RNA–Protein interactions for RNA: ENST00000549064.1

LIMA1-204, Transcript of LIM domain and actin binding 1, humanhuman

TSL 2

Gene LIMA1, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-204ENST00000549064 ANKRD20A5PA0PJZ0 165 aa3.97□□□□□ -1.77
LIMA1-204ENST00000549064 TMEM262E9PQX1 116 aa3.97□□□□□ -1.77
LIMA1-204ENST00000549064 SFT2D2O95562 160 aa3.97□□□□□ -1.77
LIMA1-204ENST00000549064 CNBPP62633 177 aaKnown RBP3.97□□□□□ -1.77
LIMA1-204ENST00000549064 CXCL6P80162 114 aa3.97□□□□□ -1.77
LIMA1-204ENST00000549064 PPP1R1AQ13522 171 aa3.97□□□□□ -1.77
LIMA1-204ENST00000549064 MPV17L2Q567V2 206 aa3.97□□□□□ -1.77
LIMA1-204ENST00000549064 TMEM128Q5BJH2 165 aa3.97□□□□□ -1.77
LIMA1-204ENST00000549064 GCSAMLQ5JQS6 135 aa3.97□□□□□ -1.77
LIMA1-204ENST00000549064 C12orf45Q8N5I9 185 aaPredicted RBP3.97□□□□□ -1.77
LIMA1-204ENST00000549064 PGLYRP4Q96LB8 373 aa3.97□□□□□ -1.77
LIMA1-204ENST00000549064 ATP5SQ99766 215 aa3.97□□□□□ -1.77
LIMA1-204ENST00000549064 CHCHD7Q9BUK0 85 aa3.97□□□□□ -1.77
LIMA1-204ENST00000549064 SLC25A2Q9BXI2 301 aa3.97□□□□□ -1.77
LIMA1-204ENST00000549064 SLC39A9Q9NUM3 307 aa3.97□□□□□ -1.77
LIMA1-204ENST00000549064 TRAV21A0A0B4J279 112 aa3.96□□□□□ -1.78
LIMA1-204ENST00000549064 PIGBOS1A0A0B4J2F0 54 aa3.96□□□□□ -1.78
LIMA1-204ENST00000549064 IGKV2-24A0A0C4DH68 120 aa3.96□□□□□ -1.78
LIMA1-204ENST00000549064 TAAR5O14804 337 aa3.96□□□□□ -1.78
LIMA1-204ENST00000549064 ANGP03950 147 aaKnown RBP3.96□□□□□ -1.78
LIMA1-204ENST00000549064 NBEAP1P0C6P0 100 aa3.96□□□□□ -1.78
LIMA1-204ENST00000549064 COX6A2Q02221 97 aa3.96□□□□□ -1.78
LIMA1-204ENST00000549064 LCE1AQ5T7P2 110 aa3.96□□□□□ -1.78
LIMA1-204ENST00000549064 MIR17HGQ75NE6 70 aa3.96□□□□□ -1.78
LIMA1-204ENST00000549064 TMEM75Q8N9X5 138 aa3.96□□□□□ -1.78
LIMA1-204ENST00000549064 C15orf40Q8WUR7 153 aa3.96□□□□□ -1.78
LIMA1-204ENST00000549064 ASB13Q8WXK3 278 aa3.96□□□□□ -1.78
LIMA1-204ENST00000549064 TVP23CQ96ET8 276 aa3.96□□□□□ -1.78
LIMA1-204ENST00000549064 FAM167A-AS1Q96KT0 104 aa3.96□□□□□ -1.78
LIMA1-204ENST00000549064 VCX3BQ9H321 246 aa3.96□□□□□ -1.78
LIMA1-204ENST00000549064 TRAV26-2A0A0B4J265 109 aa3.95□□□□□ -1.78
LIMA1-204ENST00000549064 RBAKDNA6NC62 111 aa3.95□□□□□ -1.78
LIMA1-204ENST00000549064 FAM231BA6NCW3 169 aa3.95□□□□□ -1.78
LIMA1-204ENST00000549064 FAM24AA6NFZ4 105 aa3.95□□□□□ -1.78
LIMA1-204ENST00000549064 PPP1R2P9O14990 202 aa3.95□□□□□ -1.78
LIMA1-204ENST00000549064 TSPAN13O95857 204 aa3.95□□□□□ -1.78
LIMA1-204ENST00000549064 TCRBP04435 133 aa3.95□□□□□ -1.78
LIMA1-204ENST00000549064 RNASE3P12724 160 aaKnown RBP3.95□□□□□ -1.78
LIMA1-204ENST00000549064 CSN1S1P47710 185 aa3.95□□□□□ -1.78
LIMA1-204ENST00000549064 FGF8P55075 233 aaPredicted RBP3.95□□□□□ -1.78
LIMA1-204ENST00000549064 RANP62826 216 aaKnown RBP3.95□□□□□ -1.78
LIMA1-204ENST00000549064 MRPS10P82664 201 aaKnown RBP3.95□□□□□ -1.78
LIMA1-204ENST00000549064 OR2G3Q8NGZ4 309 aa3.95□□□□□ -1.78
LIMA1-204ENST00000549064 FXYD5Q96DB9 178 aa3.95□□□□□ -1.78
LIMA1-204ENST00000549064 KCNS1Q96KK3 526 aa3.95□□□□□ -1.78
LIMA1-204ENST00000549064 GGACTQ9BVM4 153 aa3.95□□□□□ -1.78
LIMA1-204ENST00000549064 LENEPQ9Y5L5 61 aa3.95□□□□□ -1.78
LIMA1-204ENST00000549064 IGLV10-54A0A075B6I4 117 aa3.94□□□□□ -1.78
LIMA1-204ENST00000549064 UBE2L5PA0A1B0GUS4 154 aa3.94□□□□□ -1.78
LIMA1-204ENST00000549064 C7orf66A4D0T2 115 aa3.94□□□□□ -1.78
LIMA1-204ENST00000549064 RGS5O15539 181 aa3.94□□□□□ -1.78
LIMA1-204ENST00000549064 CST7O76096 145 aa3.94□□□□□ -1.78
LIMA1-204ENST00000549064 BAXQ07812 192 aa3.94□□□□□ -1.78
LIMA1-204ENST00000549064 MIAQ16674 131 aa3.94□□□□□ -1.78
LIMA1-204ENST00000549064 LGALSLQ3ZCW2 172 aaPredicted RBP3.94□□□□□ -1.78
LIMA1-204ENST00000549064 C2orf66Q6UXQ4 117 aa3.94□□□□□ -1.78
LIMA1-204ENST00000549064 ZFP2Q6ZN57 461 aa3.94□□□□□ -1.78
LIMA1-204ENST00000549064 DYNC2LI1Q8TCX1 351 aa3.94□□□□□ -1.78
LIMA1-204ENST00000549064 AP3S1Q92572 193 aa3.94□□□□□ -1.78
LIMA1-204ENST00000549064 NAA50Q9GZZ1 169 aaKnown RBP3.94□□□□□ -1.78
LIMA1-204ENST00000549064 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.93□□□□□ -1.78
LIMA1-204ENST00000549064 A8MWV9 139 aa3.93□□□□□ -1.78
LIMA1-204ENST00000549064 ZNF80P51504 273 aaPredicted RBP3.93□□□□□ -1.78
LIMA1-204ENST00000549064 TAS2R30P59541 319 aa3.93□□□□□ -1.78
LIMA1-204ENST00000549064 CACNG7P62955 275 aa3.93□□□□□ -1.78
LIMA1-204ENST00000549064 MCFD2Q8NI22 146 aa3.93□□□□□ -1.78
LIMA1-204ENST00000549064 CHCHD10Q8WYQ3 142 aaPredicted RBP3.93□□□□□ -1.78
LIMA1-204ENST00000549064 PTH2Q96A98 100 aa3.93□□□□□ -1.78
LIMA1-204ENST00000549064 HYLS1Q96M11 299 aa3.93□□□□□ -1.78
LIMA1-204ENST00000549064 TREM1Q9NP99 234 aa3.93□□□□□ -1.78
LIMA1-204ENST00000549064 UQCC1Q9NVA1 299 aa3.93□□□□□ -1.78
LIMA1-204ENST00000549064 PSORS1C2Q9UIG4 136 aa3.93□□□□□ -1.78
LIMA1-204ENST00000549064 A0A096LNI7 61 aa3.92□□□□□ -1.78
LIMA1-204ENST00000549064 TRBV6-8A0A0A6YYG3 113 aa3.92□□□□□ -1.78
LIMA1-204ENST00000549064 NDUFS6O75380 124 aaKnown RBP3.92□□□□□ -1.78
LIMA1-204ENST00000549064 FGF7P21781 194 aa3.92□□□□□ -1.78
LIMA1-204ENST00000549064 BCAP31P51572 246 aa3.92□□□□□ -1.78
LIMA1-204ENST00000549064 UBE2D3P61077 147 aa3.92□□□□□ -1.78
LIMA1-204ENST00000549064 UBE2D2P62837 147 aa3.92□□□□□ -1.78
LIMA1-204ENST00000549064 FAM74A4Q5TZK3 123 aa3.92□□□□□ -1.78
LIMA1-204ENST00000549064 Q6ZN92 141 aa3.92□□□□□ -1.78
LIMA1-204ENST00000549064 GOLT1AQ6ZVE7 132 aa3.92□□□□□ -1.78
LIMA1-204ENST00000549064 LINC00269Q8N2A0 174 aa3.92□□□□□ -1.78
LIMA1-204ENST00000549064 ZNF664Q8N3J9 261 aa3.92□□□□□ -1.78
LIMA1-204ENST00000549064 DIRAS2Q96HU8 199 aa3.92□□□□□ -1.78
LIMA1-204ENST00000549064 NMES1Q9C002 83 aa3.92□□□□□ -1.78
LIMA1-204ENST00000549064 PRR34Q9NV39 138 aa3.92□□□□□ -1.78
LIMA1-204ENST00000549064 GSKIPQ9P0R6 139 aa3.92□□□□□ -1.78
LIMA1-204ENST00000549064 C9orf170A2RU37 121 aa3.91□□□□□ -1.78
LIMA1-204ENST00000549064 KRTAP16-1A8MUX0 517 aa3.91□□□□□ -1.78
LIMA1-204ENST00000549064 FAM25EA8MYX2 175 aa3.91□□□□□ -1.78
LIMA1-204ENST00000549064 OR7C2O60412 319 aa3.91□□□□□ -1.78
LIMA1-204ENST00000549064 EIF3GO75821 320 aaKnown RBP eCLIP3.91□□□□□ -1.78
LIMA1-204ENST00000549064 PTTG1O95997 202 aa3.91□□□□□ -1.78
LIMA1-204ENST00000549064 RAB5CP51148 216 aa3.91□□□□□ -1.78
LIMA1-204ENST00000549064 GNG5P63218 68 aa3.91□□□□□ -1.78
LIMA1-204ENST00000549064 IAH1Q2TAA2 248 aaPredicted RBP3.91□□□□□ -1.78
LIMA1-204ENST00000549064 KRTAP7-1Q8IUC3 87 aa3.91□□□□□ -1.78
LIMA1-204ENST00000549064 SLIRPQ9GZT3 109 aaKnown RBP3.91□□□□□ -1.78
LIMA1-204ENST00000549064 GFRA4Q9GZZ7 299 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms