RNA–Protein interactions for RNA: ENST00000547247.5

SMARCD1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best)

Gene SMARCD1, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-203ENST00000547247 NEXN-AS1Q8NBZ9 246 aa16.02■□□□□ 0.16
SMARCD1-203ENST00000547247 ZNRF2Q8NHG8 242 aa16.02■□□□□ 0.16
SMARCD1-203ENST00000547247 ALMS1Q8TCU4 4167 aa16.01■□□□□ 0.15
SMARCD1-203ENST00000547247 TRBV7-3A0A075B6L6 115 aa16.01■□□□□ 0.15
SMARCD1-203ENST00000547247 LINC00694P0DN24 101 aa16.01■□□□□ 0.15
SMARCD1-203ENST00000547247 RASL11AQ6T310 242 aa16.01■□□□□ 0.15
SMARCD1-203ENST00000547247 AMN1Q8IY45 258 aa16.01■□□□□ 0.15
SMARCD1-203ENST00000547247 ATP6V0E2Q8NHE4 81 aa16.01■□□□□ 0.15
SMARCD1-203ENST00000547247 DNAH1Q9P2D7 4330 aa16.01■□□□□ 0.15
SMARCD1-203ENST00000547247 LYPD5Q6UWN5 251 aa16■□□□□ 0.15
SMARCD1-203ENST00000547247 RYR3Q15413 4870 aa16■□□□□ 0.15
SMARCD1-203ENST00000547247 TRAV9-1A0A075B6T8 112 aa16■□□□□ 0.15
SMARCD1-203ENST00000547247 TRAV26-2A0A0B4J265 109 aa16■□□□□ 0.15
SMARCD1-203ENST00000547247 RAB4AP20338 218 aa16■□□□□ 0.15
SMARCD1-203ENST00000547247 GATD1Q8NB37 220 aa16■□□□□ 0.15
SMARCD1-203ENST00000547247 FRZBQ92765 325 aa16■□□□□ 0.15
SMARCD1-203ENST00000547247 RNF185Q96GF1 192 aa16■□□□□ 0.15
SMARCD1-203ENST00000547247 LINC00588Q9Y4M8 146 aa16■□□□□ 0.15
SMARCD1-203ENST00000547247 URGCP-MRPS24S4R325 110 aa16■□□□□ 0.15
SMARCD1-203ENST00000547247 DNAJC30Q96LL9 226 aa15.99■□□□□ 0.15
SMARCD1-203ENST00000547247 NIT2Q9NQR4 276 aa15.99■□□□□ 0.15
SMARCD1-203ENST00000547247 FAM104BQ5XKR9 115 aa15.98■□□□□ 0.15
SMARCD1-203ENST00000547247 VPS13DQ5THJ4 4388 aa15.98■□□□□ 0.15
SMARCD1-203ENST00000547247 UBE2D3P61077 147 aa15.97■□□□□ 0.15
SMARCD1-203ENST00000547247 UBE2D2P62837 147 aa15.97■□□□□ 0.15
SMARCD1-203ENST00000547247 GTSF1LQ9H1H1 148 aa15.97■□□□□ 0.15
SMARCD1-203ENST00000547247 TNFRSF18Q9Y5U5 241 aa15.97■□□□□ 0.15
SMARCD1-203ENST00000547247 TIRAPP58753 221 aa15.96■□□□□ 0.15
SMARCD1-203ENST00000547247 MRAP2Q96G30 205 aa15.96■□□□□ 0.15
SMARCD1-203ENST00000547247 MRPS16Q9Y3D3 137 aaKnown RBP15.96■□□□□ 0.15
SMARCD1-203ENST00000547247 RYR2Q92736 4967 aa15.95■□□□□ 0.14
SMARCD1-203ENST00000547247 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.95■□□□□ 0.14
SMARCD1-203ENST00000547247 HYDINQ4G0P3 5121 aa15.94■□□□□ 0.14
SMARCD1-203ENST00000547247 ATRAIDQ6UW56 229 aa15.94■□□□□ 0.14
SMARCD1-203ENST00000547247 UPK3BQ9BT76 320 aa15.94■□□□□ 0.14
SMARCD1-203ENST00000547247 MRPL51Q4U2R6 128 aaKnown RBP15.93■□□□□ 0.14
SMARCD1-203ENST00000547247 RPL39LQ96EH5 51 aaKnown RBP15.93■□□□□ 0.14
SMARCD1-203ENST00000547247 DAZ4Q86SG3 579 aaKnown RBP15.92■□□□□ 0.14
SMARCD1-203ENST00000547247 DAZ3Q9NR90 486 aaKnown RBP15.92■□□□□ 0.14
SMARCD1-203ENST00000547247 IGHV3-38A0A0C4DH36 116 aa15.91■□□□□ 0.14
SMARCD1-203ENST00000547247 GAS8-AS1O95177 125 aa15.91■□□□□ 0.14
SMARCD1-203ENST00000547247 OR10J3Q5JRS4 329 aa15.91■□□□□ 0.14
SMARCD1-203ENST00000547247 LELP1Q5T871 98 aa15.91■□□□□ 0.14
SMARCD1-203ENST00000547247 CKS2P33552 79 aa15.9■□□□□ 0.14
SMARCD1-203ENST00000547247 SMKR1H3BMG3 65 aa15.89■□□□□ 0.13
SMARCD1-203ENST00000547247 NCR2O95944 276 aa15.89■□□□□ 0.13
SMARCD1-203ENST00000547247 Q9H8V8 135 aa15.89■□□□□ 0.13
SMARCD1-203ENST00000547247 TRBV6-5A0A0K0K1A5 114 aa15.88■□□□□ 0.13
SMARCD1-203ENST00000547247 PPP1R17O96001 155 aa15.88■□□□□ 0.13
SMARCD1-203ENST00000547247 RPS10P46783 165 aaKnown RBP15.88■□□□□ 0.13
SMARCD1-203ENST00000547247 ELOBQ15370 118 aa15.88■□□□□ 0.13
SMARCD1-203ENST00000547247 TRAV8-6A0A0B4J262 113 aa15.87■□□□□ 0.13
SMARCD1-203ENST00000547247 PPBPP02775 128 aa15.87■□□□□ 0.13
SMARCD1-203ENST00000547247 TMEM136Q6ZRR5 245 aa15.87■□□□□ 0.13
SMARCD1-203ENST00000547247 ST20Q9HBF5 79 aa15.87■□□□□ 0.13
SMARCD1-203ENST00000547247 SDHAF1A6NFY7 115 aa15.87■□□□□ 0.13
SMARCD1-203ENST00000547247 SIVA1O15304 175 aa15.87■□□□□ 0.13
SMARCD1-203ENST00000547247 COX19Q49B96 90 aa15.87■□□□□ 0.13
SMARCD1-203ENST00000547247 TMEM97Q5BJF2 176 aa15.87■□□□□ 0.13
SMARCD1-203ENST00000547247 D6R8Y8 96 aa15.86■□□□□ 0.13
SMARCD1-203ENST00000547247 NRACQ8N912 160 aa15.86■□□□□ 0.13
SMARCD1-203ENST00000547247 GNB1LQ9BYB4 327 aa15.86■□□□□ 0.13
SMARCD1-203ENST00000547247 TRBV24-1A0A075B6N3 115 aa15.85■□□□□ 0.13
SMARCD1-203ENST00000547247 TRBV6-8A0A0A6YYG3 113 aa15.85■□□□□ 0.13
SMARCD1-203ENST00000547247 TGIF2-C20orf24A0A0A6YYL0 155 aa15.85■□□□□ 0.13
SMARCD1-203ENST00000547247 HLA-DQA1P01909 254 aa15.85■□□□□ 0.13
SMARCD1-203ENST00000547247 WFDC10BQ8IUB3 73 aa15.85■□□□□ 0.13
SMARCD1-203ENST00000547247 SMCO4Q9NRQ5 59 aa15.85■□□□□ 0.13
SMARCD1-203ENST00000547247 IGLV2-18A0A075B6J9 118 aa15.84■□□□□ 0.13
SMARCD1-203ENST00000547247 ORMDL3Q8N138 153 aa15.84■□□□□ 0.13
SMARCD1-203ENST00000547247 TMEM70Q9BUB7 260 aa15.83■□□□□ 0.13
SMARCD1-203ENST00000547247 NTM-AS1Q6ZSK4 140 aa15.83■□□□□ 0.12
SMARCD1-203ENST00000547247 CBLN2Q8IUK8 224 aa15.83■□□□□ 0.12
SMARCD1-203ENST00000547247 KMT2AQ03164 3969 aa15.82■□□□□ 0.12
SMARCD1-203ENST00000547247 TNFRSF6BO95407 300 aa15.82■□□□□ 0.12
SMARCD1-203ENST00000547247 MT-ND6P03923 174 aa15.82■□□□□ 0.12
SMARCD1-203ENST00000547247 POLR2KP53803 58 aaKnown RBP15.82■□□□□ 0.12
SMARCD1-203ENST00000547247 SUMO2P61956 95 aaKnown RBP15.82■□□□□ 0.12
SMARCD1-203ENST00000547247 COTL1Q14019 142 aa15.82■□□□□ 0.12
SMARCD1-203ENST00000547247 PMCHP20382 165 aa15.81■□□□□ 0.12
SMARCD1-203ENST00000547247 PRELID3AQ96N28 172 aa15.81■□□□□ 0.12
SMARCD1-203ENST00000547247 C20orf78Q9BR46 151 aa15.81■□□□□ 0.12
SMARCD1-203ENST00000547247 TRBV25-1A0A075B6N4 114 aa15.8■□□□□ 0.12
SMARCD1-203ENST00000547247 I3L3M4 83 aa15.8■□□□□ 0.12
SMARCD1-203ENST00000547247 PHOX2AO14813 284 aa15.8■□□□□ 0.12
SMARCD1-203ENST00000547247 APCSP02743 223 aa15.8■□□□□ 0.12
SMARCD1-203ENST00000547247 DEFB104AQ8WTQ1 72 aa15.8■□□□□ 0.12
SMARCD1-203ENST00000547247 YPEL4Q96NS1 127 aa15.8■□□□□ 0.12
SMARCD1-203ENST00000547247 NPYP01303 97 aa15.79■□□□□ 0.12
SMARCD1-203ENST00000547247 DNAH10OSP0CZ25 163 aa15.79■□□□□ 0.12
SMARCD1-203ENST00000547247 IGHV1-24A0A0C4DH33 117 aa15.79■□□□□ 0.12
SMARCD1-203ENST00000547247 TRBV27A0A0K0K1C4 114 aa15.79■□□□□ 0.12
SMARCD1-203ENST00000547247 NBDYA0A0U1RRE5 68 aa15.79■□□□□ 0.12
SMARCD1-203ENST00000547247 M0R2N4 97 aa15.79■□□□□ 0.12
SMARCD1-203ENST00000547247 VCYO14598 125 aa15.79■□□□□ 0.12
SMARCD1-203ENST00000547247 IQCJQ1A5X6 159 aa15.79■□□□□ 0.12
SMARCD1-203ENST00000547247 LAMTOR2Q9Y2Q5 125 aa15.79■□□□□ 0.12
SMARCD1-203ENST00000547247 DNAH6Q9C0G6 4158 aa15.79■□□□□ 0.12
SMARCD1-203ENST00000547247 TTC32Q5I0X7 151 aa15.78■□□□□ 0.12
SMARCD1-203ENST00000547247 LINC01556Q5JQF7 62 aa15.77■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms