RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 OR1I1O60431 355 aa2.18□□□□□ -2.06
SCAF11-210ENST00000547654 SMIM24O75264 130 aa2.18□□□□□ -2.06
SCAF11-210ENST00000547654 P0C880 135 aa2.18□□□□□ -2.06
SCAF11-210ENST00000547654 TPT1P13693 172 aaKnown RBP2.18□□□□□ -2.06
SCAF11-210ENST00000547654 MIFP14174 115 aa2.18□□□□□ -2.06
SCAF11-210ENST00000547654 CRYGSP22914 178 aa2.18□□□□□ -2.06
SCAF11-210ENST00000547654 C7orf65Q6ZTY9 151 aa2.18□□□□□ -2.06
SCAF11-210ENST00000547654 Q8IYB0 196 aa2.18□□□□□ -2.06
SCAF11-210ENST00000547654 MMGT1Q8N4V1 131 aa2.18□□□□□ -2.06
SCAF11-210ENST00000547654 OR5A2Q8NGI9 324 aa2.18□□□□□ -2.06
SCAF11-210ENST00000547654 TENM3Q9P273 2699 aa2.18□□□□□ -2.06
SCAF11-210ENST00000547654 RP1P56715 2156 aa2.17□□□□□ -2.06
SCAF11-210ENST00000547654 MEIKINA0A087WXM9 373 aa2.17□□□□□ -2.06
SCAF11-210ENST00000547654 H3BRN7 92 aa2.17□□□□□ -2.06
SCAF11-210ENST00000547654 M0R233 179 aa2.17□□□□□ -2.06
SCAF11-210ENST00000547654 ZNF737O75373 536 aa2.17□□□□□ -2.06
SCAF11-210ENST00000547654 C1QCP02747 245 aa2.17□□□□□ -2.06
SCAF11-210ENST00000547654 ASAH2BP0C7U1 165 aa2.17□□□□□ -2.06
SCAF11-210ENST00000547654 FOXA3P55318 350 aaPredicted RBP2.17□□□□□ -2.06
SCAF11-210ENST00000547654 HES1Q14469 280 aa2.17□□□□□ -2.06
SCAF11-210ENST00000547654 ZNF846Q147U1 533 aa2.17□□□□□ -2.06
SCAF11-210ENST00000547654 ELOBQ15370 118 aa2.17□□□□□ -2.06
SCAF11-210ENST00000547654 Q5XG85 94 aa2.17□□□□□ -2.06
SCAF11-210ENST00000547654 RPL13AP3Q6NVV1 102 aa2.17□□□□□ -2.06
SCAF11-210ENST00000547654 LRRC18Q8N456 261 aa2.17□□□□□ -2.06
SCAF11-210ENST00000547654 C9orf163Q8N9P6 203 aa2.17□□□□□ -2.06
SCAF11-210ENST00000547654 DIRC1Q969H9 104 aa2.17□□□□□ -2.06
SCAF11-210ENST00000547654 OR5AC2Q9NZP5 309 aa2.17□□□□□ -2.06
SCAF11-210ENST00000547654 MYH10P35580 1976 aa2.17□□□□□ -2.06
SCAF11-210ENST00000547654 AKAP6Q13023 2319 aa2.17□□□□□ -2.06
SCAF11-210ENST00000547654 TPST1O60507 370 aa2.16□□□□□ -2.06
SCAF11-210ENST00000547654 SSR2P43308 183 aa2.16□□□□□ -2.06
SCAF11-210ENST00000547654 CDK6Q00534 326 aa2.16□□□□□ -2.06
SCAF11-210ENST00000547654 HSD17B12Q53GQ0 312 aa2.16□□□□□ -2.06
SCAF11-210ENST00000547654 MORN4Q8NDC4 146 aa2.16□□□□□ -2.06
SCAF11-210ENST00000547654 TMEM254Q8TBM7 123 aa2.16□□□□□ -2.06
SCAF11-210ENST00000547654 NAT14Q8WUY8 206 aa2.16□□□□□ -2.06
SCAF11-210ENST00000547654 POP5Q969H6 163 aaKnown RBP2.16□□□□□ -2.06
SCAF11-210ENST00000547654 TPRKBQ9Y3C4 175 aa2.16□□□□□ -2.06
SCAF11-210ENST00000547654 NUMA1Q14980 2115 aa2.15□□□□□ -2.06
SCAF11-210ENST00000547654 A0A096LPI6 279 aa2.15□□□□□ -2.07
SCAF11-210ENST00000547654 K7EP13 123 aa2.15□□□□□ -2.07
SCAF11-210ENST00000547654 K7ERU9 68 aa2.15□□□□□ -2.07
SCAF11-210ENST00000547654 UQCRQO14949 82 aa2.15□□□□□ -2.07
SCAF11-210ENST00000547654 IGKV4-1P06312 121 aa2.15□□□□□ -2.07
SCAF11-210ENST00000547654 FABP4P15090 132 aa2.15□□□□□ -2.07
SCAF11-210ENST00000547654 MAXP61244 160 aa2.15□□□□□ -2.07
SCAF11-210ENST00000547654 ZNF181Q2M3W8 571 aa2.15□□□□□ -2.07
SCAF11-210ENST00000547654 KRTAP21-2Q3LI59 83 aa2.15□□□□□ -2.07
SCAF11-210ENST00000547654 TMEM14EPQ6UXP3 125 aa2.15□□□□□ -2.07
SCAF11-210ENST00000547654 LINC00311Q8N616 119 aa2.15□□□□□ -2.07
SCAF11-210ENST00000547654 OR5D14Q8NGL3 314 aa2.15□□□□□ -2.07
SCAF11-210ENST00000547654 SFT2D1Q8WV19 159 aa2.15□□□□□ -2.07
SCAF11-210ENST00000547654 HYLS1Q96M11 299 aa2.15□□□□□ -2.07
SCAF11-210ENST00000547654 TP53RKQ96S44 253 aa2.15□□□□□ -2.07
SCAF11-210ENST00000547654 TTTY12Q9BZ98 90 aa2.15□□□□□ -2.07
SCAF11-210ENST00000547654 NIT2Q9NQR4 276 aa2.15□□□□□ -2.07
SCAF11-210ENST00000547654 DSPPQ9NZW4 1301 aa2.15□□□□□ -2.07
SCAF11-210ENST00000547654 MALRD1Q5VYJ5 2156 aa2.15□□□□□ -2.07
SCAF11-210ENST00000547654 MYOFQ9NZM1 2061 aa2.14□□□□□ -2.07
SCAF11-210ENST00000547654 MYH9P35579 1960 aaKnown RBP2.14□□□□□ -2.07
SCAF11-210ENST00000547654 CITO14578 2027 aa2.14□□□□□ -2.07
SCAF11-210ENST00000547654 HEATR5AQ86XA9 2040 aa2.14□□□□□ -2.07
SCAF11-210ENST00000547654 COL7A1Q02388 2944 aa2.14□□□□□ -2.07
SCAF11-210ENST00000547654 hDV103S1A0JD37 113 aa2.14□□□□□ -2.07
SCAF11-210ENST00000547654 HBDP02042 147 aa2.14□□□□□ -2.07
SCAF11-210ENST00000547654 CRPP02741 224 aa2.14□□□□□ -2.07
SCAF11-210ENST00000547654 TCRAP04437 139 aa2.14□□□□□ -2.07
SCAF11-210ENST00000547654 ROMO1P60602 79 aa2.14□□□□□ -2.07
SCAF11-210ENST00000547654 CIRBPQ14011 172 aaKnown RBP2.14□□□□□ -2.07
SCAF11-210ENST00000547654 HAGHLQ6PII5 290 aaPredicted RBP2.14□□□□□ -2.07
SCAF11-210ENST00000547654 RPS19BP1Q86WX3 136 aaKnown RBP2.14□□□□□ -2.07
SCAF11-210ENST00000547654 C1orf54Q8WWF1 131 aa2.14□□□□□ -2.07
SCAF11-210ENST00000547654 SMR3AQ99954 134 aa2.14□□□□□ -2.07
SCAF11-210ENST00000547654 BANF2Q9H503 90 aa2.14□□□□□ -2.07
SCAF11-210ENST00000547654 TAF9BQ9HBM6 251 aa2.14□□□□□ -2.07
SCAF11-210ENST00000547654 CNTRLQ7Z7A1 2325 aa2.13□□□□□ -2.07
SCAF11-210ENST00000547654 ANAPC1Q9H1A4 1944 aa2.13□□□□□ -2.07
SCAF11-210ENST00000547654 NCOA6Q14686 2063 aaPredicted RBP2.13□□□□□ -2.07
SCAF11-210ENST00000547654 FRAS1Q86XX4 4008 aa2.13□□□□□ -2.07
SCAF11-210ENST00000547654 TRAV14DV4A0A0A6YYC5 116 aa2.13□□□□□ -2.07
SCAF11-210ENST00000547654 TCRBV4S1A1TA0A5B7 111 aa2.13□□□□□ -2.07
SCAF11-210ENST00000547654 CCDC160A6NGH7 325 aa2.13□□□□□ -2.07
SCAF11-210ENST00000547654 CCL16O15467 120 aa2.13□□□□□ -2.07
SCAF11-210ENST00000547654 KDELR1P24390 212 aa2.13□□□□□ -2.07
SCAF11-210ENST00000547654 NCS1P62166 190 aa2.13□□□□□ -2.07
SCAF11-210ENST00000547654 SPCS2Q15005 226 aa2.13□□□□□ -2.07
SCAF11-210ENST00000547654 Q1T7F1 81 aa2.13□□□□□ -2.07
SCAF11-210ENST00000547654 KIAA2026Q5HYC2 2103 aa2.13□□□□□ -2.07
SCAF11-210ENST00000547654 C1orf134Q5TEV5 83 aa2.13□□□□□ -2.07
SCAF11-210ENST00000547654 CTAGE3PQ8IX95 158 aa2.13□□□□□ -2.07
SCAF11-210ENST00000547654 RAB37Q96AX2 223 aa2.13□□□□□ -2.07
SCAF11-210ENST00000547654 OR4C12Q96R67 309 aa2.13□□□□□ -2.07
SCAF11-210ENST00000547654 TXNDC17Q9BRA2 123 aa2.13□□□□□ -2.07
SCAF11-210ENST00000547654 TENM2Q9NT68 2774 aa2.13□□□□□ -2.07
SCAF11-210ENST00000547654 TRAV12-1A0A0B4J245 112 aa2.12□□□□□ -2.07
SCAF11-210ENST00000547654 LOC107986453A0A1B0GWG9 222 aa2.12□□□□□ -2.07
SCAF11-210ENST00000547654 TRACP01848 142 aa2.12□□□□□ -2.07
SCAF11-210ENST00000547654 SLC25A5P05141 298 aaKnown RBP2.12□□□□□ -2.07
SCAF11-210ENST00000547654 IGLC6P0CF74 106 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms