RNA–Protein interactions for RNA: ENST00000546803.5

CCDC38-203, Transcript of coiled-coil domain containing 38, humanhuman

TSL 4

Gene CCDC38, Length 511 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-203ENST00000546803 VPS13DQ5THJ4 4388 aa11.49□□□□□ -0.57
CCDC38-203ENST00000546803 TRAV9-2A0A087WT02 112 aa11.48□□□□□ -0.57
CCDC38-203ENST00000546803 BTF3P20290 206 aaKnown RBP11.48□□□□□ -0.57
CCDC38-203ENST00000546803 RASL11AQ6T310 242 aa11.48□□□□□ -0.57
CCDC38-203ENST00000546803 WFDC10BQ8IUB3 73 aa11.48□□□□□ -0.57
CCDC38-203ENST00000546803 FRZBQ92765 325 aa11.48□□□□□ -0.57
CCDC38-203ENST00000546803 ANAPC16Q96DE5 110 aa11.48□□□□□ -0.57
CCDC38-203ENST00000546803 SEC11CQ9BY50 192 aa11.48□□□□□ -0.57
CCDC38-203ENST00000546803 TMEM191AQ9H0A3 160 aa11.48□□□□□ -0.57
CCDC38-203ENST00000546803 IGHV3-38A0A0C4DH36 116 aa11.47□□□□□ -0.57
CCDC38-203ENST00000546803 DNAH10OSP0CZ25 163 aa11.47□□□□□ -0.57
CCDC38-203ENST00000546803 C1orf134Q5TEV5 83 aa11.47□□□□□ -0.57
CCDC38-203ENST00000546803 DAZ4Q86SG3 579 aaKnown RBP11.47□□□□□ -0.57
CCDC38-203ENST00000546803 DAZ3Q9NR90 486 aaKnown RBP11.47□□□□□ -0.57
CCDC38-203ENST00000546803 TNFRSF18Q9Y5U5 241 aa11.47□□□□□ -0.57
CCDC38-203ENST00000546803 A0A1B0GW15 77 aa11.46□□□□□ -0.57
CCDC38-203ENST00000546803 ADCYAP1P18509 176 aa11.46□□□□□ -0.57
CCDC38-203ENST00000546803 NIT2Q9NQR4 276 aa11.46□□□□□ -0.57
CCDC38-203ENST00000546803 RYR2Q92736 4967 aa11.45□□□□□ -0.58
CCDC38-203ENST00000546803 TMEM97Q5BJF2 176 aa11.45□□□□□ -0.58
CCDC38-203ENST00000546803 LINC01556Q5JQF7 62 aa11.45□□□□□ -0.58
CCDC38-203ENST00000546803 S100A8P05109 93 aa11.44□□□□□ -0.58
CCDC38-203ENST00000546803 LINC00336Q6ZUF6 198 aa11.44□□□□□ -0.58
CCDC38-203ENST00000546803 C6orf223Q8N319 242 aa11.44□□□□□ -0.58
CCDC38-203ENST00000546803 C10orf126Q8N4M7 172 aa11.44□□□□□ -0.58
CCDC38-203ENST00000546803 GATD1Q8NB37 220 aa11.44□□□□□ -0.58
CCDC38-203ENST00000546803 KRTAP1-5Q9BYS1 174 aa11.44□□□□□ -0.58
CCDC38-203ENST00000546803 RYR3Q15413 4870 aa11.43□□□□□ -0.58
CCDC38-203ENST00000546803 TRBV6-8A0A0A6YYG3 113 aa11.42□□□□□ -0.58
CCDC38-203ENST00000546803 TRAV26-2A0A0B4J265 109 aa11.42□□□□□ -0.58
CCDC38-203ENST00000546803 C10orf91Q5T1B1 145 aa11.42□□□□□ -0.58
CCDC38-203ENST00000546803 MRAP2Q96G30 205 aa11.42□□□□□ -0.58
CCDC38-203ENST00000546803 RTL8CO15255 209 aa11.41□□□□□ -0.58
CCDC38-203ENST00000546803 RAB4AP20338 218 aa11.41□□□□□ -0.58
CCDC38-203ENST00000546803 HBBP68871 147 aa11.41□□□□□ -0.58
CCDC38-203ENST00000546803 KCNIP4Q6PIL6 250 aa11.41□□□□□ -0.58
CCDC38-203ENST00000546803 ATP5L2Q7Z4Y8 100 aa11.41□□□□□ -0.58
CCDC38-203ENST00000546803 AMN1Q8IY45 258 aa11.41□□□□□ -0.58
CCDC38-203ENST00000546803 RNF185Q96GF1 192 aa11.41□□□□□ -0.58
CCDC38-203ENST00000546803 CTDSP1Q9GZU7 261 aa11.41□□□□□ -0.58
CCDC38-203ENST00000546803 CARHSP1Q9Y2V2 147 aaKnown RBP11.41□□□□□ -0.58
CCDC38-203ENST00000546803 A0A1B0GXF2 115 aa11.4□□□□□ -0.58
CCDC38-203ENST00000546803 CAMPP49913 170 aa11.4□□□□□ -0.58
CCDC38-203ENST00000546803 MRPL54Q6P161 138 aaKnown RBP11.4□□□□□ -0.58
CCDC38-203ENST00000546803 IMMP2LQ96T52 175 aa11.4□□□□□ -0.58
CCDC38-203ENST00000546803 KMT2AQ03164 3969 aa11.39□□□□□ -0.59
CCDC38-203ENST00000546803 FAM104BQ5XKR9 115 aa11.39□□□□□ -0.59
CCDC38-203ENST00000546803 CHCHD7Q9BUK0 85 aa11.39□□□□□ -0.59
CCDC38-203ENST00000546803 URGCP-MRPS24S4R325 110 aa11.39□□□□□ -0.59
CCDC38-203ENST00000546803 HYDINQ4G0P3 5121 aa11.39□□□□□ -0.59
CCDC38-203ENST00000546803 TRBV25-1A0A075B6N4 114 aa11.38□□□□□ -0.59
CCDC38-203ENST00000546803 TRBV6-5A0A0K0K1A5 114 aa11.38□□□□□ -0.59
CCDC38-203ENST00000546803 PPP1R17O96001 155 aa11.38□□□□□ -0.59
CCDC38-203ENST00000546803 IGHV3-30P01768 117 aa11.38□□□□□ -0.59
CCDC38-203ENST00000546803 IGHV3-33P01772 117 aa11.38□□□□□ -0.59
CCDC38-203ENST00000546803 IGHV3-30-3P0DP02 117 aa11.38□□□□□ -0.59
CCDC38-203ENST00000546803 IGHV3-30-5P0DP03 117 aa11.38□□□□□ -0.59
CCDC38-203ENST00000546803 PKIAP61925 76 aa11.38□□□□□ -0.59
CCDC38-203ENST00000546803 NTM-AS1Q6ZSK4 140 aa11.38□□□□□ -0.59
CCDC38-203ENST00000546803 NFE4Q86UQ8 179 aa11.38□□□□□ -0.59
CCDC38-203ENST00000546803 NIT1Q86X76 327 aa11.38□□□□□ -0.59
CCDC38-203ENST00000546803 RPL39LQ96EH5 51 aaKnown RBP11.38□□□□□ -0.59
CCDC38-203ENST00000546803 IBA57-AS1B1ANH7 110 aa11.37□□□□□ -0.59
CCDC38-203ENST00000546803 IQCJQ1A5X6 159 aa11.37□□□□□ -0.59
CCDC38-203ENST00000546803 BTF3L4Q96K17 158 aa11.37□□□□□ -0.59
CCDC38-203ENST00000546803 TMEM242Q9NWH2 141 aa11.37□□□□□ -0.59
CCDC38-203ENST00000546803 A0A087WX48 190 aa11.36□□□□□ -0.59
CCDC38-203ENST00000546803 IGHV1-24A0A0C4DH33 117 aa11.36□□□□□ -0.59
CCDC38-203ENST00000546803 PRSS29PA6NIE9 313 aa11.36□□□□□ -0.59
CCDC38-203ENST00000546803 COTL1Q14019 142 aa11.36□□□□□ -0.59
CCDC38-203ENST00000546803 CHCHD5Q9BSY4 110 aa11.36□□□□□ -0.59
CCDC38-203ENST00000546803 ST20Q9HBF5 79 aa11.36□□□□□ -0.59
CCDC38-203ENST00000546803 SDHAF1A6NFY7 115 aa11.35□□□□□ -0.59
CCDC38-203ENST00000546803 TMEM262E9PQX1 116 aa11.35□□□□□ -0.59
CCDC38-203ENST00000546803 LAGE3Q14657 143 aa11.35□□□□□ -0.59
CCDC38-203ENST00000546803 ELOBQ15370 118 aa11.35□□□□□ -0.59
CCDC38-203ENST00000546803 RHEBQ15382 184 aa11.35□□□□□ -0.59
CCDC38-203ENST00000546803 NDUFA5Q16718 116 aa11.35□□□□□ -0.59
CCDC38-203ENST00000546803 MRPL51Q4U2R6 128 aaKnown RBP11.35□□□□□ -0.59
CCDC38-203ENST00000546803 DNAH6Q9C0G6 4158 aa11.35□□□□□ -0.59
CCDC38-203ENST00000546803 TRAV9-1A0A075B6T8 112 aa11.34□□□□□ -0.59
CCDC38-203ENST00000546803 C7orf77A4D0Y5 90 aa11.34□□□□□ -0.59
CCDC38-203ENST00000546803 GAS8-AS1O95177 125 aa11.34□□□□□ -0.59
CCDC38-203ENST00000546803 NCR2O95944 276 aa11.34□□□□□ -0.59
CCDC38-203ENST00000546803 CLRN3Q8NCR9 226 aa11.34□□□□□ -0.59
CCDC38-203ENST00000546803 TMEM243Q9BU79 118 aa11.34□□□□□ -0.59
CCDC38-203ENST00000546803 I3L3M4 83 aa11.33□□□□□ -0.6
CCDC38-203ENST00000546803 PPBPP02775 128 aa11.33□□□□□ -0.6
CCDC38-203ENST00000546803 RPS10P46783 165 aaKnown RBP11.33□□□□□ -0.6
CCDC38-203ENST00000546803 Q8N3U1 123 aa11.33□□□□□ -0.6
CCDC38-203ENST00000546803 SMKR1H3BMG3 65 aa11.32□□□□□ -0.6
CCDC38-203ENST00000546803 PMCHP20382 165 aa11.32□□□□□ -0.6
CCDC38-203ENST00000546803 S100PP25815 95 aa11.32□□□□□ -0.6
CCDC38-203ENST00000546803 CKS2P33552 79 aa11.32□□□□□ -0.6
CCDC38-203ENST00000546803 AMTP48728 403 aa11.32□□□□□ -0.6
CCDC38-203ENST00000546803 POLR2KP53803 58 aaKnown RBP11.32□□□□□ -0.6
CCDC38-203ENST00000546803 Q6ZRN7 208 aaPredicted RBP11.32□□□□□ -0.6
CCDC38-203ENST00000546803 NRACQ8N912 160 aa11.32□□□□□ -0.6
CCDC38-203ENST00000546803 TMEM70Q9BUB7 260 aa11.32□□□□□ -0.6
CCDC38-203ENST00000546803 TRAV8-3A0A0A6YYJ7 113 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms