 RPS20P60866 119 aaKnown RBP13.83□□□□□ -0.2
SMARCC2-210ENST00000550519 OR2D3Q8NGH3 330 aa13.83□□□□□ -0.2
SMARCC2-210ENST00000550519 TMEM243Q9BU79 118 aa13.83□□□□□ -0.2
SMARCC2-210ENST00000550519 GFRA4Q9GZZ7 299 aa13.83□□□□□ -0.2
SMARCC2-210ENST00000550519 C19orf71A6NCJ1 209 aa13.82□□□□□ -0.2
SMARCC2-210ENST00000550519 BCL2L11O43521 198 aa13.82□□□□□ -0.2
SMARCC2-210ENST00000550519 SLPIP03973 132 aa13.82□□□□□ -0.2
SMARCC2-210ENST00000550519 NKX2-5P52952 324 aaPredicted RBP13.82□□□□□ -0.2
SMARCC2-210ENST00000550519 CACNG7P62955 275 aa13.82□□□□□ -0.2
SMARCC2-210ENST00000550519 CCL20P78556 96 aa13.82□□□□□ -0.2
SMARCC2-210ENST00000550519 Q6ZRU5 148 aa13.82□□□□□ -0.2
SMARCC2-210ENST00000550519 MANBALQ9NQG1 85 aa13.82□□□□□ -0.2
SMARCC2-210ENST00000550519 KANTRA0A1W2PQU2 76 aa13.81□□□□□ -0.2
SMARCC2-210ENST00000550519 CENPWQ5EE01 88 aa13.81□□□□□ -0.2
SMARCC2-210ENST00000550519 RASL11AQ6T310 242 aa13.81□□□□□ -0.2
SMARCC2-210ENST00000550519 PGLYRP4Q96LB8 373 aa13.81□□□□□ -0.2
SMARCC2-210ENST00000550519 GNG13Q9P2W3 67 aa13.81□□□□□ -0.2
SMARCC2-210ENST00000550519 IGHV3-64A0A075B6Q5 118 aa13.8□□□□□ -0.2
SMARCC2-210ENST00000550519 RNF185Q96GF1 192 aa13.8□□□□□ -0.2
SMARCC2-210ENST00000550519 F2Z2F3 143 aa13.79□□□□□ -0.2
SMARCC2-210ENST00000550519 EIF5AP63241 154 aaKnown RBP13.79□□□□□ -0.2
SMARCC2-210ENST00000550519 NIT2Q9NQR4 276 aa13.79□□□□□ -0.2
SMARCC2-210ENST00000550519 AP5S1Q9NUS5 200 aa13.79□□□□□ -0.2
SMARCC2-210ENST00000550519 A0A087WYN8 130 aa13.78□□□□□ -0.2
SMARCC2-210ENST00000550519 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.78□□□□□ -0.2
SMARCC2-210ENST00000550519 TRAV1-1A0A0B4J248 108 aa13.78□□□□□ -0.2
SMARCC2-210ENST00000550519 SMIM12Q96EX1 92 aa13.78□□□□□ -0.2
SMARCC2-210ENST00000550519 TRGC1P0CF51 173 aa13.77□□□□□ -0.21
SMARCC2-210ENST00000550519 CHTF8P0CG12 524 aa13.77□□□□□ -0.21
SMARCC2-210ENST00000550519 RAB5CP51148 216 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms