RNA–Protein interactions for RNA: ENST00000548159.5

CNOT2-209, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 1 (best)

Gene CNOT2, Length 2,549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-209ENST00000548159 SONP18583 2426 aaKnown RBP11.85□□□□□ -0.51
CNOT2-209ENST00000548159 A0A1B0GWB2 263 aa11.85□□□□□ -0.51
CNOT2-209ENST00000548159 TMEM89A2RUT3 159 aa11.85□□□□□ -0.51
CNOT2-209ENST00000548159 LINC01619G3V211 115 aa11.85□□□□□ -0.51
CNOT2-209ENST00000548159 SLURP1P55000 103 aa11.85□□□□□ -0.51
CNOT2-209ENST00000548159 KRTAP10-9P60411 292 aa11.85□□□□□ -0.51
CNOT2-209ENST00000548159 RRN3P1Q2M238 152 aa11.85□□□□□ -0.51
CNOT2-209ENST00000548159 TCTEX1D4Q5JR98 221 aa11.85□□□□□ -0.51
CNOT2-209ENST00000548159 NIPBLQ6KC79 2804 aaeCLIP11.85□□□□□ -0.51
CNOT2-209ENST00000548159 SYT8Q8NBV8 401 aa11.85□□□□□ -0.51
CNOT2-209ENST00000548159 DUX3Q96PT4 197 aa11.85□□□□□ -0.51
CNOT2-209ENST00000548159 TIMM17AQ99595 171 aa11.85□□□□□ -0.51
CNOT2-209ENST00000548159 IGHV3-73A0A0B4J1V6 119 aa11.84□□□□□ -0.51
CNOT2-209ENST00000548159 SRSF9Q13242 221 aaKnown RBP eCLIP11.84□□□□□ -0.51
CNOT2-209ENST00000548159 Q6YL49 198 aa11.84□□□□□ -0.51
CNOT2-209ENST00000548159 PROK1P58294 105 aa11.84□□□□□ -0.51
CNOT2-209ENST00000548159 SFTA2Q6UW10 78 aa11.84□□□□□ -0.51
CNOT2-209ENST00000548159 TMEM141Q96I45 108 aa11.84□□□□□ -0.51
CNOT2-209ENST00000548159 UBE2E2Q96LR5 201 aa11.84□□□□□ -0.51
CNOT2-209ENST00000548159 ELANEP08246 267 aa11.83□□□□□ -0.52
CNOT2-209ENST00000548159 J3QLI3 93 aa11.83□□□□□ -0.52
CNOT2-209ENST00000548159 CR1P17927 2039 aa11.82□□□□□ -0.52
CNOT2-209ENST00000548159 APCP25054 2843 aa11.82□□□□□ -0.52
CNOT2-209ENST00000548159 NBPF19A0A087WUL8 3843 aa11.82□□□□□ -0.52
CNOT2-209ENST00000548159 A0A0J9YY99 117 aa11.82□□□□□ -0.52
CNOT2-209ENST00000548159 PGPEP1Q9NXJ5 209 aa11.82□□□□□ -0.52
CNOT2-209ENST00000548159 Q9UF83 564 aa11.82□□□□□ -0.52
CNOT2-209ENST00000548159 AKAP9Q99996 3911 aa11.82□□□□□ -0.52
CNOT2-209ENST00000548159 IGHV4-31P0DP07 118 aa11.82□□□□□ -0.52
CNOT2-209ENST00000548159 DEFB131AP59861 70 aa11.82□□□□□ -0.52
CNOT2-209ENST00000548159 SETD2Q9BYW2 2564 aaPredicted RBP11.81□□□□□ -0.52
CNOT2-209ENST00000548159 LINC01549A6NIU2 74 aa11.81□□□□□ -0.52
CNOT2-209ENST00000548159 FSHBP01225 129 aa11.81□□□□□ -0.52
CNOT2-209ENST00000548159 SH2D6Q7Z4S9 175 aa11.81□□□□□ -0.52
CNOT2-209ENST00000548159 BBC3Q96PG8 261 aaPredicted RBP11.81□□□□□ -0.52
CNOT2-209ENST00000548159 TRPT1Q86TN4 253 aaKnown RBP11.81□□□□□ -0.52
CNOT2-209ENST00000548159 PAPPA-AS1Q5QFB9 102 aa11.8□□□□□ -0.52
CNOT2-209ENST00000548159 RBMY1BA6NDE4 496 aaKnown RBP11.8□□□□□ -0.52
CNOT2-209ENST00000548159 RBMY1EA6NEQ0 496 aaKnown RBP11.8□□□□□ -0.52
CNOT2-209ENST00000548159 APOMO95445 188 aa11.8□□□□□ -0.52
CNOT2-209ENST00000548159 RBMY1DP0C7P1 496 aaKnown RBP11.8□□□□□ -0.52
CNOT2-209ENST00000548159 HERVK_113P61574 105 aa11.8□□□□□ -0.52
CNOT2-209ENST00000548159 ETDBQ3ZM63 59 aa11.8□□□□□ -0.52
CNOT2-209ENST00000548159 AMELXQ99217 191 aa11.8□□□□□ -0.52
CNOT2-209ENST00000548159 MRPL16Q9NX20 251 aaKnown RBP11.8□□□□□ -0.52
CNOT2-209ENST00000548159 WNK1Q9H4A3 2382 aa11.79□□□□□ -0.52
CNOT2-209ENST00000548159 IGHV3-64A0A075B6Q5 118 aa11.79□□□□□ -0.52
CNOT2-209ENST00000548159 UBE2D1P51668 147 aa11.79□□□□□ -0.52
CNOT2-209ENST00000548159 NSUN5P1Q3KNT7 163 aa11.79□□□□□ -0.52
CNOT2-209ENST00000548159 C20orf203Q8NBC4 194 aa11.79□□□□□ -0.52
CNOT2-209ENST00000548159 F8W1H4 67 aa11.79□□□□□ -0.52
CNOT2-209ENST00000548159 I3L3M4 83 aa11.78□□□□□ -0.52
CNOT2-209ENST00000548159 SPANXB1Q9NS25 103 aaPredicted RBP11.78□□□□□ -0.52
CNOT2-209ENST00000548159 TMEM61Q8N0U2 210 aa11.78□□□□□ -0.52
CNOT2-209ENST00000548159 RNF152Q8N8N0 203 aa11.78□□□□□ -0.52
CNOT2-209ENST00000548159 PRO0461Q9UI25 63 aa11.78□□□□□ -0.52
CNOT2-209ENST00000548159 PRRC2AP48634 2157 aaKnown RBP11.77□□□□□ -0.52
CNOT2-209ENST00000548159 TRGV11A0A075B6L2 103 aa11.77□□□□□ -0.53
CNOT2-209ENST00000548159 J3QQQ9 107 aa11.77□□□□□ -0.53
CNOT2-209ENST00000548159 CEMP1Q6PRD7 247 aaPredicted RBP11.77□□□□□ -0.53
CNOT2-209ENST00000548159 NACAE9PAV3 2078 aa11.77□□□□□ -0.53
CNOT2-209ENST00000548159 A0A0J9YXV3 536 aa11.77□□□□□ -0.53
CNOT2-209ENST00000548159 H3BMM0 161 aa11.77□□□□□ -0.53
CNOT2-209ENST00000548159 RHOHQ15669 191 aa11.77□□□□□ -0.53
CNOT2-209ENST00000548159 GAGE13Q4V321 117 aa11.77□□□□□ -0.53
CNOT2-209ENST00000548159 CCDC168Q8NDH2 2452 aa11.76□□□□□ -0.53
CNOT2-209ENST00000548159 TSPAN13O95857 204 aa11.76□□□□□ -0.53
CNOT2-209ENST00000548159 Q6ZSN1 163 aa11.76□□□□□ -0.53
CNOT2-209ENST00000548159 NFE4Q86UQ8 179 aa11.76□□□□□ -0.53
CNOT2-209ENST00000548159 NOTCH3Q9UM47 2321 aa11.76□□□□□ -0.53
CNOT2-209ENST00000548159 ITPR3Q14573 2671 aa11.76□□□□□ -0.53
CNOT2-209ENST00000548159 IGLV4-3A0A075B6K6 122 aa11.76□□□□□ -0.53
CNOT2-209ENST00000548159 IGHV3-30P01768 117 aa11.76□□□□□ -0.53
CNOT2-209ENST00000548159 IGHV3-30-5P0DP03 117 aa11.76□□□□□ -0.53
CNOT2-209ENST00000548159 KHDC1LQ5JSQ8 128 aa11.76□□□□□ -0.53
CNOT2-209ENST00000548159 SLC25A29Q8N8R3 303 aa11.76□□□□□ -0.53
CNOT2-209ENST00000548159 FAM104AQ969W3 186 aa11.76□□□□□ -0.53
CNOT2-209ENST00000548159 SPAG8Q99932 426 aaPredicted RBP11.76□□□□□ -0.53
CNOT2-209ENST00000548159 TMEM238LA0A1B0GVL6 79 aa11.75□□□□□ -0.53
CNOT2-209ENST00000548159 A6NJY4 79 aa11.75□□□□□ -0.53
CNOT2-209ENST00000548159 LOC107984156A0A0G2JMH3 177 aa11.75□□□□□ -0.53
CNOT2-209ENST00000548159 INSL3P51460 131 aa11.75□□□□□ -0.53
CNOT2-209ENST00000548159 RNASE13Q5GAN3 156 aaKnown RBP11.75□□□□□ -0.53
CNOT2-209ENST00000548159 NDUFA11Q86Y39 141 aa11.75□□□□□ -0.53
CNOT2-209ENST00000548159 ARL17AQ8IVW1 177 aa11.75□□□□□ -0.53
CNOT2-209ENST00000548159 TMEM223A0PJW6 202 aa11.74□□□□□ -0.53
CNOT2-209ENST00000548159 ZNF22P17026 224 aaPredicted RBP11.74□□□□□ -0.53
CNOT2-209ENST00000548159 DLX4Q92988 240 aaPredicted RBP11.74□□□□□ -0.53
CNOT2-209ENST00000548159 CFC1BP0CG36 223 aa11.74□□□□□ -0.53
CNOT2-209ENST00000548159 CFC1P0CG37 223 aa11.74□□□□□ -0.53
CNOT2-209ENST00000548159 VCX2Q9H322 139 aa11.74□□□□□ -0.53
CNOT2-209ENST00000548159 LGALS3P17931 250 aaKnown RBP11.73□□□□□ -0.53
CNOT2-209ENST00000548159 Q5PR19 223 aa11.73□□□□□ -0.53
CNOT2-209ENST00000548159 RHODO00212 210 aa11.73□□□□□ -0.53
CNOT2-209ENST00000548159 CD28P10747 220 aa11.71□□□□□ -0.53
CNOT2-209ENST00000548159 PSMB2P49721 201 aa11.71□□□□□ -0.53
CNOT2-209ENST00000548159 SMCPP49901 116 aaPredicted RBP11.71□□□□□ -0.53
CNOT2-209ENST00000548159 Q96MF0 132 aa11.71□□□□□ -0.53
CNOT2-209ENST00000548159 SPXQ9BT56 116 aa11.71□□□□□ -0.53
CNOT2-209ENST00000548159 ADARB2-AS1A8MUL3 147 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms